Agelaius tricolor (tricolored blackbird): 139598412
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Entry
139598412 CDS
T10815
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
Enzymes [BR:
atrc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139598412 (RBBP6)
Ubiquitin system [BR:
atrc04121
]
Ubiquitin ligases (E3)
U-box type E3
139598412 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139598412
NCBI-ProteinID:
XP_071300875
LinkDB
All DBs
Position
Unknown
AA seq
1788 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLSDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
SALIPKNSSVIVRRIPIGGVKATSKTYVMTPKSHKILETTFRSRSEPVSGTSKAIDDSSA
SISLAQLTKTANLAEANASEEDKIKAMMTQSGHEYDPVNYMKKPVGPPPPSYTCFRCGKP
GHYIKNCPTNGDKNFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEA
YAIGKKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTA
LLESEEHTCPTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKIQQQQQQQQQLPP
PPPPPPPPLMRQTITRTLQPLMRPAMARQQDPLMIPLASLASRSALSSLGPGPSMAAGLP
VNPSSVVVSDLPPAVSLSLRGEKPDGPFRDADAVLPPALMTAAELSKSSPLSISSLLEEK
GYQVPVLRQPAIPSLLGPQGQSIPTTGHPMRAGALRRPGWELSNRGRPHSDRAQRTQAPS
LPASAPVFVPVPPPPLYPPPPHALPLPPGVPPPQFPPQFPPGQPPSAGYTVPPPGYPPAP
ANMSSAWVPTAVPAAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKE
LMEYKKIQKERRRSFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSRSYS
RSPPYQRRGKGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPVFRGQSPTKRTVPQG
EAEREYFNRYREVPPYDMKAYYGRSVDFRDPFEKERYREWERNYREWYEKFYKGYAVGAQ
PRPPVSRENFSPERFGPPGTRRENSPYARGRREEYPAGQSHRNRNVAGNYPEKPGRESHG
IKDPTKSKEKEVENPLGDGKGNKHKKHRKRRKGDESEGFPNVELLEGARKPREPVPTEDA
KTDSLFMLPSRDDATPVRDEPMEADSIAFKPVSEKEKKEKDKPKAKVEKTKRKVEVAAAP
KKDSVTKPAKASQEKVDPDREKSPRTEPPVKKVKEELPKTDSVKTSSSQKDEKALGTPRK
AHPKVTKDHPETRPAKEDKAKKEHPKEAKAEKPSSKEEKSKKPAEKSKLSDAKLEKRKRK
AEEKADKEHEATSAKAYKPENAELKTSPKGKAEPEGEKGERTPEKDKAAFLNNPSKKIKL
NRETGKKIVSGENVPPGKEAVEKPEPSSSKVKAEKTKGKARRKVTAADGASSTLVDYTST
SSTGGSPVRKPEEKPDTKRTVIKTLEEYNNDITAPAEDVIIMIQVPQSKWDKDDFESEEE
DIKSTTQVPPAVGKPTSVIKPVSAKAPNPLKHTEKETEPLEKIQKAAKETSYESTQHDAK
SSKSSVSSEKGKTKDRDHSLSDKDSSEKRKSSVQPEKEHSERTAEQGNGKTVSQSSKDGR
SSEKHDSGRGSAAKDFTPNRDKKSDHDGSREHSSSKRRDEKSESARRKDSPSRIRDSTAV
QKSKPREERAEPAKKGPAEAKRSSYSPQRERKPAEHKAVHEPKRPAEEHKAPDKNPGKEK
EKEKEKEKHVPEVKSNKEKEPGGNKPPVKQDSPEVKVEKENVAAQSDKGAAKPKPPVSSA
ARLSSDLTRETDEAAFVPDYNESDSESNVSAKDEEAAGKTPKEAKEKAVDKAKEEAAAPV
PAEQPEVGRSQSQSSPSVSRSRSHSPSESQTRSHSSSASSGESQDSKKKKKKKEKKKHKK
HKKHKKHKKHMGNETELEKSQKHKHKKKKSKKSKDKEKDDQKVKSVTT
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcgtgcactacaagttctcctccaagctcaactatgacacggtcaccttcgac
gggctgcacatctccctgagcgacctcaagcgccagatcatgggccgggagaagctgaag
gcggccgactgcgacctgcagatcaccaacgcgcagaccaaagaagagtacaccgatgat
