Agelaius tricolor (tricolored blackbird): 139599034
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Entry
139599034 CDS
T10815
Symbol
CFAP43
Name
(RefSeq) cilia- and flagella-associated protein 43 isoform X1
KO
K24223
cilia- and flagella-associated protein 43
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
atrc03037
]
139599034 (CFAP43)
Cilium and associated proteins [BR:
atrc03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
139599034 (CFAP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_MABP1-WDR62_1st
Beta-prop_EML
WD40_CDC20-Fz
CFAP43_N
WD40_Prp19
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40
Beta-prop_HPS5
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
EIF3I
Leuk-A4-hydro_C
Motif
Other DBs
NCBI-GeneID:
139599034
NCBI-ProteinID:
XP_071302063
LinkDB
All DBs
Position
Unknown
AA seq
1658 aa
AA seq
DB search
MAAGPGSAGPGAEGAALEVSWVQGFSNKSLAFINNQTVCYPCGNYILFLDIETKKTRAVQ
CQNGQVGAFAASASSQVVAFSDRQLNPLIHIYTFPELRKLTELKGDAQLDYTLLALSFKG
PYLASYSSIPEFVLSVWNWQENILLCSESQPGLTGTSLSFNPMNWQQLCFVAETSVTIWC
VERSKDEHLLTRHPVELPDEQGVMSPHEDLFFPPSCKDDPYYGPDLPISAIAGLEGDEAE
TFVPRNCIKTSVHPTAHCWTAASEIYMGCKEGYVLAIDAEQYSVSVLQQKSPPEFMQKIA
DVVSYARSEVQKKKGRKPSNLQKPVLLAMAFCNEGLYAAGHEGILIFYHIKDLQYEIKIC
ADISQPISSLMFSPDYTSLLLVTDQGTVYSYRPAHSGEAVKLLDAPSSSFLAADFLTPGN
NYCVSVTISGEVQVWSLEDGTFLSKLNLGTEATSMACSPSSKSVAVGTQRGQIYFLDVTK
AEAPRVVHRTFLSKLPVLSLHYDQVGQFLIARATEGHIFILDARPSKLFQVLGYTVLEDE
VLHLSVTPDLKHDLVKVMVLLNVAEVQQARLEIFHLSSEMITDHDKYVNEQGMFNASDLK
KKQYDLDYPLSSAVRLKNSIVYGYCSCAPLICKYHLSEGATFGGPTIFSSEQTIPSKQFG
SGLLCLSPNSQWLAAAAKDGVLFIYNTSTLDVAQNHCHSYQGGGIRSVVFSLDGNFILVN
GENDCALVCLKWKEIKKTEVEKAALYWQSLRDILNKSTSVENSVLKSMAEWNFDPESTSK
SLSVTEEDGDVTDADGMTWIGQKIQKVMREETLRFANQKEELQMGIRKLRETIQKMMHEN
EQVPDIEKLEHWEFNLDLEEQEQVQAEAEEDVARARREIEMEILSYCYLQDLIKFECWDN
MCVKERAVKCFHTDCEVRNFPLKERSKEELETLNEVLQLRRTADLQAQKKNLDSETALSE
EEGERAAGEVANNGAPLCLNGSLSSQYGGNTSILYHQCDLHTKEQKLHQTILLKDVIYKV
KAAFNEEFNIVLQKKEQEIARVKERNLKIQEILQQLDLQVELWEPGLTDDEMPERVLTVQ
DSEIKAEKYMTQEEKEQAEMLAKLERERRLAATDDERLRALDDMMGGVLELRREDILKMD
IPPPDFLSRPEDLWTEEEKKVFEEYEKKLNELNEEKEDYRQFLRNEWNKIEASIKETTQN
FDEIVRKLSEKKLKSQMVIYQEELKIVNLIYTLLLDEELDTREAGLHKFLMKKKKEKVKG
ARKILTAKHAVEACTGPYKEALHEEKNLEHAFMKQFAHTPGNLFEELLQLYKLRPETPDT
EILLDTANPYVKGSPEDYQGAVSLLMKAMDELDSPEHMPGGLDQSMWEHFCLARRNKMES
EELVKWKAQALAEMQASHHRRMEENDKIKSELEKTFQELTWLKEEKMKLQQNLIVQFLLK
QGQVELDSTQIPEYSDAVLIDRSVVEELNCTVAAQGEKKITAMVEFKDFSKGIIQLEWEH
KKMKMQIQDLKEKARDIVILPISKDCQLFLTVHNYDTHIAQHLAGMEQTLGVMDKLHKKN
VKNHQKKVRELKKCIRLKEQENYELSLQLKEMLVSVSERMHIFEAADTRDISEKITRQRY
REIVKQKYLRNLIREQEKQLAVLQSEIESWNPRTLHII
