Agelaius tricolor (tricolored blackbird): 139598512
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Entry
139598512 CDS
T10815
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atrc03009
]
139598512 (DDX55)
Enzymes [BR:
atrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139598512 (DDX55)
Ribosome biogenesis [BR:
atrc03009
]
Eukaryotic type
Pre-60S particles
Helicases
139598512 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
SBF_like
Cas3-like_C_2
SHOCT
AAA_22
Motif
Other DBs
NCBI-GeneID:
139598512
NCBI-ProteinID:
XP_071301083
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MEAVTEGSWSSLPVPLSPGVLRALRELRFHQMTPVQSATIPLFMSNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKMQVGAIIITPTRELAIQIDEVLSHFTKHFPMFSQILLIGG
RNPMEDVEKFKEHGGNIIVATPGRLEDLFRRKAEGLDLASCVKALDVLVLDEADRLLDMG
FEASLNAILDFLPKQRRTGLFSATQTQELENLVRAGLRNPVRISVKEKGVAASNTQKTPT
RLENFYMICKADEKFNQLVHFLRQHKQEKHLVFFSTCACVEYYGKALESLIKQVKIMSIH
GKMKHKRNKIFTEFRKLPGGILVCTDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTA
RIGNVGSALVFLLPMEESYINFLSINQKCPMQEMKPQPNVLDLLPKLKSMALADRAVFEK
GMKAFVSYVQAYAKHECNLIFRIKDLDFASLARGFALLKMPKMPELRGKCFPDFTPVTVN
TDSISFKDKNREKQRQKKLEEQRKEREENQGKKKFVKNKAWSKQKAKREKKKKVTAKRRR
EEGSDIEDEDMEELLNDTRLLKRLKKGKISEEEFEKKLTGNHRLKAETVEDTESEG
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtgactgagggcagctggagctcgctgccggtgccgctgagcccgggcgtg
ctgcgggcgctgcgggagctccgcttccaccaaatgaccccggtgcagtctgcgaccatc
ccgctgttcatgagtaacaaagatgtggctgcagaagcggtcacaggcagtgggaaaacc
ttggcatttgtgattcccatcctggaaattcttctcagacgggaagaaaagttaaagaaa
atgcaggttggagctataattatcaccccaaccagggagttggccattcagattgatgag
gtgctgtcacatttcacaaaacacttccccatgttcagtcagattcttctcattggtggg
aggaaccccatggaagatgttgagaagttcaaggagcatgggggcaacatcatcgtggcc
accccgggccgcctggaggatctgttcaggaggaaagcagaggggctggacctggccagc
tgtgtcaaggctctggatgtgctggtgttggatgaagcagacagactcctagatatgggc
tttgaagccagcctgaatgccattctggactttttgcccaagcagaggaggacaggtctg
ttctcagccacccagacccaggagctggagaacctggtgagggcagggctgcgcaacccc
gtgcgcatctcggtcaaggagaagggggtggcagccagcaacacccagaaaaccccaaca
cgcctggagaacttctacatgatctgcaaggcagatgagaaatttaaccagttggtgcat
tttcttcggcagcacaaacaggaaaagcatctggtctttttcagcacatgtgcctgtgtg
gaatactatgggaaggctctggaatccttaattaagcaggtgaaaataatgagcatccat
gggaagatgaagcacaagcgaaacaagattttcacggagtttcggaagctcccggggggc
attttggtgtgcacagatgtgatggctcgtggcattgacattccagaagtgcactgggtg
ttgcagtatgacccacccagcagtgccagtgcctttgtgcatcgctgcggccgcacggcg
cggatcggcaacgtgggcagcgctctggtgtttctgcttcccatggaagagtcctacatt
aacttcctctcaattaaccaaaagtgtcccatgcaggaaatgaaaccacagccaaatgtg
ctggatcttctccccaagctgaagtccatggccctggctgacagggcagtgtttgagaaa
gggatgaaagcctttgtgtcctatgtccaggcctatgccaaacatgaatgtaacctgatc
ttccggatcaaagatctggattttgccagtcttgccagaggttttgcattgttaaaaatg
ccaaagatgcctgaactaagaggaaaatgttttccagactttactccagtcactgtcaat
acagactccatttcatttaaggataaaaacagggaaaaacagagacaaaagaaattagaa
gaacaaagaaaagaaagagaggaaaatcaagggaaaaagaaatttgtaaagaacaaagca
tggtcaaagcagaaagccaagagggagaagaaaaagaaagtaacagctaaaaggaggcgt
gaagagggctctgatattgaagatgaggatatggaagagctgctgaatgacacaagactc
ttgaaaagattaaaaaagggaaaaattagtgaagaagagtttgagaagaaactaacaggc
aaccacaggctcaaagcagaaactgttgaggacacagagtctgaaggctga
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