Agelaius tricolor (tricolored blackbird): 139598643
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Entry
139598643 CDS
T10815
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atrc03041
]
139598643 (TFIP11)
Spliceosome [BR:
atrc03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
139598643 (TFIP11)
Other components
Complex C specific factors
139598643 (TFIP11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
139598643
NCBI-ProteinID:
XP_071301368
LinkDB
All DBs
Position
Unknown
AA seq
827 aa
AA seq
DB search
MSMSHLYGTDGDDGVEMESFEVSDWDLQNEFNPHRQRHRQTKEEATYGVWAERDSDEERP
SFGGKRSRDYSAPVSFVSAGLRKAAAEELSNEDSDDDEKPVKQEEIPKEFVPKKLKTGGN
FKPSQKGFVGGSKSFVDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQR
KGKGAVGAYGSERTTQSLQDFPVVDSEEETEEEFQKELSQWRKDPNGGKKKPKYSYKTVE
ELKAKGRISKQLAAPQKELSQVKVIDMTGREQKVYYSYSQISHKHNIPDDSPQQPLGKDS
KPQGFALPELEHNLQLLIDITEQEIIQSDRQLQYERDMVVNLSHEIQKMAEVLSHEEKAI
SNLSKVLDMVEECERRMQPGCENPLTLDECAKIFETLQDKYYEEYRMSDRVDLAVAIVYP
LMKEYFKNWDPLKDCTYGTEIIAKWKSLLENDQLLSHSGQDLSTDAFHRLMWEIWMPYVR
NIVARWQPRNCGSMVDFLDSWVNVVPVWILDNILDQLIFPKLQKEVESWNPLTDTVPIHS
WIHPWLPLMQARLEPLYSPIRNKLANALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVK
NIVPKLGMCLNELIINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFPKWLQVLCSWL
SNSPNYEEITKWYLGWKSMFSDQVLAHPSIKDKFNEALDIMNRAVSSSVGGYMQPGAREN
IAYLTHTERRKDFQYEAMQERREAENMAQRGIGAAAGSVPMNFKDLIQTKAEEHNIVFMP
VIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgcacctgtacggcacggacggagacgatggcgtggagatggagagcttc
gaggtgtcggactgggatctgcagaacgaattcaacccgcaccggcagcgacaccgccag
accaaggaggaggcgacctacggcgtgtgggccgagcgcgactcggacgaggagcggccc
agcttcggagggaagcgctccagggattactcggcccccgtgagctttgtgagcgctggg
ctgaggaaggcggcggccgaggagctctcgaatgaggactcggatgatgatgagaagcct
gtgaagcaggaggagattcccaaggagtttgtgcccaagaagttaaagacaggtggaaat
ttcaagcccagccagaaaggcttcgtaggaggctccaagtcctttgtggattttggcagc
tgggagagacacactaaaggcattgggcagaagcttctccagaagatgggatatgtccct
ggaaggggtctggggaagaatgctcaaggaatcatcaaccccatcgaggccaagcagagg
aaaggcaaaggtgctgtgggcgcttatggctccgagaggaccacgcagtccttgcaggac
ttccctgtggtggactcagaagaggaaactgaggaggagtttcagaaggagctcagccag
tggcggaaggacccgaacggaggcaagaaaaagcccaagtacagctacaaaacagtggaa
gagctgaaagccaaaggcaggatcagcaagcagcttgcagcccctcagaaggagctgtcc
caggtcaaggtgatcgacatgacgggccgggagcagaaggtttattacagctacagccag
atcagccacaagcacaacatcccagatgacagcccccagcagcccctgggcaaggactcc
aagccccagggctttgccctgcccgagctggagcacaacctgcagctgctcatcgacatc
acggagcaggagatcatccagagcgaccggcagctgcagtacgagagggacatggtggtc
aacctcagccacgagatccagaagatggctgaggtgctgtcccacgaggagaaggccatc
agcaacctcagcaaggtgctggacatggtggaggagtgtgagaggcggatgcagccgggc
tgtgagaaccctctgaccctggatgagtgtgcaaagatctttgagaccctgcaggacaag
tactacgaggagtacaggatgtcagacagggtggacctggcagtggccatagtttatccc
ctcatgaaggaatacttcaagaactgggatcccctcaaggactgtacatacggcacagag
atcatagccaagtggaagagccttctggaaaacgatcagctgttatcccacagtgggcag
gacctgtcaacagatgcttttcacagactgatgtgggagatctggatgccatatgtcagg
aacatcgtggcgcggtggcagccgaggaactgtggatccatggtggatttcttggatagc
tgggtgaacgttgtccctgtgtggatactggataacattctggatcagctcatcttcccc
aagctgcagaaggaggtggagagctggaaccctctgacagacacggtgcccatccactcg
tggatccacccctggctgccgctgatgcaggcgcgcctggagccgctgtactcgcccatc
cgcaacaagctggccaacgccctgcagaagtggcaccccagcgactcctctgccaagctc
atccttcagccctggaaggatgtgttcactcctggctcctgggaggctttcatggtcaag
aacatcgtgcctaaactcggaatgtgcctgaatgagctcatcatcaaccctcaccagcag
cacatggatgctttttactgggtgattgactgggaggggatgatttctgtctccagcctt
gttgggctgctggagaaacacttcttcccaaaatggctgcaggtgctctgctcttggctc
agtaacagccccaactacgaagagatcaccaagtggtacctgggctggaagtccatgttc
tcagaccaggtgctggcacatccctccatcaaagacaagttcaacgaagcccttgacatc
atgaacagggctgtgtcctccagcgtgggtgggtacatgcagccgggtgcccgggagaac
atcgcgtacctgacgcacacggagcggcgcaaggacttccagtacgaggccatgcaggag
cggcgcgaggccgagaacatggcccagcgcggcattggcgccgccgccggctccgtgccc
atgaacttcaaggacctcatccagaccaaggccgaggagcacaacatcgtcttcatgccc
gtcatcgggaagaggcacgagggcaagcagctctacaccttcggcaggatcgtcatctac
atcgacaggggcgtggtgttcgtgcaaggggagaagacctgggtgcccacctcgctgcag
agcctcatcgacatggccaagtga
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