Agelaius tricolor (tricolored blackbird): 139597720
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Entry
139597720 CDS
T10815
Symbol
RNF130
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130 isoform X1
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atrc04121
]
139597720 (RNF130)
Enzymes [BR:
atrc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139597720 (RNF130)
Ubiquitin system [BR:
atrc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139597720 (RNF130)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
SP24
zf-ANAPC11
PspB
Prok-RING_4
EGF_Hmr-1
Motif
Other DBs
NCBI-GeneID:
139597720
NCBI-ProteinID:
XP_071299444
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MSWRWARQHWNGGSSVLLLLPLLLWHGRVRPAGADNASQAYYTALINVTVLSPERGGPTL
LRIDRGRYGQDSPKVEVKGLLVTPVPINGVADRLGCDPRTRFQVPPNTKQWIALLQRGNC
TFKEKILRAASHNATAVVIYNNVSSEEPVTMTHQGTGDIVAVMITESKVKEILNYLEKNI
SVLMAIAVGSRVPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTSARDRNQRR
LGDAAKKAIGKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKICVDP
WLSEHCTCPMCKLNILKALGIVPNVPCTDNIAFDMERLTRGQPASRRSALGDFGTESSLS
LEPLRTSGMSQLPQDGELTPRSGEINIAVTKEWFIIASFGLLSALTLCYMIIKATASLNA
NEQSLLPS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagctggcggtgggctcgccagcactggaacggcggctcctccgtgctgctgctgctg
ccgctgctgctgtggcacggccgggtccggccggccggcgccgacaacgccagccaggcg
tactacaccgcgctcatcaacgtgaccgtgctgagccccgagcgcggcggccccacgctg
ctgcggatcgaccgtggccgttacgggcaggactccccgaaggtggaggtcaaggggctg
ctggtgactcccgtccctatcaacggagttgcagatcgtctgggctgtgaccctcgaaca
cgtttccaggtcccaccaaacaccaagcagtggattgctttactacagagaggaaactgt
acatttaaagagaagatactgcgagcagcttcacataatgccacagctgtggtcatttac
aacaatgtatccagtgaagaacctgtcacaatgactcatcaaggaactggagacattgtt
gctgtcatgattacagaatcaaaggttaaggagatcctgaattacttggaaaagaacatc
tctgtcctgatggccatagcagtggggtcccgtgttcctccaaagaacttcagtcggggc
tctctagtctttgtgtcaatatcattcattgttttgatgatcatttcttcagcatggtta
atattttacttcatccagaagatcaggtacacaagtgcacgtgacaggaatcagcgtcgt
cttggagatgctgccaagaaagccattggtaaattgacaaccaggacagtaaagaagggt
gataaggaaacagacccagactttgatcattgtgctgtctgcattgaaagttacaagcag
aatgatgttgttcgcattttgccatgcaagcatgtattccacaaaatctgtgtggatcca
tggctcagtgagcactgtacatgtccaatgtgtaaactgaacattctgaaggcactggga
attgtgcccaacgtgccgtgcacagataacatcgcctttgacatggagaggctgacgcgg
gggcagccggcgagcaggcgctcggcgctcggcgacttcggcaccgagagctccctcagc
ctggagcccctgcgcacctcgggcatgtcacagctgccacaggacggggagctgacaccg
aggtcaggagagatcaacattgcagtgacaaaagaatggtttattattgccagttttggc
ctcctcagtgcccttacactctgctacatgatcatcaaagccacagctagcttgaatgct
aatgagcagtcacttcttccatcgtaa
DBGET
integrated database retrieval system
