Agelaius tricolor (tricolored blackbird): 139598413
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Entry
139598413 CDS
T10815
Symbol
RIMS1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atrc04131
]
139598413 (RIMS1)
Membrane trafficking [BR:
atrc04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
139598413 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
139598413 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
FYVE_2
PDZ
PDZ_6
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
139598413
NCBI-ProteinID:
XP_071300885
LinkDB
All DBs
Position
Unknown
AA seq
1544 aa
AA seq
DB search
MSSSVGPRGPRPPTVPPPMQELPDLSHLTEEERNIIMAVMDRQKEEEEKEEAMLKRLHQQ
FESYKEQVRKIGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRV
SLRSNNEDKVVMWVCNLCRKQQEILTKSGAWFFGSGPQPSPSQDGTLSDTATGASSDAPR
EKKARLQERSRSQTPLSTAAASSQEISSSSVQPDRRKGAEVSQPAMGPDQKQASRSRSEP
PKERKKAVLVSDQNGKGVKSERKRVPKSSLQKEGPADDRERKERHEGRRLEKGKSQDYPD
LPEKLEEGKVPDDEKQRKEDEYHTRYKSDPNLARYPVKPHPEEQQMRMHAKVSKARHERR
HSDVALPHTEMEEAEVPENKLGKRSQLQGTQDRKSLVETQRSYSIDRTGDVRISVSKQLT
NHSPPTPRHSPVPIEHVEYKNHDSFIKQSRLDPSSAILMRKAKREKMETMLRNDSLSSDQ
SESVRPSPPKPHRAKRGGKKRQMSVSSSEEEGASTPEYTSCEDVEIESESVSEKGDLDYY
WLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRVILNKRTTMPKESGALLGLKVVGGKM
TELGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQV
EIIVSRPIGDIPRIPETSHPPLESSSSSFESQKMERPSISVISPTSPGALRDAPQVLPGQ
LSVKLWYDKVGHQLIVNVLQATDLPTRVDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKSL
EPKWNQTFLYSHVHRRDFRERMLEITVWDQPRVQEEESEFLGEILIELETALLDDEPHWY
KLQTHDESSLPLPQPSPFMPRRHVHGGESTSKKLQRSRPISDSDISDFDVDDGIGVVPPV
GYRSSTRESKSTTLTVPEQQRTTTHHRSRSVSPHRGDDQGRPRSRLPNVPLQRSLDEIHQ
MRRSRSPTRHHDASRTPVDYRSREMDSQYLSDQESELLMLPRAKRGRSAECLHTISELQP
SLDRARSASTNCLRPDTSLHSPERERGRWSPSLERRRPTSPRIHIQHASPEDDRQSRKVE
RYSSQKQARKGPAAETERAHQQGSPTQSPPADTSFSSRRGRQLPQVPVRSGSIEQASLVV
EERTRQMKMKVHRYNQTSGSGSSQEHEREQYTKYNIQTDQYRSCDNVSAKSSDSDVSDVS
AISRTSSASRLSSTSFMSEQSERPRGRISTFTPKMQGRRMGTSGRITKSTSVSGEMYKLE
HIDGSQSDTAVGMVGTGGKKRRSSFSAKVVAIVSRRSRSTSQLSQTEAGSKKLKSTIQRS
TETGMAAEMRSRMVRQPSRESTDGSINSYSSEGNLIFPGVRLGADSQFSDFLDGLGPAQL
VGRQTLATPAMGDIQIGMVDKKGQLEVEVIRARGLIQKPGSKSTPAPYVKVYLLENGACI
AKKKTRIARKTLDPLYQQTLVFEESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDL
SSVVIGWYKLFPPSSLVDPTLTPLTRRASQSSLESSTGPPCIRS
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcggtggggccccgcggccctcgcccgcccacggtgccccccccgatgcag
gagctgcccgacctgagccacctgacagaggaggagaggaacatcatcatggcagtgatg
gaccggcagaaagaggaggaagaaaaagaagaggccatgctcaagaggttgcatcaacaa
tttgaaagctataaagagcaagtaagaaagataggggaagaagcccgccgttaccaggga
gagcacaaggatgatgctccaacatgtggaatctgtcataaaacaaagtttgcagatggt
tgtggccatttgtgctcttattgccggaccaagttctgtgctcgatgtggaggtcgtgtc
tctctgcgatcaaacaatgaggacaaagtggttatgtgggtatgcaatttatgtcgaaag
caacaagaaatcctaacgaagtccggagcgtggttttttggaagcgggccgcagccgtcg
cccagccaggacggaacgctgagtgacacggccacgggcgcaagctcggacgcaccgaga
gaaaagaaagcgaggcttcaggagcgatcgaggtcacagactcccctgagcacagcagct
gcctcatcacaggaaatctcctcttccagtgtgcagcctgaccgtaggaaaggagcagaa
gtgtcgcagccggctatgggcccggaccaaaagcaagcttcaaggtctaggagtgaacct
ccaaaagagaggaagaaggcagtattggtttctgaccagaatggcaaaggtgtaaagagt
gagcgtaagcgtgtgccaaaatcctcacttcaaaaagaaggaccagcagatgacagggag
cgtaaagagcggcatgaaggtagaaggctggagaaaggcaagtcacaggattacccagac
ttgccagagaaacttgaggaaggcaaagtgcctgacgatgaaaaacaaaggaaggaagat
gaatatcatacccgttacaagagtgaccccaatctggcgagataccctgtaaaaccacac
cccgaggagcagcagatgcgcatgcacgccaaagtttctaaagcacgacacgagagaaga
cacagtgatgtagctttgccacacacagaaatggaggaagcggaggtacctgagaataaa
ttaggaaaacgctcacaattacagggaactcaggacagaaaatctcttgtggaaactcag
aggtcgtactctatagacagaacaggtgatgtaagaatttctgtttctaaacaattaact
