Agelaius tricolor (tricolored blackbird): 139598896
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Entry
139598896 CDS
T10815
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03030
DNA replication
atrc03410
Base excision repair
atrc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
139598896 (POLE)
03410 Base excision repair
139598896 (POLE)
03420 Nucleotide excision repair
139598896 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atrc03032
]
139598896 (POLE)
03400 DNA repair and recombination proteins [BR:
atrc03400
]
139598896 (POLE)
Enzymes [BR:
atrc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
139598896 (POLE)
DNA replication proteins [BR:
atrc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
139598896 (POLE)
DNA repair and recombination proteins [BR:
atrc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
139598896 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
139598896
NCBI-ProteinID:
XP_071301933
LinkDB
All DBs
Position
Unknown
AA seq
2297 aa
AA seq
DB search
MGLRDGAETEPARRGRRPGGPRDLADGAGSGRDDASALSALKRLERAQRTDRLDALFGFE
RPAEPGERTGWLINMHPTEVLDEDRQSVSAVDYYFIQEDGSRFKVALPYKPYFYIATQKG
CEREVSSFLSKKFQGKIAKLETVPKEDLDLPNHLVGLKRNYIKLSFNTVEDLLKVRKEIS
PAVRKNREQDQASDVYTTMLSSALSGGSLSTDDEGASKKISNQMDNIVDMREYDVPYHVR
LSIDLKIHVAHWYNVRYRGNTYPPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDADTD
QIMMISYMIDGQGYLITNREIVSENIEDFEFTPKPEYEGPFCVFNEPDEAHLIRRWFEHV
QETKPTIIVTYNGDFFDWPFVEARAAAHGINMYQEIGFQKDSQGEYKASQCIHMDCLRWV
KRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMAMEEPQTLATYSVSDAVATYYMYM
KYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTEDG
HVLDSETYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLMQHVEKTLQHAIEEEEGLPLD
QVTNFQEVCDEIKAKLNSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATC
AACDFNKPGANCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKFPPLFPDGPPRAFHELS
QEEQAKYEKKRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGL
HKVWKKKLSAAVETGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEM
AGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNIKKPKVTIS
YPGAMLNILVKEGFTNDQYQELQDPASLTYITRSENSIFFEVDGPYLAMILPASKEEGKK
LKKRYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGSTLEEVYASVAKVAD
YWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKD
AGLSCRFIISKKPEGSPVTERAIPLAIFQAEPSVRKHYLRKWLKSPSLQDFNIRAILDWD
YYIERLGSTIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFVSKG
KKQILANLPVEGTLSSQVSDIEDFGAVKIPLPLVPIANKRKRIPAAEESQELSQDLELSQ
SWREILGPPPSLGTTKEERLVWLRFHQKKWELQARQRQERRKRRRLEDGEVVAGRGVVRD
ALSKGLSSYLRRTARSILDLPWQVVQIAETSQPGLFRLWAVIGSDLHCIKLSIPRVFYVN
QRVPKPEEGTAYRKVNRILPRSNLVYNLYEYSVPEDMYQEHINEINADLSAPDIEGVYET
