KEGG   Agelaius tricolor (tricolored blackbird): 139598615
Entry
139598615         CDS       T10815                                 
Symbol
USP30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
  KO
K11851  ubiquitin carboxyl-terminal hydrolase 30 [EC:3.4.19.12]
Organism
atrc  Agelaius tricolor (tricolored blackbird)
Pathway
atrc04137  Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:atrc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    139598615 (USP30)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:atrc01002]
    139598615 (USP30)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:atrc04131]
    139598615 (USP30)
   04121 Ubiquitin system [BR:atrc04121]
    139598615 (USP30)
Enzymes [BR:atrc01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     139598615 (USP30)
Peptidases and inhibitors [BR:atrc01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   139598615 (USP30)
Membrane trafficking [BR:atrc04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    139598615 (USP30)
Ubiquitin system [BR:atrc04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    139598615 (USP30)
SSDB
Motif
Pfam: UCH UCH_1 DUF5700
Other DBs
NCBI-GeneID: 139598615
NCBI-ProteinID: XP_071301312
LinkDB
Position
Unknown
AA seq 477 aa
MRSWGVLGGAAAALAAGIYVLWGPISGRKRRRRGLVPGLLNLGNTCFMNSLLQGLSSCPS
FIRWLEEFTAQYRTEQEQPQEQPQHLSVTLLQLLRALSCQEVPEDDVLDASCLLEVLRMN
RWQISSFEEQDAHELFHVLTSSLEDERDRQPRVAHLFDVHSLEQPEIIQKQISCRTRGSL
PPVSNHWKSQHPFHGRLTSNMVCKHCEHQSPVRFDTFDSLSLSIPAAVWGRPMTLDHCLH
HFISSESVKDVVCDNCTKIQAQGILNGQSIENQRTTFVKQLKLGKLPQCLCIHLQRLSWS
NQGTPLKRHEHVQFNEFLVMDIYKYRVPGAKSCQEQLSQKNPEETMSGIKDGRAGKPSDA
EQPAGTKPLFMNGASSSSSSPSFLMSPGTFPLAAFPECRAPLYLYRLMAVVVHHGDMHSG
HFVTFRRAPGARGSQWLWISDESVRRASLHEVLAASAYLLFYERVHGRGQPQSPAQS
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgcggagctggggggtgctcgggggcgcggcggcggcgctggcggccgggatttatgtc
ctgtggggccccatcagcggcaggaaacggcggcggagagggctcgtgccaggcctcctg
aacctgggcaacacgtgtttcatgaattccctgctgcagggcttgtcctcctgcccctcc
ttcatcaggtggctggaggagttcacagcccagtacaggacggagcaggagcagccccag
gagcagccccagcacctctcagtgactctgctgcagctcctcagagctctgtcgtgccag
gaggtgccagaggacgatgtcctggatgccagctgcctgctggaggtgctcaggatgaac
aggtggcagatctcctcctttgaggagcaggatgcccatgagctgttccatgtcctgacc
tcttccctggaggacgagcgggatcggcagccccgtgtggcccatctgtttgatgtgcat
tccctggagcaaccagaaataatccaaaagcaaataagctgcagaacaagaggatcactt
ccccctgtgtccaaccactggaaatctcagcaccctttccatggaaggctgaccagcaac
atggtctgcaaacactgtgagcaccagagccctgtgaggtttgacacctttgacagcctc
tccctgagcattccagcagctgtgtggggtcgtcccatgacactggaccattgcctccat
cacttcatctcctcagagtctgtcaaggatgttgtgtgtgacaactgcaccaaaatccag
gcacaaggaattctgaatgggcagagcatagaaaaccagagaacaacatttgttaagcaa
ttaaaattaggaaagctgccccagtgtttgtgcatccacctgcaaaggctgagctggtcc
aaccaaggcactcccctgaagagacacgagcacgtccagttcaacgagttcctggtcatg
gacatctacaaatatcgagttcctggtgccaaatcctgccaggagcagctcagccagaaa
aaccctgaggagacaatgtctggaataaaggatgggagagcagggaaaccttcagatgca
gaacaaccagctggtaccaaacctctcttcatgaatggtgcctcctcttcttcctcctct
ccctcatttttaatgtccccaggaactttcccacttgctgcattccctgagtgcagggcc
ccgctgtacctgtaccgcctgatggccgtggtggtgcaccacggggacatgcactcggga
cacttcgtcaccttccggcgcgcgccgggcgcccgcggcagccagtggctctggatctcg
gacgagtccgtgcgcagggccagcctgcacgaggtgctggcagccagcgcctacctgctg
ttctacgagcgcgtgcacggccggggccagccccagagcccggcccagagctga

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