Agelaius tricolor (tricolored blackbird): 139598713
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Entry
139598713 CDS
T10815
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain 2 isoform X1
KO
K04646
clathrin heavy chain
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04142
Lysosome
atrc04144
Endocytosis
atrc05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139598713 (CLTCL1)
04142 Lysosome
139598713 (CLTCL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
139598713 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atrc04131
]
139598713 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atrc04147
]
139598713 (CLTCL1)
Membrane trafficking [BR:
atrc04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
139598713 (CLTCL1)
Exosome [BR:
atrc04147
]
Exosomal proteins
Proteins found in most exosomes
139598713 (CLTCL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
139598713
NCBI-ProteinID:
XP_071301541
LinkDB
All DBs
Position
Unknown
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPTT
PIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWISVNTVA
LVTETAVYHWSMEGESQPQKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAEFKIEGNAKPSTLFCFAVRSPAGGKLHIIEVGQPATGN
QPFVKKAVDVFFPPEAQTDFPVAMQIGIKHGVIYLITKYGYIHMYDLESGVCIYMNRISA
DTIFVTAPHEPTSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRMAIRSNLAGA
EELFARKFNTLFAQGNYADAAKVAASAPKGILRTSDTIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRVSPEQGLQFSQMLVQDE
EPLANINQIVDVFMEHSLLQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYMEV
VQAANRNDNWEDLVKFLQMARKKARESYVETELIFALAKTNRLSELEEFISGPNNAHIQQ
VGDRCYEEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFAC
VDGKEFRLAQICGLHIVIHADELEELISYYQDRGYFEDLIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVNFFS
KVNQLFLVKPYLRSVQNHNNKGVNEALNNLLTEEEDFQGLRASIDAYDNFDNITLAQRLE
KHELIEFRRIAAYLYKGNNRWKQSVELCKKDRLYKDAMQYAAESKDAELAEKLLQWFLEE
GKQECFAACLFTCYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDGLFYKVDKL
DASESLRKEEEQVAEPTPIVFGQQLMLTAGPSAVPPQANFPYGYTAPGFTQPPVYGFNM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatactgcccattcgcttccaggagcacttccagctccaaaatttgggcatt
aatccagcaaacattggattcagcaccctaacaatggagtctgacaagttcatctgcata
agggagaaagtaggagagcaggcacaagtagtgataattgacatgagtgatccaacaaca
cccatcaggcgtccaatttctgcagaaagtgccatcatgaatccagcctctaaagtaata
gcgctcaaagctgggaaaacacttcagatctttaacattgagatgaaaagtaaaatgaaa
gcccacacaatggctgaggaagtgatcttctggaaatggatatctgtgaatacggttgcc
ttggtgacagagacagcagtgtaccactggagcatggagggagaatcacaaccccaaaag
atgtttgatagacatgctagtcttgcaggctgccaaatcatcaattacagaacagatgaa
caccaaaaatggctgctgctgataggaatttcagcacagcaaaatcgtgtggttggtgca
atgcagctgtactcggttgacagaaaagtctcccaacctatagaaggccatgcagcagct
tttgcagaattcaaaatagagggaaatgccaaaccttctaccctcttctgttttgctgtg
aggagtcctgcaggaggcaagctgcacataatcgaagtaggtcagccagctactggaaat
cagccatttgttaagaaagctgttgatgtgtttttcccacctgaggcacagacagacttt
cctgtggcaatgcagattggaattaagcatggtgtgatttatctgatcacgaagtatgga
tatatccacatgtatgatttggagtctggagtgtgcatctacatgaaccgtattagtgct
gacactatctttgtcacagctcctcatgaacctacctcaggcattattggtgtgaacaaa
aaaggacaggtgctttctgtctgtgttgaggaagacaacattgtgaactatgctacaaat
gttctccagaatcctgacttgggactgcgaatggctatacggagtaacctagccggggca
gaggagttatttgccagaaagttcaacacactgtttgctcaaggaaactatgcagatgct
gctaaagtagctgcatctgcaccaaagggaattctacgtaccagtgatacaattaggaag
ttccagagtgtaccagctcagcctgggcaggcctctcccctgctccagtactttggaata
ttgctcgaccagggacagctgaacaagtttgaatctctggagctctgccgccccgtcctg
cagcagggccgcaaacagcttctggagaagtggctgaaggaagacaagctggagtgctcg
gaggagctgggagacttggtgaagacggctgacccaacccttgcactcagcgtctacctt
cgagctaatgtgccaaacaaagtgatccagtgctttgctgaaactggccaattccagaaa
