Agelaius tricolor (tricolored blackbird): 139597645
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Entry
139597645 CDS
T10815
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1 isoform X1
KO
K09444
interferon regulatory factor 1
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
139597645 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atrc03000
]
139597645 (IRF1)
Transcription factors [BR:
atrc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
139597645 (IRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
139597645
NCBI-ProteinID:
XP_071299263
LinkDB
All DBs
Position
Unknown
AA seq
317 aa
AA seq
DB search
MPVSRMRMRPWLEMQIDSNQIPGLIWINKDKRIFQIPWKHAAKHGWDMEKDACLFRSWAI
HTGRYKEGEKDPDPKTWKANFRCAMNSLPDIEEVKDKSINKGSSAVRVYRMLPPLTKHQK
KERKSKSSREARNKSKRKCYEETRLKESAESLTNTPLPDDHSGYTIHDYAGQEVEVESPA
ITLDLSSCEVSGSLSDWRPPMEVTMADSTNDLYQLQVSPLASSSEVTDEDEEEINQDILK
LLGPAQDWHSTNIGGKGFLTNESGTQSLCSTYGYKEQDGDIDTTSGEIDFRLYDQKNLDF
SWLDTVRPTMQVIPCGL
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtcaagaatgcgcatgaggccgtggttggaaatgcagattgattccaatcaa
atacctggactgatatggattaacaaggataagaggatctttcagatcccatggaaacat
gcagctaagcatggctgggacatggagaaggatgcctgccttttcaggagctgggccatt
cacacaggaaggtataaagaaggtgagaaagatcctgatccaaaaacctggaaggcaaat
ttccgctgtgccatgaattccctgcctgacattgaagaagtgaaagataaaagcatcaac
aagggctccagtgctgtcagggtttacaggatgctgccacccttgacaaagcaccagaag
aaagaaaggaagtcaaagtcttcaagagaggcaagaaacaagagcaagagaaagtgttat
gaagagacaaggctgaaagagtcagcagaaagcttaaccaacactcctctgccagatgac
cacagtggctacaccattcacgactatgcagggcaggaagtggaggtggagagcccagcc
atcaccttagacctgtcctcctgcgaggtgagcggctccctgagcgactggaggccgccg
atggaggtgaccatggctgacagcaccaacgacctctaccagctccaggtgtctcccctg
gcttcctcctcagaggtcacagacgaagatgaagaggaaataaatcaggatattttaaag
ctgcttggaccagcccaagactggcacagcaccaacattggggggaaaggctttctgacc
aacgagtcaggcacccagagcctgtgcagcacctacggatacaaggagcaggatggggac
attgacaccacatcaggagagatagatttcaggctctacgaccagaaaaacctagacttc
tcctggctggatacagtgaggccaaccatgcaagtcattccctgtggattgtaa
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