aatcatagcccaccaactcccaggcatagtccagttcctatagagcacgtagaatacaag
aaccacgattcctttataaaacagagccgccttgatcctagctctgctattctcatgcga
aaagcaaagcgggagaaaatggagaccatgctaaggaatgattcccttagctctgaccag
tcggaatcagtgcggccatcccctccaaagcctcatagagcaaaaagaggcggaaagaaa
aggcagatgtcagttagtagctcagaggaagaaggggcatcaacaccagaatatactagc
tgtgaagatgtggagatagaaagtgaaagtgtcagtgaaaaaggtgacttggattactac
tggctggatcctgccacgtggcacagcagggagacgtcccctattagttcgcatcccgta
acgtggcagccttccaaagagggagatcgcttaattgggcgtgttattcttaacaagaga
acaaccatgcctaaagaatcaggtgcattactggggctaaaagttgttggaggaaaaatg
acagaattaggacgactcggtgccttcattaccaaagtgaagaaaggtagcttggctgat
gtggtggggcatctcagagcaggggatgaagttctagaatggaatggtaaacccttgcct
ggagctacaaatgaagaagtttacaacattattttagaatcaaaatcagaacctcaagtt
gaaatcattgtttccaggcctattggtgatattccacggattcccgagacttcccacccc
ccattagagtctagttcaagttcttttgaatctcagaagatggaaaggccttctatttct
gttatatctccgactagccctggagccctacgggatgcacctcaggtcctaccagggcag
ctttctgttaaactctggtatgacaaagtgggacatcagttaatagtaaacgttctacag
gcaacagatttgccaacaagagtagatgggcgccccagaaatccctatgtaaaaatgtat
tttcttccagacagaagtgataaaagtaaaagaaggaccaaaacagtaaagaaaagtcta
gagccaaaatggaatcaaacttttctctactcacatgtacatcgtagagattttagagaa
cgaatgcttgaaatcacagtatgggatcagccaagagtacaagaagaagagagtgaattt
cttggagagattcttatagagctggagacagcacttttagatgatgaaccacattggtat
aagctacagacacatgatgaatcttcactacctctgcctcagccatcaccattcatgcca
agaagacatgttcatggtggagagagcactagcaaaaaattacaaagatctcggccaatc
agtgatagtgacatctcagattttgatgttgatgatggtattggagttgttcctccagta
ggttataggtctagtactagagaaagcaaatccacaacgctaactgtgccagagcagcag
agaacaacaacgcatcatcgttcacgttccgtgtctcctcaccgtggtgacgatcagggc
aggccccgttcacgtttaccaaatgtgccattacagaggagtttagatgaaattcatcag
atgagaagatcacgttctccaactagacaccatgatgcctccagaactccagttgattac
agatccagagagatggatagtcagtatttgtctgatcaagaaagtgagcttcttatgctg
cccagagcaaagcgaggaagaagtgcagagtgcctacacaccatcagtgaactgcagccc
tcccttgacagggctaggagtgctagtaccaactgcttgagaccagatactagtttgcat
tcaccagaacgagaaaggggtagatggtccccctccctagagaggagacgacctactagt
cccaggattcatatccagcatgcatctccggaggatgacaggcagtccagaaaagtggaa
agatatagcagccaaaaacaagctaggaaaggccctgcagctgaaacagaaagagcacat
caacaaggaagtcccacgcagtctcctcctgcagacacctccttcagcagtcgtagggga
agacagctaccacaagttccagtaagaagtggcagtatagagcaagcaagcttagtagtg
gaggagcgaacgagacagatgaaaatgaaagtgcaccgttataatcagacatcagggtct
ggttctagccaagaacatgagcgtgagcaatataccaagtataacatacaaacagatcag
tacagaagttgtgataacgtctctgccaaatcatcagatagtgatgtcagtgatgtgtca
gccatttcccgaaccagcagtgcctctcgcctcagcagcacaagttttatgtcagagcaa
tctgagcgccctcggggcaggatcagtacatttactcctaaaatgcaaggcagacggatg
gggacttcagggagaatcacaaagagcacaagtgtgagtggagagatgtacaagctggag
cacattgacggcagccagtcggacacggccgtcggcatggtcggaacaggtgggaagaaa
aggcgctccagctttagtgccaaagtggttgccatagtgtctcgaaggagcagaagcaca
tctcaacttagtcaaacagaggctggaagcaagaagctaaagagcacgatacagagaagc
acagaaacaggaatggcagcagagatgagaagtcgtatggttcgacagccaagtcgagaa
tccactgatggcagcataaatagttatagctccgagggcaacttaatatttcctggagta
cggctgggcgctgacagtcagttcagtgatttcctcgacggactgggacctgcacagtta
gtaggccgacaaacactagcaacccctgccatgggtgacatccagattggaatggtggat
aaaaaaggccagttagaagtagaagtcattagagcccgtggcctcatccaaaaacctggc
tccaaatctaccccagctccgtatgttaaagtgtatttactggaaaatggagcatgtata
gctaagaagaagacaagaattgcaaggaagacacttgatcctctgtaccaacagacactg
gtttttgaggaaagtccacagggtaaagtccttcaggtaatagtctggggagactatggc
cgaatggaccacaaatgcttcatgggagttgcccagatccttctggaggaactggatctg
tccagcgtggtaataggctggtataaattatttccaccttcatcactagtggatccaaca
ttgactcccctgacacgtagggcttcccagtcatctctggaaagttcaactgggcctccc
tgcattagatcatag
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integrated database retrieval system