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggggccgggctcggcgggacccggcgcggagggagccgccctggaagtgagt
tgggttcaggggttctcaaacaagagcttggcctttatcaacaatcaaactgtctgctac
ccttgtggtaattacatcctcttcctggacatcgaaacaaagaagacaagagcagtgcag
tgccagaatggccaggtgggagcctttgcagcaagtgccagcagccaagtggtggctttt
tctgaccggcagctgaatcccctcatacacatctacacttttccagaactgagaaaactg
acagaattaaaaggtgatgctcagctggactataccttacttgcattaagttttaaaggc
ccatatctggccagttactcttcaatcccagagtttgttctttcagtatggaactggcaa
gaaaatatcctcctgtgcagtgagtctcagccagggctaacaggaacctctctgagtttt
aaccccatgaattggcagcagctgtgttttgttgctgagacctctgttaccatctggtgt
gttgaaaggagcaaggacgagcatctcctcacacgacaccctgtggaactccctgatgaa
cagggggtcatgagtcctcatgaggatttgtttttcccaccttcttgtaaagatgatcca
tactatggccctgatttgccaatttcagccattgctggactggaaggagatgaagcagaa
acatttgtgcctagaaattgtattaaaacttcagtgcatcctactgcccactgctggact
gcagcctcagaaatatacatgggctgtaaagaaggatatgttttggcaattgatgctgag
caatacagtgtttctgttcttcaacaaaaatctccacctgagttcatgcagaaaatagca
gatgtggtgtcctatgctcgtagtgaagtgcagaaaaagaaaggtcgcaaaccaagcaat
ctgcaaaaaccagttttacttgccatggcattttgtaacgagggactgtatgcagctgga
catgagggcattttaatcttttatcacatcaaagatctgcagtatgagataaaaatctgt
gctgatatctcacagcccatatccagcctcatgttttctcctgattacaccagtctgctg
cttgtcactgaccaggggacagtctatagttacagacctgcccatagtggagaagctgtc
aaactcttggacgcacccagcagttcttttctggcagctgattttcttactccagggaac
aactactgtgtgtctgtaacaatttcaggtgaagtacaagtttggtccttggaggatgga
actttcctcagcaagctaaaccttggtactgaggcaacttctatggcttgcagtccctcc
tccaagagtgttgctgtagggacccaaagaggtcaaatctatttccttgatgtaaccaaa
gctgaagctccacgggttgttcatagaacttttctttccaaacttccagtgctgtctttg
cattatgatcaggttggccagttcctcattgcaagagctacagaaggacacatctttatt
ctagatgctcgtccatcaaaattattccaggttctgggatatacagtactggaagatgaa
gtgctccatctttctgtaactcctgacttaaagcatgacttggttaaagtgatggtactt
cttaatgtagcagaggtccaacaagcaagactggaaatttttcatctgtcttcagaaatg
ataacagatcatgataagtatgtgaatgaacaaggaatgtttaatgctagtgacctgaaa
aagaagcaatatgatctggattaccctttgagctcagcagtcagactgaagaatagcatt
gtgtatggctactgctcctgtgcacctctcatctgtaaataccacctctctgaaggggct
acatttggaggtccaacaatattttcatcagagcagacgattcctagcaaacagtttgga
tcaggtttgctctgtttatcacccaacagccagtggctggcagcagcagccaaggatggt
gttttgtttatctacaatacttctactctggatgttgctcaaaaccattgtcactcatat
caaggagggggaatcagatccgtggtattctccctggatggcaatttcatcctagttaac
ggtgaaaatgattgtgccctggtgtgtctgaagtggaaggagataaagaaaactgaagtt
gaaaaagctgctctttactggcaatctctacgtgatatactgaacaagtctacttcagtt
gaaaactctgttttaaaatctatggcagaatggaattttgacccagaatccacatcaaaa
tcactttcagtgacagaagaagatggagacgtcacagatgctgatggcatgacatggata
ggccagaaaatacagaaggttatgagagaagagactctgaggtttgctaaccagaaggaa
gagctgcaaatgggaattagaaagctgcgtgaaactattcagaaaatgatgcatgaaaat