atagtgctgtatgctaagaaggttggctatacccctgactggatcttcctactgagaagt
gtgatgagagtcagtccagaacaaggcctgcagttctctcagatgctggtacaggatgag
gagccactggctaacattaaccagattgtggatgtgttcatggagcacagtcttctgcag
cagtgcacatcctttttgttggatgccctgaaaaataaccgccctgcagaaggccacctt
cagacccgtctcctggaaatgaatttgattcatgccccacaggttgcagatgccattctc
ggaaaccaaatgtttacgcactatgatcgtgctcatgttgcccagctgtgtgaaaaggca
ggcttgctgcagcgagctttggaacactacacagatctctatgatattaaacgtgcagtt
gttcatactcacctcttgaatcctgagtggcttgtgaacttctttggctccctctcagtt
gaggactctgtggagtgtttgcgtgccatgctgtcagccaacattcggcaaaacctacag
ctctgtgtgcaagttgcttctaaataccatgaacagcttggcacccagtctcttgtggag
ctttttgaatctttcaaaagctatgaaggactgttctatttcttgggttccattgtaaac
tttagccaggatccagatgttcacttcaagtacatccaggcagcttgcaagactggtcag
ataaaggaagtggaaagaatctgtcgtgaaagtaactgctataacccagaacgagtgaag
aacttcctgaaggaggcaaagctcacagatcagcttcctctcatcattgtctgtgatcgg
tttgactttgttcatgacctggtgctctatttatatcgcaataatctgcagaagtatatc
gagatctatgtacagaaggtgaatcctagccggataccagcagtggttggagggcttctt
gatgtagattgttctgaagatgtcatcaagaacttgatcatggtggtgagagggcagttc
tccacagatgagctggtggctgaagtggaaaaaagaaatcggcttaagttgctgttgcca
tggcttgaatcaaggattcatgaaggctgtgaagaacctgcaactcataatgctttggcc
aaaatctacattgacagtaataataatccagagcgcttccttcgtgagaatccttactat
gacagccgtgtagttggcaaatattgtgaaaagagggaccctcatctggcctgcgttgct
tatgagagggggcagtgcgatctggaactcataaaggtgtgcaatgagaactccctgttt
aagagcgaggctcgctacctggtgcgcaggaaggaccctgagctctgggcaaatgtactg
gaagaaaacaacccgttcaggcggcagcttattgaccaggttgtccaaacagctttatca
gagacacaggatccagaggaagtttctgtaactgtgaaagctttcatgactgctgatctg
ccaaatgaactgattgagttattggaaaaaattgtcttggataattctgtattcagtgaa
cacaggaatctgcagaatctgctgatcctaactgccattaaggccgaccgcacccgagtg
atggaatacatcaatcggctggataactatgatgccccagatattgccaacattgccatc
agtaatgagctatatgaggaagcctttgctatattcagaaaatttgatgtcaatacttca
gcaattcaggtgctgattgagcacattggcaacttagaccgtgcttatgaatttgcagag
agatgtaatgaaccagcagtgtggagccaactggccagagcacagctccagaaggacttg
gtgaaggaagccattgactcctatataaaggcagatgatccatctgcctacatggaagtc
gttcaggcagctaataggaatgataattgggaggacctagtcaagttcttacagatggcc
aggaagaaggctagagagtcttacgtagagacagaacttatttttgctttggcaaaaact
aatcgtctgtcagaactggaggagtttattagtggccctaataatgcccatatacaacag
gtcggtgatcgctgttacgaagaggggatgtacgaagcagcaaaacttctctataacaac
gtatccaactttgctcgcctggcatctaccttggtgcaccttggggagtatcaggcagca
gtggacagtggccgcaaagccaatagcacaaggacttggaaggaggtctgctttgcctgt
gtggatggaaaagaattccgcttggcacagatctgtggcttacacatagtcatccatgct
gatgaacttgaggagctgatcagttactatcaggatcgtggctactttgaagacctcatt
gcccttttggaagctgctctgggcctagagcgtgctcacatggggatgtttactgaactt
gccatcttatactccaaattcaaacctcagaaaatgagggaacatctggaacttttctgg
tctagagttaatattccaaaggtgctcagagctgcagaacaggctcatctctgggcagaa
cttgtattcctgtatgacaagtatgaggagtatgacaatgcaataattactatgatgaat
catcccactgatgcctggaaagaaggccagtttaaagacataattgccaaggtggccaat
gtggagctgtactacaaagctttgcagttctacttagactacaaacctctgctgatcaat
gatctcctgcttgtattgtctccacgactggatcacaccaggacagtcaattttttctca
aaggttaatcagctatttctagtaaagccttacctgcgttcagtccagaaccacaacaac
aaaggagttaacgaagctctaaacaaccttttaacagaagaggaagatttccagggtttg
agagcttccattgatgcctatgacaactttgataacataacattggctcagcgtctggaa
aagcatgaactaattgaatttaggcgtattgcagcgtacttgtacaagggtaacaaccgc
tggaaacagagcgtggagctgtgcaagaaagaccgtctgtataaggatgctatgcagtat
gctgcagagtccaaagatgcagagctggctgagaagctgctccagtggttcttggaagaa
ggcaagcaggagtgctttgcagcctgccttttcacatgctatgacttgctgcacccagat
gtagtccttgagttggcatggagacataacatcatggactttgcaatgccttatttcatc
caagtgatgagagagtaccttaccaaagttgatggactattctataaggtggataaactt
gatgcttctgaaagcctaagaaaagaagaggaacaagtagctgaacccactccaatagta
tttggccagcagttgatgttaacagcaggccccagtgcagtacctccccaggcaaacttc
ccatatggatacacagcaccaggattcacccagccgcctgtttatggtttcaatatgtaa
DBGET
integrated database retrieval system
