Agelaius tricolor (tricolored blackbird): 139597917
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Entry
139597917 CDS
T10815
Symbol
CDX1
Name
(RefSeq) homeobox protein CDX-1
KO
K09312
homeobox protein CDX1/4
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atrc03000
]
139597917 (CDX1)
Transcription factors [BR:
atrc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
139597917 (CDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
YdaS_toxin
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
139597917
NCBI-ProteinID:
XP_071299843
LinkDB
All DBs
Position
Unknown
AA seq
259 aa
AA seq
DB search
MYVGYLVDKDTNMYPSPVRHPSLNLNPQNYVPGPPQYSDFAGYHHVPGINSELHHGQPAA
AWASPYTPAKEDWHSYGTAATPATASPGQFGFSPPDFNPIQPPGSGLLPPAISSSVPQLS
PNGQRRTPYEWMRRSIPSTSNNGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAE
LAAALGLTERQVKIWFQNRRAKERKVNKKKLQQQSQPTSTTTPTPPAVSTLGPIGGLCSS
NAPSLVSSSPLTIKEEFMP
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgggatatcttgtggataaggacaccaacatgtatcccagccccgtccggcac
cccagcctcaacctcaacccccagaactacgtgccgggcccgccgcagtactcggacttc
gccggctaccaccatgtgccgggcattaacagcgagctgcaccacgggcagcccgcggcg
gcctgggcctcgccctacacccctgccaaggaggactggcattcctacggcaccgccgcg
acccctgccaccgccagccccggccagttcggattcagccccccagattttaatcccatt
cagcctccgggctctggacttctgcccccagccatcagcagctcggtgccccagctgtcc
cccaatggccagagacgcaccccgtacgagtggatgaggcgcagcattcccagcaccagc
aacaacggcaagaccaggacaaaagacaagtaccgggtggtgtacacggaccaccagcgc
ctggagctggagaaggagttccactacagccgctacatcaccatccgccgcaaggccgag
ctggccgcggccctggggctcaccgagcgccaggtgaaaatctggtttcagaatcggagg
gcgaaggagaggaaggtgaacaagaagaagctgcagcagcagagccagcccaccagcacc
accacgccgaccccaccagctgtcagcaccctgggacccattggaggcctctgcagcagc
aatgcccccagcctcgtctcctcatctccgctgacgatcaaggaagaattcatgccttaa
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