QVPLLFRALIHLGCVCMVSRQLVRHLAGREAETFNIEHLEMRSLAQFTYLEPGSIRHIYL
YHSSQGSKAVLGLFIPSQRKAAVFVLDKVRSNQMPNLSTLFSVERAALLEKVGKELLPPD
KHTFEVRAETDPKAIYRGVQRLLSGYKDERRGPTLVAVQSNWDLKQLASGIPIMEEFPLV
PIRLVDDISYSVLDWQRHAARRMIRHYLNLDTCLSQAFEMSRYYHIPIGNLPDDISTFGS
DLFFSRHLHRHNHLLWLSPTARPDLGGKEADDNRLVMEFDERASVEINHPGCYSTVCLEL
DIQSLAVNTVLQSHHVNDMEGGSSMSISFDVIQQASLEDMVTGNQAANIPASYDETALCS
NTFRILKSMVVSWVKEITQYHNAYADNQVIHFYRWLRSPSSLLYDPALHRTLHNMMKKLF
LQLVAEFKRLGSSVVYANFNRIILCTKKRHIEDAISYMEYIINSIHSKEIFHSLTISFSR
CWEFLLWMDPANYGGIKGKVDSRIHYGEKDTRKTLEEEEESEEEEEEEEVAREEEEEKGE
PDVEELLENNWNIAQFLPQAGSCQSYFLMIISAYIVAVYHSMKEELRRNTPGSTPVKRRS
TSQVSQEALGELRAMPGMITFSQDYVANELTQSFFTITQKIQKKMAGSQNATEPSDMFPV
LPGSYLPLNNPALEFIKYVCKVLSLDANITNQVNKLRRDLLRLIEVGEFSEAAQFQDPCR
SYMLPEVICRNCNFCRDLDLCKDPALSQDRSVLPGWLCPSCHVQYDTDAIEMALVEALQK
KLMAFVLQDLVCRKCHGVKETHMPVYCSCAGDFALTISSQVFMDHVSVFQNIARHYGMAY
LLETIEWLLHTNLQLQQ
NT seq
6894 nt
NT seq
+upstream
nt +downstream
nt
atggggctgcgggacggcgccgagactgagccggcgcggcgggggcggcggccgggcggg
ccccgggacctggcggacggcgccgggtccggccgtgacgatgcttccgcgctgtcggca
ctcaagcgcctggagcgggcacagcgcacggaccggctggacgcgctgttcggcttcgag
cggcccgcagagcccggtgagcggacaggatggctcatcaacatgcacccgacggaggtg
ctggatgaggaccggcagtcagtgagcgcagtggactactacttcatccaggaggatggg
agccgcttcaaggtggccctaccctacaagccctacttctacattgctacccagaagggc
tgtgagcgggaagtgtcctccttcctctccaagaagttccaagggaagattgcaaagctg
gagactgtccccaaagaggacttggacttgccaaaccacttggtaggcctgaagaggaac
tacatcaaactgtccttcaacacggtggaggacttgttgaaggtgcggaaggaaatctct
cctgccgtgaggaaaaacagggagcaggaccaggcgagtgatgtctacacgaccatgctg
tcgagtgcactgagtgggggcagtctaagcacagatgacgaaggagcctcaaaaaaaatt
tccaaccagatggacaacatcgtggatatgcgggagtatgatgtgccttaccacgttcgc
ctttccattgatctgaagatccatgtggctcactggtacaacgtgcgatatcggggcaac
acctacccacccgaaatcacccgccgagatgaccttgtggagaggccggatcctgttgtt
cttgcctttgatattgaaacaaccaaactccctttgaagtttcctgatgcagacacagac
cagatcatgatgatctcctacatgattgatgggcagggctacctgatcacaaacagggag
attgtctcggagaacattgaagactttgagtttactcccaagccagagtatgagggtcca
ttttgtgtctttaacgaaccagatgaggctcatttaatccggagatggtttgaacacgtc
caggagaccaaacccaccatcattgtcacatacaacggagacttctttgactggcccttt
gtggaagcaagagcagcagctcatggaattaatatgtatcaggaaattgggtttcagaag
gacagccagggagagtacaaagcatcccagtgcatccacatggactgtctgaggtgggtg
aagagagacagttacctccccgtgggaagtcacaacctgaaagcagcagctaaagcaaaa
ctgggttacgatccagtggagctggaccctgaggagatgtgccggatggccatggaggag
cctcagaccctggccacctactcagtgtctgatgccgttgctacttactacatgtatatg
aagtacgtgcatcccttcatttttgccttgtgtaccatcattcccatggagcctgatgag
gtgttaagaaaaggatctgggacactatgcgaggcactgctgatggttcaggcatatcat
gccaacatcatcttccccaacaagcaagagcaggaattcaacaagcttacagaagatgga
catgtgttggactcagagacctatgtgggaggccatgtggaagcactggaatctggggtc
ttccgcagtgacattccctgccgcttcaaaatgaatcctgctgccttcgacttcctgatg
