Agelaius tricolor (tricolored blackbird): 139598517
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Entry
139598517 CDS
T10815
Symbol
SBNO1
Name
(RefSeq) protein strawberry notch homolog 1
KO
K26273
protein strawberry notch
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atrc03036
]
139598517 (SBNO1)
Chromosome and associated proteins [BR:
atrc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
139598517 (SBNO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
139598517
NCBI-ProteinID:
XP_071301089
LinkDB
All DBs
Position
Unknown
AA seq
1391 aa
AA seq
DB search
MVEPGQDLLLAALSESGISPNDLFDIDSPDVVLANPAPTPAVQQSVPLSALELGLDAEAA
AAVKQEPEAVSTPALLNVRQPPSTTTFVLNQINQLPTLGTTIVVTKTTPVTTSRQTITVA
KIIQTSTTTRPSVAAPAVRNALTTAPSKDQIQLKDLLKNNSLNELMKLKPPPNIAQPVAT
AATDLSNGAVKKEASTKEVARIWINDIKMRSFSPTVKVPAVKEEEEPEEEDEEEMGHAET
YAEYMPIKLKIGLRHPDPVVETSSLSSVTPPDVWYQTSISEETIDSGWLSALQLEAITYA
AQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLGRKRAVWFSVSNDLKYDAER
DLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQL
LHWCGEDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGASE
PRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFSGV
TFKIDEVLLSQEYVKMYNKSVKLWVSARERFQQAADLIDAEQRMKKSMWGQFWSAHQRFF
KYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGVF
QSLIEKHFPAPDRKKLFSLLGIDLTAQSNNNSPRDSPCKENKVKKRKGEEISREAKKARK
TGGLAGSSSDESESESDASDNEESDNESSKFLSSGDDDDFNPFRDESSEDDEDDPWLIRK
EHKKNKEKKKKKSIDPDSIQSALLASGLGSKRPSCFTSTVGTTTSSTNTPANSNTNSSFV
TSQDAVERAQQMKKELLDKLEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSNDD
GSISYESRSELDVPVEILNITEKQRFMDGDKNIAIISEAASSGISLQADRRAKNQRRRVH
MTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALTHG
DRRATETRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSPPPDFPGDFFKDVRQGLIGV
GLINVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFSDTLNAVIQNAKKNGRY
DMGILDLGSGDEKVRKADVKKFLTPGYSTSGHVELYTISVERGMSWDEATKIWAEQTGPD
DGFYLSLQIRNNKKTAILVKEVNPKKRLFLIYRPNTGKQLKLETCADLKKKYKKVPSEDA
LPHWLEQYNSSADTCTHAYWRGNCKKAGLGLVCEVGLRCRTYYVLCGSVLSVWTKVEGVL
ASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLVNLLSTSDQSQQLAVQQQQIWQQH
HPQSITNLNNA
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccaggacaagatctgttgcttgctgctttgagtgagagtggaatcagtcca
aatgatctctttgatattgactctccagacgtggttcttgcaaatccagcaccaactcca
gctgttcagcagtcggtgccgctcagcgccttggagctggggctggacgctgaggctgca
gctgctgtgaaacaagaaccagaggctgtctccactccagccttgttaaatgttcggcaa
ccaccatccaccacaacctttgtgctgaatcaaataaatcagcttccaactctggggacg
accatagtggtgacaaaaacgacgcctgtcacgacctcgcggcagacgatcaccgtagcc
aagatcatccagaccagcacaaccacccggccctcggtggcagcaccagcagttcgcaat
gccttgaccactgcaccttccaaggaccagattcagctgaaagatctgctcaagaacaat
agtcttaatgaactcatgaaattgaagccacctcctaatattgcccaaccagtagcaaca
gcagcaactgacctaagcaatggtgcagtgaagaaggaggcttccacaaaagaggtagca
agaatatggataaatgacattaaaatgagaagtttttcaccaactgtgaaagtgccagca
gtaaaagaagaggaggaacctgaggaagaagatgaagaagaaatgggccatgcagagacc
tatgctgaatatatgccaataaaattaaaaattggtctgcgtcatcctgacccagtagtg
gaaaccagctccttatccagtgtgactcctcctgatgtgtggtaccagacatcaatatca
gaggaaaccattgacagtggctggttgtcagctttgcagctggaagcaatcacttatgca
gcccagcaacatgaaacattcctgcccaatggagacagagctggattcttgataggtgat
ggtgctggtgtaggaaaaggaaggaccatagctggaataatctatgaaaattacttgtta
ggcagaaaaagagcagtctggtttagcgtgtcaaatgatctgaaatacgatgctgagaga
