Agelaius tricolor (tricolored blackbird): 139598918
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Entry
139598918 CDS
T10815
Name
(RefSeq) zinc finger RNA-binding protein-like isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atrc03041
]
139598918
Spliceosome [BR:
atrc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
139598918
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
139598918
NCBI-ProteinID:
XP_071301953
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHSGAAAQYSQQPASGVAYSHPTTVASYT
VHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYGGYPTAHTATDYGYTQRQQ
EAPPPPPPVTTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAAVAAAAQPQPSVAESY
YQTAPKAGYSQGATQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSSTVQPVAAAATVVP
SYTQSATYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQKQAAAAAAAAATAAWTGPT
FTKKIPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKASQN
TNNNSTARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPNVV
TQAATSTSTSASKPTASASNIATSSSTVNSSVTSSTVKILTPTANAPLNTVSNNKTSSTA
ANIAVKKISPPKINFVGKYRSGNKLQTTGSKLEEMKSAESVKATTAATIQTQEVKPDTAA
EPVTSTTLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRRH
RLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYEEDM
YWRRMEEEQHHWDDRRRIPDGGYPHGPPGSLGLLGVRPGMPPQPQGPAPLRRPDSSDDRY
VMTKHAAIYPTEEELQAVQKIVSITERALKLVSDNMTDHEKSKSKEGDDKKDSSKDRALK
GVLRVGVLAKGLLLRGDRNVNLVLLCAEKPSKMLLGFIAESLPKQLAVISPEKYDIKCAV
PEAAIILNSCVEPKMQVTITLTSPVIREENMRDRDVTSGMVKDPPDVLDRQKCLDALAAL
RHAKWFQARANGLQSCVVIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSATGPQSPGD
ALRRVFECISSGIILKGGPGLLDPCEKDPFDTLAVMTDQQREDITSSAQFALRLLAFRQI
HKVLGMDPLPQMNQRFSIHNNRKRRRDSDGVDGFEAEGKKDKKDYDNF
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgattcctatatgcccggtagtttctttcacctatgtgcccagccgcctgggagaagat
gccaaaatggccaccggcaactactttggattcacccatagcggggctgctgcccagtat
agccagcagccagcttcaggcgtagcttattcccatccaactacagttgccagctacact
gtccaccaagcaccagttgctgcgcacactgtcactgcagcctatgctccagcagcagct
acagttgcagtagccaggcctgctccagtagctgttgcagctgctgcaacagctgctgct
tatggaggctatcctacagcgcacacagctacagattatggttatacacagaggcaacaa
gaagctccaccaccaccacctcctgtcactacgcagaactaccaggattcctattcttat
gttcgatctactgccccagctgtagcttatgacagcaaacaatattatcaacaaccaaca
gcaactgctgcggctgtggctgctgctgcacagcctcagccttcagtggctgagtcatac
taccagacagctccaaaagcaggatatagccaaggggcaactcagtatacccaagcccag
caaacacgacaagtgacagctataaaacctgcaaccccaagtccagcaacaactacattt
tctatatatccagtatcttctactgtgcagccagtagcagctgcagctactgttgttcca
tcctatactcaaagtgcaacatacagtacaacagcggttacttactctggtacctcttat
tctggctatgaagctgcagtatattcagctgcatcatcgtattaccagcagcagcagcag
cagaaacaggcagcggcagcagctgctgctgctgcaacagctgcttggacagggcccacc
tttactaaaaagataccattccaaaataagcaactgaaaccaaagcaacctcccaaacca
ccccagatccactactgtgatgtttgcaagatcagctgtgctggaccacagacttataaa
gaacacttagaaggccagaaacacaaaaagaaagaagcagcattaaaagcttcccagaac
accaataacaacagtactgctcgtggaactcagaatcagttgcgctgtgagctttgtgat
gtgtcttgtacaggagcagatgcttacgctgcccatatccgtggagccaaacatcagaaa
gtagtaaagttgcatacaaaacttggcaaacctattccatcaactgaaccaaatgtggtt
acccaagctgcaacttcaacatccacatctgcttctaaaccaactgcttctgcttcaaat
atagcaactagcagcagtactgtgaactcctctgtcacatcctctacagtgaaaattctt
actcccacggcaaacgcaccacttaacactgtgtccaacaacaaaacatcttcaaccgct
gctaatatagctgtaaagaaaatatctccaccaaaaataaactttgttggcaagtacaga
agtggtaataaacttcagacaacaggaagtaaactggaagaaatgaaatcagctgaaagt
gttaaagcaacaactgctgctacaatacaaacacaggaagtaaaaccagacacagcagct
gaaccagtgacatctacgactcttgctgccttgcaaagtgatgtccagccagtgggccat
gactatgtggaggaggtaagaaatgatgaaggaaaggtgatccgctttcactgtaaactt
tgtgaatgcagttttaatgatcctaatgccaaagagatgcacttaaaagggaggcggcac
agacttcagtataagaaaaaagtaaacccagatttacaagtagaagtaaagcccagtatt
cgagcaagaaaaattcaagaagagaagatgaggaaacagatgcagaaagaagaatactgg
agaaggcgagaagaggaagaacgctggaggatggaaatgaggcgatatgaagaggacatg
tactggaggagaatggaggaagagcagcatcactgggatgaccgtcgcagaataccagat
ggaggatatcctcatggtcctccaggatctctaggcctgctgggagttagaccaggaatg
cctcctcagccccaaggaccagcccctctacgccgccctgattcctctgatgaccgctat
gtgatgaccaaacatgcagctatatatccaacagaggaggaacttcaagcagtccaaaaa
attgtctctattactgagcgtgctttgaaacttgtttctgacaatatgactgaccatgaa
aaaagcaagagcaaagagggagatgacaaaaaagacagcagtaaagacagagctttgaaa
ggagttttacgggtgggcgttttggctaaaggtttgttactccgtggagaccgaaatgtc
aatcttgttttgttatgtgctgagaagccttcaaagatgttacttggttttattgctgaa
agtcttcccaaacaacttgcagtaataagtcccgagaaatatgatatcaagtgtgcagtc
ccagaagcagcaataattttaaattcatgtgtggaacccaaaatgcaagttactatcaca
ctgacatctccagtcattcgggaggagaacatgagggatagagatgtaacctcgggtatg
gtgaaagacccaccggacgtcttggacaggcaaaaatgccttgacgctctggctgctcta
cgccacgctaagtggttccaggctagagctaatggtctgcagtcctgtgtggttatcata
cgtattcttcgtgacctctgtcagcgggttccaacttggtctgattttccaagctgggct
atggagttacttgtggaaaaagcaattagcagtgctactggaccacagagtcctggggat
gcactaagaagagtttttgagtgtatatcttcaggaataatccttaaaggtggtcctggc
cttctggacccttgtgagaaagatccttttgatacacttgctgtaatgacagatcagcaa
cgagaggatattacttcaagtgcacagtttgcgctgagactccttgcattccgtcaaata
cacaaagttttaggaatggatccattaccacagatgaatcaacgcttcagtattcataat
aatcgtaaaagaagaagggacagtgatggggttgatggatttgaagcagagggaaaaaaa
gacaaaaaagattatgataacttttaa
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integrated database retrieval system
