Agelaius tricolor (tricolored blackbird): 139597851
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Entry
139597851 CDS
T10815
Symbol
SH3TC2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atrc04131
]
139597851 (SH3TC2)
Membrane trafficking [BR:
atrc04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
139597851 (SH3TC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
SH3_2
SNAP
TPR_2
SH3_1
TPR_1
SH3_9
Motif
Other DBs
NCBI-GeneID:
139597851
NCBI-ProteinID:
XP_071299704
LinkDB
All DBs
Position
Unknown
AA seq
1362 aa
AA seq
DB search
MDGLCPAAGRGGTSSVPPATSCGTSQGHLWGWGNPVRDADTSAPPPGEECESCWPRPPEL
LPHGDRLHRRGQWDTAPGTQPQDMATGKAGLAERSSPAAEAGHGSPEPPLVLLPLRDTFP
PELSLSFSVESRSCGRRNAQLQEAARRRLWALESDDRSVCALFKELSARLVCTQAHEDRF
LLTFKTPEEVWKFSTYLTLGYVGTCLEQLLLAQEFWLDCALVEDTELRVTVDEEHLATIY
MDLLLQEGNFFCKAVPGVCKLEQEGEEGLQLCRNELVHVKSAGQDSRWEGISLKTGQRGV
VPVTALEPIAHPFYQWFLRNYAVSFGLSQEISGTNSRAIVRGRCIATKDHRGAAWDELSF
SKGDPIEIIGFFIPGLPWFVGKSLSTRSIGFVLTRHVNPEACEPLGKSFVFLSEEEKSPV
LHIPCNGDEEHFATLLGDLAHTDITSVYRLAGFEPTAAFPQVPPEAALHGSKEILQSWEE
INDWATSSTSELSSPGSETAPATLEDVLLEKLDDLDYPKFFIDLNASHMEDADVFDPILT
FLNQDSFVPSFQSFYDLSFSFLHSTFYGFSDEDELVLYLETSRNWAKRTRSLWAHVRLCF
LLGKLCIKKLKLSQARVYFEEAMSVLDRGFGDLPLLAALHGSLASIYLKQNMKHKFSSLL
GKTVTLLVCLPGRSFSSENELELLTYILRESIAVGNAPLEARICFLIVKLFLQLGRTEEV
LPFLEHLQCLSSTWLSPGSRAGPLDATATLGYLYDKKCLPNIALASVRSFAPSSAKGTPT
PIWRAGFILQNASKLLGRQQLDRSSIPAVACMYLRQALQFCCESRAVPMQRTLCAILSRT
YLQHGLLDGAIPYAARAAALARLLGEEEAFESSLCLAWLYVLQRRPGPAGQLLRRLRRCL
RGAACETPHGAVHNLLAMALTAQGRLQEAAENFLRALHKAKEAGSCRNQAVALANLGQLS
LSCGAAQLAELYLLWAVRLYSELQGHREMDTELAQVLLWLAQAMVDRQRLEDAKLCYELA
LGFALKWQNLRSQLHVTERLCHFYSRVCPELQACITYHEHRASLARQLQDRELEASARQA
LSQLYQALGTPEALRQSLDCTKQSLRIFIDLQEAVKAAEAWLQAGKLYYLLQEDELVEMY
FQAAIQTALKGDNFSLAMELYEKAGDTFFNGSRNRARAVEFYRGGAVPLARKLKATQTEL
RLFNKLAELQISLQGYEKALEFATLAARLSLRVGDQLQELVAFHRLATAYDLLHMHEMAE
DCYLKTLAMRPPVLQSSAEALYYCKVYWHLGNLALHKLKDEQDAASYFLLALAAAMELGD
EELQALLRAKLGAIPGAPGGPEGTPGCATDRPRWLSQGGHVV
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggacgggctctgtcctgctgctggcagaggtggcacgagcagtgtcccacctgccacc
tcctgtggcacatcccagggacacctctggggctgggggaatcctgtcagggatgcagac
acctctgccccccctccaggtgaagagtgtgagtcctgctggccccggcctcccgagctc
ctgccccacggggaccgcctgcaccgccggggacaatgggacacggcaccagggacacag
ccccaggacatggcaacaggtaaggctgggctggcagagaggagcagccccgctgccgag
gcaggacacggctccccagagcccccgctggtgctgctgcctctcagggacacctttccc
ccagagctctctctctccttctccgtggagagccgctcctgcgggcgccgcaatgcccag
ctccaggaggctgccaggaggaggctgtgggctctggagagtgatgacagaagtgtctgt
gccctgttcaaggagctctcagccaggctggtctgcacccaggcacacgaggatcgcttc
ctcctcaccttcaaaaccccagaggaagtctggaagttttccacctatctgactttaggg
tacgtggggacctgcctggagcagctgctccttgcccaggagttctggctggactgtgcc
ctggtggaggacacagagctcagggtcaccgtggatgaggagcacctggccaccatctac
atggacctgctcctccaggaagggaactttttctgcaaggcagtgcctggggtctgcaag
ctggagcaggagggagaggagggtctgcagctctgcaggaatgagctggtccatgtgaag
agtgctggacaggattccagatgggaaggaatatccctgaagacggggcagcgaggtgtg
gtgcctgtgactgctctggagccaatagctcaccccttttaccagtggttcctgaggaat
tatgctgtgagctttggcctctcccaggagatcagtgggacgaactctcgggccattgtc
agaggcaggtgcatcgccaccaaggaccacagaggagcagcgtgggatgagctgagcttc