cagcatgtggagaagaccttgcagcacgccattgaggaagaggagggtcttcctttggat
caggtcactaacttccaggaggtttgtgatgaaatcaaggccaagctgaattccctgaag
gatgttcccaacagaattgagtgtcctcttatctatcatctggatgtgggggccatgtac
cccaacatcattctgaccaacaggttgcagccctctgccatggtggatgaggccacatgt
gctgcctgtgacttcaacaagccaggtgccaactgtcagcgccggatgacgtggcaatgg
agaggagagttcatgcctgccagccgcagtgagtaccaccgcatccagcagcagctggag
tcggagaagttccctcccttgttccctgatggaccaccccgtgccttccatgagctttcc
caggaagaacaagccaaatatgagaaaaagcgcctagcagattactgccgcaaggcgtac
aagaagatccatgtcaccaaggtggaggagcgagtcaccaccatctgccaacgagaaaac
tctttctacgtggacacggtgcgagcattccgggaccgccgatatgagttcaaggggctg
cacaaggtgtggaagaagaagctgtctgcagcagtggagaccggagatgcctctgaagtg
aaacgctgcaagaacatggagattctctatgactcccttcagctggcccacaagtgcatc
ctcaactccttctatggatatgtcatgcggaaaggagctcgctggtactccatggaaatg
gctggcattgtctgcttcacaggggcaaatatcatcacccaggccagagagctgatcgag
cagattgggagacctctagaactggataccgatgggatttggtgtgtccttcccaacagt
ttcccagagaactttgtcatcaagtcaaccaatatcaagaagccaaaagtaaccatctct
tacccaggtgccatgctgaacatcctggtgaaagaaggcttcacaaatgaccagtaccag
gagctgcaggatccagcctcactcacctacatcacgcgctcagagaacagcatctttttt
gaagtggatggtccatacctggctatgatccttccagcctccaaagaggagggcaagaag
ctgaagaaaaggtatgccgtgttcaacgaggatgggtccctggctgagctgaaggggttt
gaggtgaaacgccggggagaactgcagctggtgaagatattccagtcatctgtgttcgaa
gcctttctgaaagggagcaccctggaggaggtctatgcttccgtggccaaggtggccgat
tactggctggatgtgctttacagcaaggctgccaacatgcctgattcagagctgtttgag
ctcatctcagagaaccggtccatgtcacgcaaactggaggactacggggagcagaagtcc
acctccatcagcactgccaagcgcctggcagagtttttgggggaccagatggtgaaggat
gcaggactgagctgccgtttcatcatttccaagaaaccagaagggtctcctgtcaccgag
agggccatcccccttgccatcttccaagctgagcccagtgtgcgcaagcactacctccgg
aaatggctgaagagcccctcgctgcaggacttcaacatccgtgcgatcctggactgggac
tactacattgagaggctgggcagcaccatccagaaaatcatcaccattcctgcagccctg
cagcaggtaaagaacccagtgccacgggtccgacacccagactggcttcacaagaagctt
ctggagaagaatgatgtgtacaaacagaaaaaaatcaatgagctttttgtttcaaaaggc
aagaaacagattcttgccaacctgcctgtggaggggacactcagctcacaggtcagtgat
atagaggactttggggctgtcaagatccctctgccactggttcccattgcaaataagcgg
aagcgcatccctgcagcagaggaaagccaggagctgtcccaggacctggagctgtcccag
tcctggcgagagatcctgggcccacctccgtcccttggcaccaccaaggaggagcgtctg
gtctggctgcgcttccaccagaagaagtgggagctgcaggctcggcagcggcaggagcgg
aggaagaggcggcggctggaggatggtgaggtggtggcgggcagaggagtggtccgcgat
gccctctccaaaggactgagcagttacctgcgccggacagcgcgcagcatcctggacttg
ccctggcaggtcgtgcagatcgctgagaccagccagcctgggctgttccggctatgggcg
gtgatagggagcgacctgcactgcatcaagctgagcatcccccgtgtcttctatgtcaac
cagcgtgtcccaaagcctgaggagggaacagcctacaggaaggtaaacagaatcctgccc
cgctccaacttagtttacaacttgtacgaatactctgttcctgaagacatgtaccaagag
cacatcaacgaaatcaatgcagacctctctgctccggacatcgagggagtgtatgagaca
