Agelaius tricolor (tricolored blackbird): 139598100
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Entry
139598100 CDS
T10815
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atrc01002
]
139598100 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atrc04121
]
139598100 (USP42)
Enzymes [BR:
atrc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
139598100 (USP42)
Peptidases and inhibitors [BR:
atrc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
139598100 (USP42)
Ubiquitin system [BR:
atrc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
139598100 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
139598100
NCBI-ProteinID:
XP_071300151
LinkDB
All DBs
Position
Unknown
AA seq
1334 aa
AA seq
DB search
MTIVNKPKSSKSKKSSSRRSDKSMKPRTKKMTSRTASLGRVPPTEDPNKVSVDKGPGGHI
YCRSSQKSKPFAQRDLVVNDGIAPPQRILFPPEKICMDWQQTQSVGVGLQNLGNTCFLNS
TLQCLTYTPPLANYMLSLEHTKSCHVEGFCMMCTMESHINQVLCCSNNAIKPTSVINGLK
RIGKHFHFGSQEDAHEFLCFTVDALQKACLNGSTKLDRSSQATTLIYQIFGGYLRSRVKC
LNCKAVSDTYEPFLDVTLDIKAVTSVTRALEQFVKPEQLDGENSYKCSKCKKMVPASKRY
TIHRSSNVLTISLKRFANFTGGKINKDVKYPEYLDLRAYMSQSIGEPLIYALYAVLVHSG
FNCNAGHYLCFIKAGNGLWYRMNDASVELSDIKTVLNQQAYVLFYIRRYDLTLGERAFYL
PAPSYPRSFLGQRGASSKQPAFMGPRLPPHMIKSSSRLNGNGPLKEDPSTVGVAVKRPSS
APPTACVQNWAISRPSMADPSKAQKITISIHNKLPPRQAVPQAECPSSAVEEEDLKPLPS
ATITNSSAAEPTSNLSTVSVATNVSKQEAPDEIFVEPAVNGNPKLCSDNMVPYGAEPSGK
CEESKGLFKRHCNVISSNGILIGKVVRTLHNSHSSCQNAEERSQHELPKIDSLNGAISLD
NEYKENGLKLDDSTCQVQPVKPSEIFFSKANGVLEAMPKALSPDPQGILESLTYSQLNSL
SEEKSVSGPQKSSDKDGVTDTVVMEALFAYEESRKVPSNFSCEVEKLFTQSDSETIFTKE
EVAESIITKADNAHLNINGQHKVRKKSLDTEGEFLGQCESEDIRDKDKLRRSKEPELISK
ENPLYIKGSPESKEKLGQISSIKPDIECSSKKLASLDITDKCQDTKDISNNYVAVPPVND
SSITKLDKVLESQFSRADEGLSNKTCEDDDKHMKKNKKKIHDSKRTDKEHYRRKRESSDT
EEKERQTRNKPDDHSHRRRSSHSMETNRQSRHKQEYCSESKYRSSHNERNSPSNGRSSGK
YSRYRSRSRERTDPDRNRYYYSKGDRPWIRDRYYQDEPRRWDKCRYYSDYYSSHGTRDGR
ERRSSHCDKDYDKLSQAYSRSHKDYHCKGRWAHSTLSREEDVHHFSSHRANFHHCSVPQQ
HSEKYPRERHALPPGSAHSSFEDSSRENEKEKLRNGKRKYSHQEESGSDIEKKCRKTDDQ
RIKKYKKVKKKKKSKDKHREKDYKLYDLDCSVLHFDNDNRKHKKKKKKKKHDRKLKDLLE
YLDPRFQKKTWEKKEESRPPDDHLCEQYRNQGSKQPYKEEKPSGAGDSKKYSSMAATEYV
RDVELTDESLQYSD
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttaacaagccaaaatcttcaaagtctaaaaaatcttcctcaagacgctct
gacaaatctatgaaaccccgtactaaaaaaatgacgtctcgcactgcaagtttgggccgg
gtacctcctacagaagatccaaacaaagtctctgtggacaaaggtcctggggggcatatt
tattgtagatcatctcaaaaatcaaagccttttgcccaaagagatctagttgttaacgat
gggattgctccgccacaaagaattctttttccacctgagaaaatctgtatggattggcag
caaacacaaagtgttggagttggcctgcagaacctcggcaacacttgtttccttaattct
actctccagtgtttgacctacacgcctcctcttgccaattacatgctttcgcttgagcac
accaagtcatgtcatgtagaaggattctgtatgatgtgcacaatggaaagtcacatcaac
caggtcctgtgttgctctaataatgctatcaaacccacatctgttatcaatggccttaaa
agaataggaaaacatttccattttggcagtcaagaggatgcacatgaattcttatgcttc
actgttgatgctttacagaaagcttgcttgaatggaagcaccaaattagacagatcttct
caagccaccacacttatttatcagatatttggaggatatctaagatctcgagtgaagtgc
ttgaactgcaaagcagtgtcggacacgtatgagccatttctcgacgttactttggatata
aaggcagttacatctgtcaccagagctctagaacaatttgtgaaaccagaacagctggat
ggtgaaaacagctataagtgtagcaagtgtaaaaagatggttccagcatcaaagagatac
acgatacatcgctcttccaatgttctcacaatatcactgaaaagatttgcaaattttaca
