Agelaius tricolor (tricolored blackbird): 139598787
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Entry
139598787 CDS
T10815
Symbol
DEPDC5
Name
(RefSeq) GATOR1 complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
139598787 (DEPDC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atrc04131
]
139598787 (DEPDC5)
Membrane trafficking [BR:
atrc04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
139598787 (DEPDC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
139598787
NCBI-ProteinID:
XP_071301689
LinkDB
All DBs
Position
Unknown
AA seq
1601 aa
AA seq
DB search
MRTNKVYKLVIHKKGFGGSDDELVVNPKVFLQIKLGDVVEIAHPNDEYSPLLLQVKSLKE
DLQKETISVDQTVAQVFRLRPYQDVHVNVVDPKEVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYVTQKVEFAGIRAQAGELWVKSEKVTCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYEAKSIDEFPETHRA
SIRQDHEGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAEGFPSGYNST
SAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRCGPGDSRMGDDYNIPHWINHSFYTSKSQLLCNSFT
PRIKLAGRKPLTEKAKNNRDASLGAPKDAENALPIQVDYDGYDAQVFRLPGPARAQRCAT
FRSVRERESRTRKSSSSYDVSCSPSLQGRALPPEEVRSQASDDSSLGKISNILMIPRPHL
HHCEVSSSLGYTSTRDFLENMLESQQRDSSAPGRFHVGSAESLLHIRPGGYAPQRALINP
FAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAEMQGSGQQDLTHSSAELLE
LAYHEATGRHGSSRHPGDGGSFLSFGGTEEFGNGNGLGAGPGAGVNLKTQNKDSLEDAVS
NSPDPILTLSAPPIVPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQSLQNDYTEGCYDLL
PEADMDRRDEEGVQMTAQQVFEEFICQRLMQGYQIIVQSKPQKPAPAVPPPLSSSPLYSR
GLVSRNRPEEEDQYWLSMGRTFHKVTLKDKIITVTRYLPKYPYESAQINYTYSLCPSHSD
SEFVSCWVEFSHERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACISATKR
IMEGEAHCDVYGDKPRSDEEEWQLLDGFIRFVEGLNRIRRRHRSDRMIRKGSAMKGLQIA
GPIPTHSLEQSGPPIGKKGTSALSALLQMEASQKTLGEQQAAMLSGKSSGQPSESGSIAI
TPTYMDSPRKDGAFFMDFVRSPRTASTFYSQVSIDQSVPASSDGSTLLPMGQVPDRGSSQ
GSTQNAAEPGYSTAAAAEGSSQQCSTSALTSSSTLVEILEAMKHPTTGIQLLSEQKGLSP
YCFISAEVVHWLVNNVEGVHTQAMAIDIMQKMLEEQLIVHASGEALRTFIYGFYFYKIVV
DKEPDRVGLQQPAMWHTAAMDDFSAFQRKWFEVAFVAEELLHSEIPAFLLPWLPSRPASY
ASRHSSFSRSFGGRSQAAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSLNAA
FEIKLHWMAVTAAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDPLRAQLFIPL
NVSCLLKEGSEHLFDGFEPETYWDRMHLLQEAIAHRFGFVQDKYSASAFNFPAENKPQYI
HVTGTVFLQLPYSKRKFSSGQQRRRRNSTSSSTQNLFCEERIGYNWAYNTMLTKTWRSSA
TGDEKFADRLLKDFTDFCWNKDSRLVAFWTDCLDKMHASAP
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaacaaggtgtacaagctcgtcatccataagaaggggtttggaggcagtgat
gatgaactggtggtgaatcctaaagtatttcttcaaatcaagctgggagatgttgtggaa
attgcacatcccaatgatgaatacagtcccctgcttctccaagtgaagtcacttaaggaa
gatctgcagaaagaaaccataagtgtggaccagacagtggcacaggtgttccgcctgcgg
ccgtaccaggatgtccatgtcaacgttgttgaccccaaggaggtgaccttggacttggtg
gagctgacatttaaagatcagtacattggccgtggggatatgtggaggctgaagaagagt
ttggtcagcacatgtgcatatgtcacccaaaaagttgaatttgcgggtatcagagcccag
gcaggtgaactgtgggtaaagagtgagaaagtcacttgtggatacatcagtgaggacacc
cgggtggtcttccgctccacttctgccatggtttatatttttatccagatgagctgtgag
atgtgggattttgatatttatggggatctatactttgagaaagctgtgaatggtttcctt
gctgacctcttcacaaaatggaaggagaagaattgcagccatgaagtgacagtggttcta
ttttcaagaacattttatgaagcaaaatctatagatgagtttcctgaaacacatcgtgca
tcaattcggcaggatcacgagggaagattttatgaagatttttacaaagttgtagtgcag
aatgagaggcgggaggagtggacctccttgcttgtgaccattaaaaagcttttcatccag
tatcctgtgttggtacgactcgagcaagcagagggttttccttcaggttacaattccacc
tcagcacaagggaactacctggaggctataaatctttccttcaatgtgtttgacaagcat
tacatcaaccgcaacttcgaccgcacggggcagatgtcggtggtgatcacgcccggcgtg
ggggtgttcgaggtggatcggctgctcatgatcctcaccaagcagcgcatgattgacaat
gggataggtgtggatttggtgtgcatgggagagcaacccttgcatgctgtcccactcttt
aagctccataatcgttgtggccctggtgactcacgaatgggtgatgactacaatatccca
cactggataaatcatagtttctacacatccaaaagccaactcctgtgtaacagcttcact
