Agelaius tricolor (tricolored blackbird): 139598023
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Entry
139598023 CDS
T10815
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03015
mRNA surveillance pathway
atrc05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139598023 (CPSF4)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
139598023 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atrc03021
]
139598023 (CPSF4)
03019 Messenger RNA biogenesis [BR:
atrc03019
]
139598023 (CPSF4)
Transcription machinery [BR:
atrc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
139598023 (CPSF4)
Messenger RNA biogenesis [BR:
atrc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
139598023 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_3
Torus
zf-CCCH_2
zf-CCCH_4
zf-C3H1
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
139598023
NCBI-ProteinID:
XP_071299987
LinkDB
All DBs
Position
Unknown
AA seq
276 aa
AA seq
DB search
MQELIASVDHITFDLELAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPACKFMQGHPKSLESCNLKIT
TVGTEDPGRWSRSPATSVVKKVIMPTDAPKDTWPFSVDSEGAAGRCKGAVTTEERFLPST
MSGAINQVVFLMPLLKELVRGWLLLSNIFVIVPNFF
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagctcatcgccagcgtggatcacatcacgttcgacctggagctggccgtggag
cagcagctgggggcacagccgctccccttccctggcatggacaaatcgggcgcagctgtc
tgtgagttttttttaaaggcggcatgtggaaaaggaggcatgtgcccattcagacacatc
agtggggaaaagacagttgtttgtaaacactggctacgaggactgtgcaaaaagggagac
cagtgcgagttcctgcacgagtatgacatgaccaagatgcctgagtgttatttctactcc
aaatttggggaatgcagtaacaaggaatgtccattcttgcacattgacccggagtcaaag
atcaaagactgtccctggtatgacagaggcttctgcaaacacggtcccctgtgcagacat
cggcacactcggagagtcatttgtgtgaattacctggtaggattctgtccagagggccct
gcctgtaaattcatgcaaggacaccccaagtcattggagtcatgcaatctcaaaataaca
acagtgggaacagaggaccccggccgttggagcaggtcacctgctacaagtgtggtgaaa
aaggtcattatgccaacagatgcaccaaaggacacctggcctttctcagtggacagtgaa
ggagcagcaggaaggtgcaagggagctgttaccactgaggaaaggtttctgcctagcaca
atgtctggagctattaatcaggttgtttttttaatgccattactgaaagaactggtcaga
ggctggctgctgctaagcaacatttttgtaattgttcccaactttttttaa
DBGET
integrated database retrieval system
