Agelaius tricolor (tricolored blackbird): 139598141
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Entry
139598141 CDS
T10815
Symbol
TMC5
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
atrc02000
]
139598141 (TMC5)
03037 Cilium and associated proteins [BR:
atrc03037
]
139598141 (TMC5)
Transporters [BR:
atrc02000
]
Other transporters
Pores ion channels [TC:
1
]
139598141 (TMC5)
Cilium and associated proteins [BR:
atrc03037
]
Other cilia and associated proteins
Stereociliary proteins
139598141 (TMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
139598141
NCBI-ProteinID:
XP_071300227
LinkDB
All DBs
Position
Unknown
AA seq
859 aa
AA seq
DB search
MSYHYDEAFENPDYHFSETLEIDRRGSSQRNPFSHPTPYDSSQSDYYGEHRGREQNYPVA
IPMVSLGPGSDYSQDLPSPSPYGNFSDNLTFEPEPELTYTPYSTSHMLDYPYTHGISSGS
EDSFIRRRNRRPPDEIFMTSSSMFETDPVCREEEDLVGSLASMSSNERVKAIQKMPKTMR
QKREIRNKVLKEITKKSRHRGAQCTQGVAVPFQRFGNTLSECFQQLQPWHKTLKIIGAEF
GTSVLSYFVFLKWLLNLNIFSFLINFGFITIPQFLAAEPNNLSFMGLELLTGAGYFQQTV
LYYGFYTNATISKVENGPSYNMQLAYIFTVGIYFVISFLILLFSMARFFSRNFVKLTKAF
SVNASKLLCTWDFNITNEKAVKLQQKNLLTQIKEDLTEVNKEVLNFSVKERVGRIATHLL
AWVVFLATAVAASTGVYFLSINNLELFMKGYSNDLQRQAAMLVLPVIVSLLNTLIPFFFS
WLGHLEKFQTPGQHIYVTIIRNTILKMSIVGILCYYWLNIVAASESQCWETLVGQDIYRL
VLVDFIFCLLGSFFGEFLRRIIGTTVCVSLGLPEFDIGRNVLDLIYAQTLTWIGILFSPL
LPGIQMIAFLIVFFVKKVSLMRNCQPPRKVWRTAQMTTSFIFLLFCPSFLGVLSVIGVTV
WRLKPSEECGPFRGLPSMYASVDEWIQILESYTVSKWVVWIYHNLISSELFFFIISTVVL
IVIYLYWQIIQARKTMTKLLRNQILNAGKDKMFLLKKLRREQRAKRSSSARGGRGQQRSF
SSYHPSMQPAQEMPGYAERAFDRSQNTSYNEHPFSVEISSSSDFPPGGEPSPSRAVALAL
RARAAALGEDSDGSEGFQP
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcattatgatgaagcctttgaaaatccagactaccacttctcagagacattg
gaaattgatagaagggggagctctcaaaggaatccattctctcacccaactccttatgat
tcatctcagtctgattactatggagagcacagagggagggagcagaactaccctgtggcc
atcccaatggtttccctgggacctggctctgactacagccaggatttacccagcccaagt
ccatatggaaatttctcagacaatcttacctttgagcctgagccagaactgacttacacc
ccatattctacctcccatatgctggattatccctacactcatggaatttccagtggatca
gaggacagcttcattcggagacgcaaccgaagaccacccgatgagatcttcatgacttct
tccagcatgtttgaaacagacccagtgtgcagggaagaggaagatttagttggaagtctt
gcaagtatgtccagcaatgaaagggttaaagccatccagaagatgccaaagaccatgaga
caaaagagagagatcagaaacaaggttctgaaagaaataaccaaaaaatcaaggcatcgt
ggtgctcagtgtacacagggagtagcagtgccgtttcagagatttggaaataccctttca
gaatgttttcaacaactgcagccatggcacaagactctgaagatcattggtgctgagttt
ggaacaagtgttctttcttattttgttttcttgaagtggctgctaaatttgaacatcttc
tcattcctcataaactttggtttcatcacaattcctcagtttcttgcagcagaaccaaat
aacctttcattcatgggcctggagctgctcactggagctggttattttcaacaaacagtg
ctctactatggcttttacaccaatgctacaatcagtaaagtggagaatggtccatcttac
aacatgcagctggcctatattttcactgttggaatatattttgtcatcagttttcttatc
ttgttgttcagcatggcaagattcttctccaggaactttgttaagttaacaaaggcattc
tctgtgaatgccagcaagctgctctgtacttgggacttcaatataaccaatgaaaaagct
gtgaagctgcaacaaaagaatctcctcacacaaataaaggaagatctcactgaagtaaac
aaagaagttctaaatttttctgtgaaggagagagttggtcgtattgctactcatctcctt
gcttgggttgttttcctggcaacagcagtagctgcttctactggtgtttacttcctctcc
attaataacctcgagctgtttatgaaagggtatagcaatgatctacagagacaagctgcc
atgttggtgctacctgtgattgtatctctcctcaacacattgatcccattcttcttctcc
tggctcgggcacctggagaagtttcagactcctggacagcacatatatgtcactattatc
agaaataccatcctgaaaatgtcaattgttggaatactgtgctactactggctgaacatt
gtggctgcctcagagtcacagtgctgggaaactttggttggccaagatatctatcgtctt
gttctagttgacttcatattttgtttgcttggctctttctttggagagtttttacgaaga
attattggaactacagtctgtgtgagcctggggctgccagaatttgatattggacgaaat
gttttagatttgatctatgcacagactttgacctggattggtatcctgttctcacctctg
ttgcctggtatccagatgatagcatttcttatagtattttttgtgaaaaaggtcagtctg
atgaggaattgccagccccctcgcaaagtctggagaactgctcaaatgaccacatccttc
attttcctgctcttttgtccttccttccttggagtcctgtctgtcattggagtcactgtc
tggaggttaaaaccttcagaagaatgtggtcctttcagaggtttgccttccatgtatgct
tcagttgatgagtggatacagatactggaaagctacactgtctcaaaatgggtagtgtgg
atctaccacaatttaatttcaagtgaacttttcttcttcatcatctctactgttgtacta
attgttatttatctttactggcaaataatacaagcaagaaagaccatgaccaaactctta
cgtaaccaaattttaaatgcaggaaaagataagatgtttctactcaaaaagctacgaaga
gagcaaagggcaaagagaagctcgtctgcccggggaggaagaggccagcagagaagcttc
tcttcataccacccatccatgcaacctgcccaggagatgccaggctacgcagaaagggca
tttgacagaagccaaaacacatcctacaatgagcatcccttttctgttgagatctcaagc
agcagtgactttccaccaggcggcgagcccagcccgtcccgcgccgtggcgctcgccctg
cgcgcccgggcagcggcgctgggcgaggacagcgatggcagcgagggattccagccctaa
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