Agelaius tricolor (tricolored blackbird): 139597814
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Entry
139597814 CDS
T10815
Symbol
PDLIM7
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ and LIM domain protein 7
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139597814 (PDLIM7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
atrc04990
]
139597814 (PDLIM7)
Domain-containing proteins not elsewhere classified [BR:
atrc04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
139597814 (PDLIM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
139597814
NCBI-ProteinID:
XP_071299645
LinkDB
All DBs
Position
Unknown
AA seq
894 aa
AA seq
DB search
MGDMESYKVMLNGPAPWGFRLQGGKDFSMPLSISRLTLGGKAAQAGVGVGDWVLYIDGES
TSAMTHIEAQNRIRACGDRLCLTLSRAQNQLGKPQKVLSLDKQPPQLLEPPSTPVCDPVK
LRMLEDIDDSKPPSWTSQSRSFRKLSRLVGADGMEDGEDELVKKPSHSGEAVCSVAVFSL
CLQELSCWWSCRAHXPQWALPELSHCSGFHLGRVLPGHTSQXQGVLCWVEPAGHCWHQAG
EAKLCHCFLRKRDLEKAGAQRTPCWXYWEVLGSSWTVCCEPGMGLQDSVDAHGSSWGTVE
QWXVPGQPLEPPSTPGCDPGKLRMLEDAEDWQPRTGTSQSRSFRKLAQLTGTDGMEDGED
EFIKKPRDAHGSNWGTGQHRQPPQALEPPSDTVCDPVKLRMLEDIVDSKPHTWTSQSRSF
RKLARLVGANSMDDGEDEPVKKPRLEVFSELHNGHCQHSVTALTVTSGGSCPKHPPGDSH
GSIWGIVEQREPLEPPSTPGCDPGKLRLMEDAEGWQPRTGTSQSRSFRRLAQLTGTDEME
DGEDQIVKKPRDTHGSSWGTVEQRQPPQPLEPPSTPGCSPGKLRLMEDAEDWQPRTGTSQ
SRTFHRLAQLTGTDSSMEDHDDVFVRKPSQVSVPDPSPGAAMKTEPGLAPRTPSATPSPT
SRPPWAVDPSFAERYAPDKTSTVVSKHSQPATPTPMQNRSSIVQAAQQAPEGPGRTPLCY
KCNKVIRGRYLVALGHYYHPEEFICCQCRKVLDEGGFFEEKGSIFCPKCYDTRYAPTCAK
CKKKITGEVMHALKMTWHVQCFTCNACKTPIRNRAFYMEEGQPYCERDYEKMFGTKCRGC
DFKIDAGDRFLEALGFSWHDTCFVCAICQTNLEGKTFYSKKDKPLCKSHAFSHV
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacatggagtcctacaaggtgatgctgaatgggccagcaccctggggcttcagg
ctgcagggagggaaggatttcagcatgccgctctccatctccaggctgactctgggtggg
aaggcagcccaggccggcgtgggagtgggcgactgggtgctgtacatcgacggggagagc
accagtgccatgacacacatcgaggcccagaacaggatccgtgcctgtggggacaggctc
tgcctcaccttgagcagagcccagaaccagctggggaagccgcagaaggtgctgagcctt
gacaagcagcccccacagctgctggagccccccagcacccccgtgtgtgaccctgtgaag
ctgcggatgttagaggacattgatgactcaaagccccccagctggacctcccagtcccgc
tccttccgcaaactgtcccgcctggtgggcgccgatggcatggaggatggtgaggacgag
cttgttaaaaagcccagtcactcaggggaagctgtttgctctgttgctgttttttctctc
tgtctccaagagttgagctgttggtggagctgcagagctcacnncccgcagtgggcactg
ccagagctcagccactgctctggcttccacctcgggagggtcctgccaggacacaccagc
cagnaacaaggtgtcctgtgctgggtagaacctgctgggcactgctggcaccaagctggg
gaggccaagctctgccattgcttcttgaggaagagggacctggagaaggctggtgcacag
agaacaccttgctggnggtattgggaggtgctaggcagcagctggacagtgtgctgtgag
cctggcatggggctgcaggacagtgtggatgcccatgggtccagctggggcacagtggag
cagtggtgagtgccagggcagcctctggagccccccagcacccccgggtgtgatcctggg
aagttgaggatgttggaggatgctgaggactggcagccccgcactggcacctcccagtcc
cgctccttccgcaaactggcccagctgacaggcacagatggcatggaggatggtgaggat
gaatttattaaaaagcccagggatgcccatgggtccaactggggcacagggcaacatcgg
cagccccctcaggctctggagccccccagtgacactgtgtgtgaccctgtgaagctgcgg
atgttagaggacattgtggactcaaagccccacacctggacctcccagtcccgttccttc
cgcaaactggcccggctggtgggagcaaacagcatggatgatggtgaggatgagcccgtt
aaaaagcccagacttgaggtgttttcagaactgcacaatgggcactgccagcattcagtc
actgctctgaccgtcacctcaggagggtcctgccccaagcacccacctggggattcccat
gggtccatctggggcatagtggagcagcgggagcctctggagccccccagcacccccggg
tgtgatcctgggaagctgcggctgatggaggacgcggagggctggcagccccgcaccggc
acctcccagtcccgctccttccgcaggctggcccagctgacgggcacagatgagatggag
gatggtgaggatcagattgttaaaaagcccagggatacccatgggtccagctggggcaca
gtggagcagcgacagcccccacagcctctggagccccccagcacccccgggtgcagccct
gggaagctgcggctgatggaggacgctgaggactggcagccccgcaccggcacctcgcag
tcccgcaccttccacaggctggcccagctgacgggcacagacagcagcatggaggatcat
gatgatgtgtttgttaggaagcccagccaggtctccgtgccggacccgtccccaggagca
gcgatgaaaactgagccaggactggcccccaggacccccagtgccacccccagccccacc
agccgcccaccctgggctgtggacccctcgtttgccgagcgctacgccccggacaagacg
agcacggtggtgagcaagcacagccagcctgccacgcccacccccatgcagaaccgcagc
tccatcgtgcaggcagcccagcaagcccccgaggggcccggccgcacccccctctgctac
aagtgcaacaaggtcatcaggggacggtacctcgtggcgctgggacattattaccacccc
gaggagttcatctgctgccagtgcaggaaggtgctggatgagggcggcttctttgaggag
aaaggctccatcttctgccccaagtgctacgacacgcgctacgcacccacctgcgccaag
tgcaagaagaagatcactggggaggtgatgcacgcactgaagatgacctggcacgtgcag
tgcttcacctgcaatgcctgcaaaactcccatccgcaaccgagccttctacatggaggag
ggacagccctactgtgagagagactatgagaagatgtttggcaccaagtgccgtggctgt
gacttcaagatcgatgctggggaccggttcctggaggcgctgggcttcagctggcacgac
acttgctttgtctgtgcgatctgccagaccaacctggaagggaagacgttctactccaag
aaggacaagcctctgtgcaagagccacgctttctcccatgtgtga
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