agtgctctgattcccaagaactcatcagtgattgtgaggagaatccccattggaggagtt
aaagctaccagcaaaacatacgttatgactcctaaatcgcacaaaatcctagaaactact
ttcagaagtcgaagtgagccagtgagtggaacatcaaaagcaattgatgactcttctgca
tctatttctctggcccagcttactaagactgccaatctggctgaagccaatgcttccgag
gaggataaaataaaagctatgatgacacagtctggccatgaatatgatccagtcaattac
atgaagaaacctgtggggccacctccaccctcctacacctgttttcgctgtggcaaacct
gggcactacataaagaactgtccaacaaatggggacaaaaatttcgagtctgttcccaga
attaaaaaaagcacaggaattccaagaagttttatgatggaggtgaaggaccccaacaca
aagggtgccatgctgaccaacactgggaaatacgcaattccaaccatagatgcggaagct
tatgctataggaaagaaggagaagcctcccttcctacctgaggagccatcctcctcctca
gaagaagatgatcctattccagatgagctgttgtgtctcatttgtaaggatataatgacg
gatgcggttgttattccctgctgtggaaacagttactgtgatgaatgtattagaacagca
ctgctggagtctgaggaacacacatgccctacctgccatcagacagatgtttctcctgat
gctttaatcgccaacaagtttctgcgccaggctgtcaacaacttcaagaatgaaaccggt
tacacaaaaaggctccgtaagattcagcagcagcagcagcagcagcagcagctgccgccg
ccaccgccgccgccgccgccgcccctgatgcggcagacgatcacgcgcaccctgcagccg
ctgatgcggccggccatggcccggcagcaggacccgctgatgatcccgctggcctcgctg
gcctcccgctccgccctctcctccctgggccccgggccgtccatggcagctgggctgcca
gtcaatccgtcttcggtggttgtctccgatctgcctccggcagtgtccctctccctccgt
ggggaaaagccagatggaccttttcgtgatgccgatgctgttttgcctcctgctctgatg
actgctgctgagctttccaaatcttcccctttgtcaatcagcagtttgttggaagagaag
ggctatcaggttcctgtactgagacagccagcgataccaagtctactgggccctcaagga
caatcaatacctacaactggtcatccaatgagagctggtgcgcttcgcaggccaggctgg
gagctttcaaatcgaggacgcccgcacagtgaccgtgcccaaaggactcaggccccatca
ctgccagcatcagcaccagtctttgtgcctgtgcctccacctcccttgtatcctccacca
ccccatgctcttcctcttcctccgggggtaccaccaccacagtttcctcctcagtttcca
cctgggcagcctccatccgctgggtacactgtcccccctcccggatatcccccagctcct
gcaaacatgtcatcagcttgggtcccaacagcagtgccagcggctcattcaaacaccatc
ccaacgacacaagcacctcctctctctagggaggagttttacagagagcaacggaggctt
aaagaggaggaaaagaaaaagtccaaacttgatgagtttacaaatgattttgctaaggaa
ttgatggaatataaaaagattcaaaaggagcgtaggcgttcgttttccaggtccaagtct
ccctatagcgcttcgtcttactctagaagctcgtacacctactccaagtcacgctcaggt
tcatcgcgctcccgctcctactcgcgctccttcagccgctcccattcccgctcctactcg
cggtcgccgccctatcagagacgaggcaaagggaagagtcggaactaccgctcccgctcg
cgctcgcacggctaccaccgctcccgctcccgctcgcccccgtacaggcgctaccactcc
cgctccaggtctccggtgttccggggccagtcccccaccaaacggacggtcccgcagggc
gaggccgagcgcgagtacttcaaccgctaccgagaggtgcccccgtacgacatgaaggcc
tactacggccgctcggtggacttcagagacccctttgagaaggagaggtacagagaatgg
gagaggaactacagagagtggtacgagaagttttacaagggctatgccgtgggtgctcag
ccacggcctccggtgagcagagagaacttctctccagaacggtttggcccacctgggacc
agacgagagaattcaccatatgctcggggacggagggaggagtatcctgctgggcagagc
cacaggaatcgtaatgtagctggaaactaccctgaaaagcctgggagagagagccatggc
atcaaagatcctacaaaatcaaaagagaaggaggtggaaaatccactgggagatggcaag
ggcaataaacataaaaaacaccggaagagaagaaaaggggatgagagtgaaggatttccc