ccacggatcaagctggcaggaaggaagccactgacagagaaagcaaaaaataatcgtgat
gcctcattaggagctccaaaggatgctgagaatgccttgcccatccaggtggattatgat
ggctacgatgcccaggtgttcagactgccaggcccagccagagcccagcgctgcgccact
ttcaggtcggtgcgggagcgcgagagccgcaccaggaagagctccagctcgtacgacgtc
tcgtgcagcccgtccctgcagggccgcgcgctgccccccgaggaggtgaggagccaggct
tctgacgacagctccctgggcaagatctccaacatcctgatgatcccacggccccacctg
caccactgtgaagtcagcagctccttgggctacaccagcaccagagatttccttgagaac
atgttggagtcacagcagcgcgactccagcgccccggggcggttccacgtgggcagcgcc
gagtccctgctgcacatccgcccgggggggtacgcgccgcagcgcgccctcatcaacccc
ttcgccccgtcccgcatgcccatgaagctgacatcgaaccgcaggcgctggatgcacacc
ttccccgtgggtccctcaggagaagctatccagatccatcatcagacccggcagaacatg
gcagaaatgcagggcagtgggcagcaggacctgacacattcctctgcagagctgctggag
ctggcttaccatgaggcaactggcaggcacggcagctctcggcatccgggggatggcggc
tccttcctgagcttcggcgggacggaggagttcgggaacgggaacgggctgggggccggc
cccggcgcaggggtgaacctcaaaactcagaacaaggattccttggaagatgctgtctct
aattctccagatccaattctgacgctgtctgctccccccatagtgccaggcttctgttgt
acagttggagtggactggaagtccctgaccacccctgcctgcctgcccctcaccaccgat
tacttccccgaccgccagagcctgcagaacgactacaccgagggctgctacgacctgctg
cccgaggctgacatggacaggagggatgaggaaggagtgcagatgacagcccagcaggtg
tttgaggagttcatttgtcagcgcctcatgcagggctatcagatcattgtgcagtccaag
ccgcagaagccggccccggccgtgccgcccccgctcagcagcagccccctgtacagcaga
ggtcttgtgtcaagaaatagacctgaggaagaggatcagtactggctgagcatgggccgg
actttccacaaagtcaccttaaaagacaaaatcattactgtgactcggtacctgcctaag
tatccatatgaatctgctcagataaactacacctacagcttgtgcccctcacactctgac
tctgaatttgtctcttgctgggtggaattttcccatgagagactagaagagtacaagtgg
aattacttggatcagtatatctgctctgctggctcagaggatttcagcctgatcgagtcg
ctgaagttctggaggacgcggttcctgctgctgcccgcctgcatcagcgccaccaagcgc
atcatggagggggaggcgcactgcgacgtgtacggggacaagccccgctcggacgaggag
gagtggcagctcctcgatggcttcatccgcttcgtggagggcttgaaccgcatccgccgc
cgccaccgctccgatcgaatgatccgaaaagggtctgccatgaaaggcttgcagattgct
ggtccaattcccactcactccctggagcagtctggacctcccattgggaaaaaaggaacc
tcagcactctcagctctgctgcagatggaagccagtcagaagaccctgggggagcagcag
gcagccatgctttctgggaagagctctggccagccttcagagagtgggagcattgctatc
acacccacctatatggacagccctcgcaaggatggggccttctttatggactttgttcgc
agcccacgcacagcttcaaccttctactcccaggtctctattgatcagtcagttcctgca
tcctcagatggcagcaccttgctacccatggggcaggtccctgacaggggcagcagccag
gggagcacccagaacgctgcagagccaggatacagcacagctgctgctgcagagggcagc
tctcagcagtgttcaacaagtgctctgacttcctcctccactttggtagagattcttgaa
gccatgaaacaccccaccacagggatccagctgctctctgaacagaaggggctctccccc
tactgcttcatcagtgcagaggttgtgcactggctggtgaataacgtggaaggggtgcac
acccaggccatggccattgacatcatgcagaaaatgttagaagagcagcttattgtccat
gcatctggagaagctttacgaacctttatttatggcttttatttttacaagattgttgtg
gacaaagaaccagaccgagtggggctgcagcagcctgccatgtggcacacagctgccatg
gatgacttctcagccttccagaggaaatggtttgaggtggcctttgtggcagaagagctg
ctgcactcggagatcccggcgttcctgctgccctggctgcccagccgccccgcctcctat
gcaagtaggcacagttcctttagccgcagtttcggaggacggagccaggcagctgcactc
ttagctgccacggtgcccgagcagcgcacggtgacgctggatgtggatgtgaacaaccgc
acggaccggctggagtggtgcagctgttattaccatggcaacttctccctgaacgctgcc
tttgagatcaagttacactggatggcagtgactgcagctgttctttttgagatggttcag
ggctggcacaggaaggccacctcctgtgggttcctgctggtgccagtgctggaaggcccc
tttgccctgcccagttacctgtacggggacccgctccgagctcagctcttcatccccctc
aacgtcagctgcttgctgaaggagggcagtgagcatttgtttgatggctttgaaccagaa
acatactgggacagaatgcatcttctgcaggaagcaatagcacacagatttggatttgta
caagataaatattcagcctctgcattcaacttcccagcagaaaacaagccccagtatatc
catgtcacagggacagtgtttttgcagctgccctattccaagaggaagttctccagcggg
cagcagcggcgccggcgcaactccaccagctccagcacccagaacctgttctgtgaggag
cgcatcggctacaactgggcctacaacaccatgctgaccaaaacctggcgctccagcgcc
accggcgacgagaagttcgcagaccggctgctgaaagacttcacagacttctgctggaac
aaggacagccggctcgtggcgttctggaccgactgcctggacaagatgcacgccagtgcc
ccgtga
DBGET
integrated database retrieval system
