Agelaius tricolor (tricolored blackbird): 139598421
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Entry
139598421 CDS
T10815
Symbol
TRAF7
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7 isoform X1
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atrc04121
]
139598421 (TRAF7)
Enzymes [BR:
atrc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139598421 (TRAF7)
Ubiquitin system [BR:
atrc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
139598421 (TRAF7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_2nd
DSE1_N
EIF3I
WDR55
Beta-prop_EML
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
NBCH_WD40
Beta-prop_Aladin
Beta-prop_IP5PC_F
Beta-prop_WDR41
zf-RING_UBOX
Beta-prop_SPT8
Beta-prop_DCAF4
ASA1
zf-C3HC4
WD40_like
zf-TRAF
PAC11
zf-C3HC4_2
Beta-prop_EIPR1
zf-C3HC4_4
Sina_ZnF
Beta-prop_IFT140_2nd
TRM82_WD
Beta-prop_Nup120_160
zf-C3HC4_3
WD40_MABP1-WDR62_1st
CEP135_TSGA10_CC
zf-RING_5
PII1_coiled_coil
CRWN_N
PKcGMP_CC
CCDC39
DUF641
MIOS_WD40
CCDC18_2nd
Rod_CreS
At4g38062_N
Ccdc27
Filament
DUF16
KxDL
DUF4164
Motif
Other DBs
NCBI-GeneID:
139598421
NCBI-ProteinID:
XP_071300920
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MSSNKSARYNRFSSGTTSITTAESTNGTRMETTFGPAFSAVTTITKADGTNTFKQHRRTP
SSSSTLTYSPRDEDDGMPPISTPRRSDSAISVRSLHSESNMSLRSTFSLHEEEEEPEPLV
FAEQPSVKLCCQLCCSVFKDPVITTCGHTFCRRCALTSEKCPVDNAKLTVVVNNIAVAEQ
IGELFIHCKYGCRPAASSKNPAFEVDPRGCPFTIKLSARKDHESSCDYRPVRCPNNPSCP
PLLKMNLEAHLKECEHIKCPHSKYGCAFIGNQDTYETHLETCKFEGLKEFLQQTDDRFHE
MQVAMAQKDQEIAFLRSMLGKLSEKIDQLEKNLELKFDVLDENQSKLSEDLMEFRRDASM
LNDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSIGDLLFSGSSDKTI
KVWDTCTTYKCQKTLEGHDGIVLALCIQGNKLYSGSADCTIIVWDIQNLQKVNTIRAHDN
PVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVASQNYLYSGSYQT
IKIWDIRNLECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIETKEQVRTLTGHVG
TVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGA
VDSTVKVWTC
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaaacaagagcgctcgctacaatcgtttctccagtggcaccacaagcatcact
actgctgagagcactaacgggacaagaatggaaacaacttttggaccagccttctctgct
gtgaccaccatcacaaaggctgacgggaccaacactttcaagcagcaccgtcggaccccg
tcctcctccagcaccctcacctactccccacgggacgaggatgatggcatgcctcccatc
agcaccccgcgccgctccgactccgccatctccgtccgctccttgcactccgagtccaac
atgtccctgcgctccacgttctcactccatgaggaagaggaggagccagagcccctggtg
tttgcagagcagccctcagtgaagctgtgctgccagctgtgctgcagtgtctttaaggat
cccgtcatcacaacctgtgggcacacgttttgcaggagatgtgccttaacatctgagaag
tgccccgtggacaacgccaagctgacggtggtggtgaacaacatcgcggtggccgagcag
attggggagctcttcatccactgcaagtacggctgccggcctgccgccagcagcaagaac
cctgccttcgaggtggacccccgtggctgccccttcaccatcaaactcagtgccaggaag
gatcatgagagcagctgtgattacaggcccgtgcgctgccccaacaaccccagctgccct
cccctcctcaaaatgaacctggaggctcacctgaaggagtgtgagcacatcaagtgtcct
cactccaaatatgggtgtgcattcataggaaaccaggacacctacgagacccacctggag
acgtgcaagttcgaggggctgaaggagttcctgcagcagacggacgatcgcttccacgag
atgcaggtggccatggcccagaaggaccaggagatcgccttcctgcgctccatgctgggc
aaactctctgagaaaatcgaccagctggagaagaacctggagctgaagtttgatgtgctg
gatgagaaccagagcaagctgagcgaggacctgatggaattccgcagggacgcctccatg
ctgaacgatgagctctcccacatcaatgctcggctcaacatgggcatccttggatcctat
gatcctcagcagatcttcaagtgcaaagggacctttgtgggccatcagggccccgtgtgg
tgtttgtgtgtgtactccataggagacttgctcttcagtggctcctcagacaaaaccatt
aaggtttgggatacctgtaccacttacaagtgccaaaagaccctggagggtcacgatgga
attgtgctggctctctgcatccaggggaacaagctgtacagtggctctgctgactgcacc
atcattgtctgggatattcagaacctgcagaaggtgaacacgatccgagcacacgacaat
cctgtttgcactttggtctcctcacacaacatgctcttcagtggctccctcaaagccatc
aaggtgtgggatattgtgggaactgagctcaagctgaagaaggagctgacaggtctcaac
cactgggtccgagcactggtggcttcccagaactatctgtacagtggatcctaccagacc
atcaagatctgggacatccggaacctggagtgtgtgcacgtgctgcagacgtcgggaggc
agcgtctactccatcgccgtgaccaaccaccacatcgtgtgtggcacctacgagaacctc
atccacgtgtgggacatcgagaccaaggagcaggtgcgcacgctgaccgggcacgtgggc
acagtctacgccctcgccgtcatctccacgcccgatcaaaccaaagtcttcagcgcgtcc
tacgaccgctcgctcagggtgtggagcatggacaacatgatctgcacccagaccctgctg
cgccaccagggcagcgtcactgccctggccgtgtcccgcggccgcctcttctccggcgcc
gtggacagcactgtaaaggtctggacgtgctaa
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