aacgttgagctgttagaaggggcaagaaaaccaagagagccagttccaacagaagatgct
aaaacagactctctattcatgctgccaagcagggatgatgccacccctgtaagggatgag
cccatggaagcagattccattgctttcaaaccagtgtctgaaaaggagaaaaaagagaag
gataagccaaaagcaaaggttgagaaaacaaagcggaaagtagaagtggcagctgctcca
aagaaagacagcgtaacaaagccagctaaagcttcccaggaaaaggtggaccccgatcgc
gaaaaatctcctcgaacggagcctcctgtgaaaaaagtcaaggaagagctgccaaagaca
gacagtgttaaaacttcttcctctcagaaggatgagaaggctcttggtacaccacggaag
gctcatcccaaagtgacaaaggaccacccagaaaccagaccagccaaggaggacaaggca
aagaaagaacatcctaaagaagccaaggcagagaagccctccagcaaggaggagaagtca
aagaaacctgctgagaaaagcaaactttctgatgccaaacttgagaaaaggaaaagaaaa
gcagaggaaaaggctgataaagaacatgaggccacttctgcaaaggcctataaacctgaa
aatgcagaattgaaaacatcacccaaggggaaggctgagcctgagggggagaaaggagag
cggaccccggaaaaggataaagctgcttttcttaacaacccatccaaaaagattaaactt
aaccgagaaactggaaaaaagattgtgagtggagagaacgtgccacctggaaaagaagct
gtggagaaacctgagcccagcagcagcaaagttaaagcggaaaagacaaagggaaaagca
aggaggaaagtgacggcagctgatggcgcgagctcgactcttgtggattacaccagcacg
agttctactgggggaagccctgtcaggaagcctgaggagaagccagacaccaaacgaact
gtcattaagaccctggaggagtataacaacgacataacagcccctgctgaggatgtcatt
atcatgatccaggtccctcagtccaagtgggataaagatgactttgagtctgaagaggag
gacatcaaatccaccacccaggtgcccccagctgtaggaaaacccaccagtgttatcaaa
cctgtgagtgcaaaggcaccaaaccccctcaaacacactgaaaaggagacagagcctctg
gagaaaatacagaaggctgcaaaagagacaagttatgaaagcacccaacatgatgccaag
agttcaaaaagttccgtgtcaagtgaaaaaggtaaaaccaaagaccgggatcattctttg
tcagacaaggacagttctgagaagaggaagagcagtgttcagccagaaaaagagcactca
gaacgcacagctgagcaaggaaatggaaaaactgtatctcagtcttcgaaagatggcaga
tcttcagagaagcatgacagtggccgtggctctgccgcgaaggacttcactcccaaccga
gacaagaagtctgaccacgatggcagcagggagcattcgagttccaagcgcagagatgag
aagagtgaatcagcgcggaggaaagactccccatcccggatcagagactccacagcagtg
cagaagagcaaaccaagagaggagcgtgcggagccagccaagaagggccctgcggaggcc
aagcggagcagctacagcccccagcgggagcgcaagcccgccgagcacaaagctgtgcac
gagcccaagcgccccgctgaggagcacaaagccccggataaaaacccgggcaaggagaag
gagaaagagaaggagaaggagaagcatgtcccagaagtcaagagcaataaggagaaagag
ccaggtgggaataagccaccggtgaaacaggactcgccagaagttaaagtggagaaggag
aacgtggcggctcagagcgataaaggcgcggcgaagcccaagccgccggtgagcagcgcc
gcgcgcctctcgtccgacctcacccgcgagaccgacgaggccgccttcgtgccagactac
aacgagagtgacagcgagagcaacgtgtctgcaaaggacgaggaggctgcagggaaaacg
cccaaagaggcgaaggaaaaggcggtggataaggcgaaagaggaggcggccgccccggtt
cccgccgagcagccagaggtgggcaggagccagagccagagcagccccagcgtcagccgc
agccgcagccacagcccctccgagagccagacacggagccacagcagcagtgccagctca
ggggagagtcaggacagcaagaaaaagaaaaagaagaaagagaagaagaagcacaagaag
cacaagaaacataagaagcataagaaacacatgggaaatgaaacagaattggaaaagagc
caaaaacacaaacacaagaagaaaaaatcgaagaagagcaaagataaagagaaagacgac
caaaaagtgaaatctgtcacgacataa
DBGET
integrated database retrieval system