gatttgagagatattggagccaaaaacatattggtgcattcattaaacaagttcaagtat
gggaagatttcttccaaacataatggaagtgtgaagaaaggggtcatctttgctacctat
tcttctcttattggggaaagtcagtctggtggtaaatacaaaaccagattaaagcagctt
cttcactggtgtggtgaagatttcgatggagttattgtatttgatgagtgtcataaagca
aagaatctgtgtcctgttggttcatcaaaaccaacaaaaacaggtctggctgtattggaa
cttcaaaataaacttccaaaagccagggttgtttatgccagtgccacaggtgcatctgag
ccaaggaacatggcatatatgaaccgtcttggaatatggggtgaaggaaccccatttagg
gaattcagtgattttattcaggctgttgaaagaagaggtgttggtgccatggaaatagtt
gctatggatatgaagctgagaggaatgtacatagccagacagttgagtttttcaggtgta
actttcaaaatcgacgaagttctgctctcacaggaatatgttaaaatgtacaataaatct
gtgaaactgtgggtcagtgctcgagagaggtttcagcaggcggccgatctcatcgatgcc
gagcagcgcatgaagaaatccatgtggggccagttctggtcagctcaccagaggttcttc
aagtacctttgcatagcctccaaggtgaagagagtggtgcagctggctcgggaagaaatc
aagaatggcaaatgtgttgtcattggcctgcagtcgacaggagaagccagaacattggaa
gctttggaggaaggtggtggggaactgaatgacttcgtttctacagcaaaaggagtattc
cagtctcttattgagaagcactttccagctcctgacaggaagaagctgttcagcttgttg
ggaattgacctgactgctcaaagtaataacaattcaccccgagacagcccttgcaaggag
aacaaagtaaagaaacgaaaaggtgaagaaataagcagagaagccaaaaaagcccgcaaa
acaggtggccttgcagggagcagctctgatgagagtgagagtgagtctgatgcttcagac
aatgaagaaagtgacaatgagagctccaaatttttgagttctggagacgatgatgacttc
aacccgttcagagatgaatccagtgaggatgatgaagatgatccctggttgattagaaaa
gagcataaaaaaaataaagaaaagaaaaagaagaaaagcatagacccagattctattcaa
agtgccttactagcctctggtctgggatccaaacgacccagctgcttcacttccactgtt
ggaaccaccacttctagtaccaacacgcctgcaaacagtaacacaaacagcagctttgta
acgagtcaggatgctgttgaaagggcccaacaaatgaaaaaagaactgctggataaactg
gaaaagctggctgaagatcttccacctaatacactggatgagcttatagatgaactgggt
ggtcctgaaaatgttgcagagatgaccggccgcaaaggcagagtggtgagcaacgacgac
ggcagcatctcctacgagtccaggtctgagctcgatgtgcctgtggaaatcctcaacatc
acagagaagcagaggttcatggatggagataagaacattgccatcatctcagaggctgcc
agctctggtatctcactgcaagcagaccgcagggccaagaaccagcggcggagggttcac
atgaccctggagctgccgtggagcgcggacagagcaatccagcagtttggaagaactcat
agatccaaccaagtgactgctccagagtatgtgttcctcatttctgaactggcaggagag
caaagatttgcatctatagttgcaaaaagactggagagtttgggagccctcacccatggg
gacagacgggccacagaaactcgagacctcagcagattcaattttgacaacaagtatggc
agaaatgctctggagattgttatgaaatccattgtgaacttggactccccaatggtctca
cctcctcctgattttcctggagacttcttcaaagatgttcgtcagggattgattggtgta
ggcttgataaatgtggaagacagatctggaatcctgacccttgataaagattacaacaat
atagggaaatttctgaatcgaattcttggcatggaagtccatcagcagaatgctttgttc
cagtacttctctgacacgttaaatgcagttatccaaaatgctaaaaagaatggaagatat
gacatgggcatcttagacttgggctctggggatgagaaagtgaggaaggcagatgttaag
aagtttttaactcctggatattctacctctggccatgtagagctgtacacaatcagtgtg
gagagaggaatgtcttgggatgaagcaacaaagatctgggcagaacaaacaggtccagat
gatggattttatttatcactacagataagaaataacaagaaaacagcaattctagtaaaa
gaagtgaatcctaaaaagaggctttttttgatatacagaccaaatactgggaaacaactc
aaactagagacatgtgcagacctgaaaaagaaatacaagaaggtaccttctgaggatgct
ctgccacactggctggagcagtacaactcctctgcagacacctgcacccacgcctactgg
agaggcaactgcaagaaggcaggcctggggctggtctgtgaggtggggctgcgctgcaga
acctactacgtgctctgtggctccgtgctgagcgtgtggacgaaggtggaaggggtgctg
gcctccgtcagcggcaccaacgtcaaaatgcaaatcgtgcgcctgaggacagaggatggg
cagaggatcgtaggtttgatcattcctgcaaattgtgtgtcgcccctcgtgaacctcctg
tcgacgtccgaccagtcgcagcagctcgcagtgcagcagcagcagatctggcagcagcac
cacccccagagcatcaccaacctcaacaacgcatga
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