Agelaius tricolor (tricolored blackbird): 139599093
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Entry
139599093 CDS
T10815
Symbol
TRUB1
Name
(RefSeq) pseudouridylate synthase TRUB1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atrc03016
]
139599093 (TRUB1)
Enzymes [BR:
atrc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
139599093 (TRUB1)
Transfer RNA biogenesis [BR:
atrc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
139599093 (TRUB1)
Prokaryotic type
139599093 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DMA
Motif
Other DBs
NCBI-GeneID:
139599093
NCBI-ProteinID:
XP_071302197
LinkDB
All DBs
Position
Unknown
AA seq
287 aa
AA seq
DB search
MAGEAGGAALGRAADKLFSLSGLFAVCKPKGPTSAAVLNLLKERLLAEAGVQTKGNKRNQ
VLKIGHGGTLDSAATGVLVVGIGKGTKMLGTMLAGSKKYTAIGMLGKATDTLDATGKVTE
EKPYDQVTKGDLENVLQKFTGDIMQVPPLYSALKKDGERLSTLMKRGEAVEAKPARPVRV
YSLSLQQFQPPLFTLGKDVECGGGFYVRSLVNDIGKELSTCASVQELTRTKQGPFTLEEH
ALREDKWTIDEIAQSLERCTALLLGEPARKKLKTEHPGETAVICEDK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggaggcgggcggcgccgcgctgggccgcgcggccgacaagctcttctcgctc
agcgggctcttcgccgtctgcaagcccaagggacccacctcggccgccgtgctcaacctg
ctcaaggagaggctgctggcagaagctggtgtgcaaacaaaagggaacaaaagaaatcag
gttttgaaaattggacatggaggaactttggacagcgcagccacaggagttctggtcgtt
ggtattggaaaaggaacaaaaatgctggggactatgttggcaggttccaagaagtacact
gccattggaatgctgggcaaggctactgatacattagatgctacaggaaaagtcactgaa
gaaaaaccttatgaccaggtaacaaaaggagatcttgaaaatgttctgcaaaagttcaca
ggggacatcatgcaagttcccccactctattctgctttgaagaaggatggagaaaggctt
tcaactctgatgaagagaggggaagcagtggaagcaaagcctgctcggccagtgagagtg
tacagcctttctctccagcagttccagccaccactgttcacgctgggtaaagatgttgaa
tgtggtggtggcttttatgtcaggagcctggtcaatgacattggcaaagagctctccacc
tgcgcctcggtgcaggagctgacgcgcaccaagcaggggccgttcacgctggaggagcac
gccctgcgcgaggacaagtggacaattgatgaaattgctcagtccttggagcgctgcaca
gccctgctcctgggagagccagctcggaaaaaattgaagacagagcatcctggtgaaact
gctgtgatctgtgaggataagtga
DBGET
integrated database retrieval system