caggtgccactgctattccgtgccctgatccacctgggctgtgtgtgcatggtcagcagg
cagctcgtccggcacctggcagggcgagaggctgaaaccttcaacattgagcacctggag
atgcgctcactggctcagttcacttacctggagccaggaagcattcgccacatctacctg
taccacagctcccagggcagcaaggcagtcctgggcctcttcatcccctcccaacgcaag
gctgctgtctttgtgctggacaaggtacgcagcaaccagatgccaaacctctccaccttg
ttctcagtggagcgcgcagctctgctggaaaaggtgggcaaggagctgttgcccccagac
aaacacacctttgaggtgcgtgctgagaccgaccccaaggccatctacagaggtgtccag
cggctgctctcgggctacaaggatgagcgccggggccccacattggtggctgtgcagtcc
aactgggacctgaagcagctggcaagtggaatccccatcatggaggagttccccttggtc
cccatccggctggtggatgacatcagctactctgtcctggactggcagcgccatgccgcc
cgccgcatgattcgccactacctcaacctggacacctgcctttcccaggcttttgagatg
agcaggtactaccacatccccattggaaacctccctgatgacatctccaccttcggctcc
gacttgttcttctcacgccaccttcatcgtcacaaccacctgttgtggctgtcccccaca
gcccgccctgacctgggggggaaggaggccgatgacaaccgcctggtcatggagtttgat
gagagagcctcagttgagatcaaccatcctggctgctactccacagtgtgtctggagctg
gacatccagagcctggctgtgaataccgtgttgcagtctcaccacgtgaatgacatggaa
ggaggctccagcatgagcattagcttcgatgtgattcagcaggcatccctggaggacatg
gtcacagggaaccaagctgccaacatcccagccagctatgatgaaactgccctctgctcc
aacactttcaggattttgaagagcatggtggtgagctgggtgaaggagattacgcagtac
cacaatgcctatgcagacaaccaggtcattcacttttaccgctggctccgctctccttcc
tccctgctttatgacccagcactgcaccgcacactccacaacatgatgaagaagcttttc
ctacagctggtggctgagttcaagcgcctgggctcctctgtggtctacgccaacttcaac
cgcatcatcctctgcaccaagaagcggcacattgaggatgccatcagctatatggagtat
atcatcaacagcatccactccaaggagatcttccactctctgaccatctcgttctcccgg
tgctgggagttcctgctctggatggacccagcaaattatggaggtatcaagggaaaagtg
gattctcgcatccactatggggagaaggacaccaggaagacattggaggaggaggaggag
agtgaggaagaggaggaggaggaggaggtggcaagggaagaagaggaggagaaaggggag
ccagatgtggaggagctgctggagaataactggaacattgcgcagttcctgccccaggcc
ggctcctgccagagctacttcttgatgatcatatcagcctacatcgtggctgtgtaccac
agcatgaaggaagaactgcggcgtaacactcctgggagcacccccgtcaagaggaggagc
accagccaggtgtcccaggaggctctgggggagctgagggccatgcctggcatgataacc
ttttcacaagattacgtggccaatgagctcacccaaagcttcttcaccattacccagaag
atccagaagaagatggctggttcccaaaatgccacagagccctcagatatgttcccagtc
ctgcctggctcctacctgccactcaacaacccagctctagagttcatcaaatatgtctgc
aaggtcctctccctggatgccaacataaccaaccaggtgaacaaactacgccgggacctg
ctgcgcctcatcgaggtgggcgagttctcagaagcagcccagtttcaggacccttgccgc
tcctatatgcttcctgaagtcatctgcaggaactgcaacttctgcagggatttggacctg
tgcaaggaccctgccctttcccaggacaggtcggtgctgcccggctggctctgccccagc
tgccatgtgcagtatgatactgatgccattgagatggcgctggtggaagccctgcagaag
aaactgatggcctttgtgctgcaggacctggtgtgcagaaagtgtcacggtgtgaaggag
acacacatgcctgtgtactgcagctgtgctggagacttcgccctcaccatctcctcccag
gtcttcatggaccatgtcagtgtcttccagaacattgcccgacattatggcatggcctac
ttgctggaaaccattgagtggctgctgcacaccaacctccagctccagcagtga
DBGET
integrated database retrieval system
