Agelaius tricolor (tricolored blackbird): 139598823
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Entry
139598823 CDS
T10815
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03082
ATP-dependent chromatin remodeling
atrc03250
Viral life cycle - HIV-1
Brite
Protein phosphatases and associated proteins [BR:
atrc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139598823 (SMARCB1)
Transcription machinery [BR:
atrc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
139598823 (SMARCB1)
SWI/SNF complex
139598823 (SMARCB1)
Chromosome and associated proteins [BR:
atrc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
139598823 (SMARCB1)
PBAF complex
139598823 (SMARCB1)
SWI/SNF complex
139598823 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139598823
NCBI-ProteinID:
XP_071301753
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEEDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHENQRSHSPRRYHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTY
LREQKAKRNNQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHEN
ASQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIAS
AIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCS
ELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDA
EMEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcgctgagcaagaccttcgggcagaagcccgtcaagttccagctggag
gaggacggcgagttctacatgatcggctccgaggtggggaactacttgcgcatgtttcgg
ggctccctgtacaagaggtacccctcgctctggaggcgcctggccactgtggaagaaagg
aagaagattgtggcctcttcacatgaaaaccagcggtctcacagtccccgaagatatcat
ggctacacaacattagccactagcgtgacgctgctaaaggcctctgaagtggaagagatc
ttggatggcaatgatgagaagtacaaggcagtgtctatcagcacagaacctcctacctac
ctcagagaacagaaggcaaagaggaacaaccagtgggtgccaaccctgcccaacagctct
catcacctggatgctgtgccgtgctcaacaaccatcaacaggaaccgcatgggcagggat
aagaagagaacattccctctgtgctttgatgaccatgacccagcagtgatccatgagaat
gcatcccagccagaggttctggttccaatcaggctcgatatggaaattgatgggcagaaa
ctccgagatgcatttacgtggaacatgaatgaaaaactgatgaccccagaaatgttctcg
gagattctttgtgatgacctggatttgaatcctctgacctttgtccctgctattgcatct
gccatccgacagcagatcgagtcctacccgactgacagcatcctggaggatcagtcagac
caacgagttattattaagctgaacatccatgtaggaaacatctccctcgtagaccagttt
gagtgggacatgtcagagaaggagaactcaccagagaagtttgccttgaagctgtgctca
gagcttggcctgggcggggagtttgtcacaactattgcctacagcatccggggacagctg
agctggcaccagaagacctatgccttcagtgagaaccctctgcccactgtggagatcgca
attcgcaacacgggcgacgctgaccagtggtgccctctcctggaaaccctcacagacgct
gagatggagaagaagatcagagaccaggacagaaacacaaggcgcatgagacgtttggcc
aatactgctccagcctggtaa
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