gagcaggtgccagacattgagaaacttgagcactgggagttcaacctggatttagaagaa
caggaacaagtgcaagcagaggctgaagaagatgtggccagggcgaggagggagattgag
atggagattttatcctactgctatttgcaggatttaatcaaatttgagtgctgggataac
atgtgtgtaaaagaacgtgcagttaagtgcttccatacggattgtgaagtgaggaatttt
ccactgaaggaacgtagtaaagaagagctggaaactttgaatgaagttctccagttaagg
cggacagctgatcttcaggctcagaagaaaaatcttgactctgagactgctttatctgag
gaagaaggagagagggcagcaggagaagtggctaataatggtgcacctctctgcctcaat
ggaagtctgagctctcagtatggtgggaacacatctatcctataccaccagtgtgacctg
cacacaaaggagcagaaactccatcagacaatattattgaaggatgtcatttacaaagtg
aaggctgcttttaatgaggaatttaacatagttttacaaaaaaaggagcaggagatagca
cgagtgaaagaaagaaacctgaagatccaagaaatcttgcagcagcttgaccttcaagtg
gaattgtgggagccaggccttacagatgatgagatgccagagcgagtgctcaccgttcag
gattcagagattaaagctgagaaatacatgactcaggaggagaaagagcaggcagaaatg
ctggctaagcttgaaagggaaagacgccttgctgctacagatgatgaaagactgcgtgct
cttgatgacatgatgggtggagtgctggaactcaggagggaagacattttgaaaatggat
attcctccacctgattttttatccagacctgaggatctttggactgaagaagaaaaaaaa
gtatttgaagaatatgaaaaaaaactcaatgaattgaatgaagaaaaagaagattataga
cagtttctgagaaatgaatggaacaaaattgaagcttccatcaaggaaacaacacaaaat
tttgatgagattgtccgcaagctctctgaaaagaaactgaaatcacagatggtcatctac
caggaagaactcaaaatagtcaatctcatttacactttactgttggatgaagagttggac
accagagaagctggacttcataaattccttatgaaaaagaagaaagaaaaagtcaagggt
gccagaaaaatcctgactgcaaaacatgctgttgaggcttgcacaggcccctataaagag
gcattacatgaagagaagaacctggaacatgcttttatgaagcagtttgctcatacacct
ggcaatctctttgaggagcttttacaactttacaaacttcgaccagagaccccagataca
gaaatcctccttgacacagctaacccctatgtgaagggatcacctgaggattaccaaggt
gcagtttcccttttaatgaaagccatggatgaactggatagtcctgagcacatgcctggt
ggcttagaccagtctatgtgggaacatttttgtctagctagaagaaataaaatggagagc
gaggagctggtgaaatggaaggcccaagcactggcagagatgcaggccagtcaccataga
agaatggaggaaaatgataagattaagtcagaattggagaaaactttccaagaactcact
tggctgaaggaggagaagatgaagcttcagcagaatttgattgtccagtttttgctaaaa
caaggacaggtggaattggatagtactcagatcccagagtacagtgatgctgttctcatt
gataggagtgttgttgaggaactgaattgcactgttgcggctcaaggagaaaaaaaaatt
actgccatggtagaatttaaggacttctctaaagggataatacagctggaatgggaacac
aagaaaatgaaaatgcagatacaagatctgaaagagaaggctcgggatattgtaatccta
cctatttcaaaagattgccagctattcctaactgtgcataactacgacacccacattgct
cagcacctggcagggatggagcagaccctcggtgtcatggataagttgcacaagaagaat
gtgaaaaaccatcagaaaaaagtcagagagctgaagaagtgcatccgtctgaaggagcag
gagaactacgagctgagcctgcagctgaaggaaatgcttgtctctgtgtcagaaaggatg
cacatcttcgaggcagctgacacacgggatatttctgaaaagatcacaaggcagcgttac
cgagagattgtgaagcagaaatatctacggaaccttataagggaacaggaaaaacagctt
gcagttcttcagtcagaaattgaaagttggaatccaagaacactccatattatttaa
DBGET
integrated database retrieval system