tccaaaggagatcccatagaaatcattggattcttcatccctgggctgccctggtttgtg
ggcaaatccctcagcaccaggagcatcggctttgttctcacccgacacgtaaaccccgag
gcttgcgaacctctgggtaagagctttgtgtttctgagtgaagaggagaagtccccagtg
ctgcacatcccatgcaatggtgacgaggagcactttgccaccctcctgggggacctggca
cacactgacatcacctctgtgtacaggctggctgggtttgaacccacagctgcattccca
caagtgccaccagaggctgctctccatggcagtaaagaaatcctccagtcctgggaggag
atcaatgactgggctaccagcagcacctcagagctgtccagcccaggcagtgaaacagcc
cctgccacactggaagatgttctcctggagaagctggatgacttggattatcccaaattc
ttcattgacctcaacgccagccacatggaggatgctgatgtctttgaccccatattgacc
ttcctcaaccaagacagtttcgtgcccagttttcaaagcttttatgatctcagcttttcc
tttctccactccactttttatggtttctctgatgaggatgaactggtcctgtacctcgag
acttcccggaactgggccaagaggactcgttcactttgggctcacgtcaggctctgtttc
ctcttgggtaagctctgcatcaaaaagctcaagctctcccaggcccgggtgtactttgag
gaagccatgagtgtcctggacaggggctttggggacctgcccctgctggcagcgctgcac
gggagcctcgcctccatctacctgaagcagaacatgaagcacaagttttcctccctgctg
gggaagacggtgaccctgctcgtgtgcctgcctggccgctccttcagctcggagaacgag
ctggagctcctcacctacatcctgagggaatccatcgctgtgggcaacgccccgctggag
gctcggatctgcttcctcattgtcaagctcttcctgcagctgggcaggaccgaggaggtg
ctgccctttttggagcatctccagtgcctcagcagcacctggctcagcccaggcagccgt
gctgggcccctggatgccactgccaccctgggctacctctacgacaagaagtgcctgccg
aacatcgcgctggcctccgtcaggtccttcgctcccagcagcgccaagggcacgccgacc
cccatctggagagccggcttcatcctccaaaacgcttccaagctcctggggaggcagcag
ctggacaggagcagcatcccagcagtggcttgtatgtacctcaggcaggctctgcagttc
tgctgcgagagcagggccgtgcccatgcagaggacgctctgcgccatcctgtccaggacg
tacctccagcacggcctgctggatggagccattccttacgcagccagggctgcagctctg
gccagattgctgggggaggaggaggcctttgagtcctcgctgtgcctggcctggctgtac
gtgctgcagcggcggccgggcccggcggggcagctcctgcggcggctgcggcgctgcctg
cggggcgcggcctgcgagaccccgcacggcgccgtgcacaacctgctggccatggccctc
accgcccagggccgcctccaggaggctgcagagaacttcctgagggccctgcacaaggcc
aaggaggcgggcagctgcaggaaccaggccgtggccctggctaacctgggccagctgagc
ctgtcgtgtggggcggcccagctggccgagctgtacctgctgtgggcagtgcggctctac
agcgagctccagggccaccgagagatggacacggagctggcacaggtgctgctgtggctg
gcacaggccatggtggacaggcagaggctggaagatgccaaactgtgctatgagctggcg
ctggggtttgccctgaagtggcagaacctgaggagtcagctgcacgtcacggagcgtctg
tgccatttctacagcagagtgtgccccgagctgcaggcctgcatcacctaccacgagcac
cgggcatccctggcacggcagctgcaggacagggagctggaggccagtgccaggcaggcc
ctcagccagctctaccaggctctgggcacacctgaggctttgagacaatccctggactgc
accaagcaaagcctgaggatcttcatcgacctccaggaggctgtgaaggcagcagaggcc
tggctgcaggcaggaaaactctattatctcctgcaggaggatgagctggtggaaatgtac
ttccaggcagccatccagactgctctgaaaggggacaacttctccttggccatggagctt
tatgagaaagcaggtgacaccttcttcaatggcagccggaacagggcccgggctgtggag
ttttacaggggaggagctgtgcccttggccaggaaactcaaggccacccagacagagctg
aggctgttcaacaaactggcagagctgcagatcagcctgcagggctacgagaaggctctg
gagtttgccacgctggcagccaggctcagcctcagggttggggatcagctgcaggagctg
gttgccttccaccgcctggccacagcctatgacttgctgcacatgcacgagatggccgag
gattgctacctgaagaccctggccatgcgtccccccgtgctgcagagctcagcagaggcc
ctgtactactgcaaggtctactggcacctgggcaacctggccctgcacaagctgaaggat
gaacaggatgcagcctcctacttcctgctggccctggctgcagccatggagctgggagat
gaggagctgcaggccctgctccgtgccaagctgggtgccatccccggagccccaggggga
cctgagggcaccccaggctgtgccactgaccggccccggtggctgagccaaggtggccat
gtggtgtga
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