ggtggaaagatcaacaaggatgtaaaataccctgaatatttggatcttcgagcatatatg
tcccaatctattggagaacccctcatctatgctttgtatgcagttcttgtacatagtggc
ttcaactgtaatgctggacactatctctgcttcataaaggctggtaatggactttggtac
cgaatgaatgatgcctcagtagagctttctgatatcaaaacagttctcaatcagcaagct
tacgtactcttctatatcaggcgctatgacctgacgctgggggagcgagcgttctacctg
cccgcgccctcctacccgcgctccttcctgggccagcgcggggccagcagcaagcagcct
gccttcatgggaccacggctgcctcctcacatgatcaagagttcaagtcgtttaaatgga
aatggacccttaaaagaggatcccagtactgttggtgttgctgtcaaaaggccgtcttca
gctccaccaacagcttgtgttcagaactgggccatttccaggccttcaatggcagaccct
tccaaagcccagaagatcaccatcagtattcacaacaagctgcccccccggcaggcggtg
ccgcaggccgagtgtcccagcagcgctgtggaggaggaggatctgaagccccttccttca
gccacaattacaaactcttcagcagcagagcctacctcaaacctctccacagtgtcagtt
gctactaatgtctccaagcaggaggctcctgatgaaatctttgttgagccagcagtgaat
ggaaaccctaagctgtgttctgataacatggtcccttacggtgcagagccttcaggaaaa
tgcgaggagtcaaagggcttgttcaaaaggcattgcaacgtcatctcttccaacgggatt
ctgattgggaaggtggtccgtacattgcataactcccattcatcctgtcagaatgctgaa
gaaagatcccagcatgagctgccaaaaattgattccctaaatggtgctattagtttagat
aatgaatataaagaaaatggactgaaacttgatgattccacttgccaagtccaacccgtt
aaaccttctgagatcttcttctctaaagcaaatggagtgcttgaagcgatgcctaaagct
ttgtcaccagatcctcaaggtatcttagaatctcttacgtacagccagttgaacagcttg
tcagaggaaaagagtgtctctggacctcagaagtcttctgacaaagatggagttacagat
actgtagtgatggaagcactgtttgcctatgaagaatccaggaaggttccttccaacttt
agctgtgaggttgagaaactttttactcaatcagattctgaaacgatttttaccaaagaa
gaagttgctgaaagtattataacaaaagctgataatgcacatctcaatatcaatggtcag
cacaaggttaggaaaaaatccttggatactgaaggtgaattccttgggcagtgtgagtct
gaagacatcagagataaagacaaactaagaagatcaaaagaacctgaactcatttcaaaa
gaaaatcctttgtacatcaaaggatctcctgagagcaaagagaaattagggcaaatttcc
tctataaagcctgacattgaatgtagttctaaaaaacttgcatctctagatattacagac
aaatgccaagatacaaaggacatttctaataactatgtagcggtaccacctgttaatgac
tcttctattacaaagctggataaagtattggaaagtcaattttctagagcagatgaagga
ctgagtaataaaacatgtgaagatgatgataaacatatgaaaaaaaataagaaaaaaatc
catgactctaaaagaactgacaaagagcactaccggaggaagagagaaagctcggacact
gaggagaaggagagacaaaccagaaacaaaccagatgatcattcccacaggaggaggagc
tctcacagcatggaaacaaacaggcaaagccgtcacaagcaggagtattgcagtgagagc
aagtacagatcctcccacaatgaaaggaacagtcccagtaatggcaggagctcaggaaaa
tattctcgctacagatcccgaagcagagaaaggacagatccagacaggaataggtattat
tattccaaaggagacagaccttggattagagacagatactatcaagatgaaccacggaga
tgggacaaatgcaggtactacagtgattattattcctcccatggaacaagggatggtagg
gagaggaggtcttctcattgtgataaagactatgacaaactgagccaagcttacagcagg
tcacacaaggattatcactgcaaaggcagatgggctcacagcacactctcccgagaggag
gacgtgcatcacttcagcagccacagagcaaacttccaccactgttcagtacctcagcag
cactcggaaaaatacccccgtgagaggcacgcgcttcctccaggctcagctcactccagt
tttgaggactcttcccgggaaaacgaaaaagaaaaactaagaaatggcaaaagaaaatac
tcccaccaagaggaaagtggaagtgacatagaaaagaaatgccgaaagacagacgaccaa
agaatcaaaaagtataagaaggtcaagaagaaaaagaagtccaaagataaacatcgagag
aaggattacaaactttatgatttggattgctctgtgctccactttgacaatgacaatcgc
aaacataagaaaaagaagaaaaagaagaagcacgacaggaaactgaaagacttattggaa
tatttagatcctcgtttccagaagaaaacatgggagaagaaggaagaatcccgtcctcca
gatgaccatttatgtgagcaatacagaaaccagggcagtaaacaaccctacaaggaagag
aagccttctggtgcaggtgacagcaagaaatacagctccatggcagccactgagtatgtc
agagatgtggagctgactgatgaaagccttcaatactcagactga
DBGET
integrated database retrieval system
