Agelaius tricolor (tricolored blackbird): 139599294
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Entry
139599294 CDS
T10815
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atrc03036
]
139599294 (MSH4)
Chromosome and associated proteins [BR:
atrc03036
]
Eukaryotic type
Meiosis-specific proteins
Others
139599294 (MSH4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
AAA_28
nSTAND3
ATPase_2
AAA_30
AAA_23
Motif
Other DBs
NCBI-GeneID:
139599294
NCBI-ProteinID:
XP_071302577
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MAGAGGRAAASATSESYTGRGSSTPGVGERTEHTPRYTLGLLQTPHSSESTGGASSGGTR
PGGSSGEGLAARRAAWNSAVKPSVSERGESYFGDKSSCVENANTLNLTSSSSVRGLNSTC
IGKTPLSSGRSGCRSHTPLMGYSVTSSSAVSAHTVASVIVAVVEGRGLARGEVGMASIDL
KNPEMILSQFADNTTYAKVITKLKILTPLEIIMSNTACDAGNTTKLFSLITEHFKNVTFT
TVQRKYFNETKGLEYIEQLCASEFSTIFMEVQSKYYCLAAAAALLKYVEFIQNAVYAPKS
LKVRFQGSEKTAMIDSSSAQNLELVINNRDSRNGHTLLGVLNYTKTPGGSRRLRSNILEP
LVDAETINTRLDCVQELLQDEELFFGLQGVISKFLDTEQLLSVLVQIPKQDTVKTAESKI
TNLIYLKHTLELVEPLKAALRSCNTQLLKAYYNSLEDTRFGIILEKITSVINDDTRYTKG
CLSMRTQKCYAIKPNINEFLDIARRTYTEIVDDIAGMITQLAEKYSLPMKTSFSSARGFF
IQMNADCSTLPNGQLPSEFTKITKMKNTYSFTSADLIKMNERCQESLREIYHMTYLIVCK
LLNEIYEHIHCLYKLSDIVSMLDMLLSFAHACTLSDYVRPEFTDTLAIKQGWHPILEKIA
MEKPVSNNTYLTEGNNFVIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYGSFRIAEQ
IFTRIGMDDDIETNASTFMKEMNEVTYIIQNANDKSLIIIDELGRGTSAEEGIGICYAAC
EYLLNLKAFTLFATHFLELCHIDALYPNVENYHFEVQHVRSSAGSKEKIAYTYTLSKGYT
EEKNYGLKAAEVSSLPSSIILDAKEITSHIAKQILHRQKSTPEMMKQRAAYQLAMRLVQT
ARNSRLDPDSLRVYLKALKKKYEASCPTPRENDEQQ
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcgggcgggcgggccgccgcctcggccacctcggagtcctacacgggccgc
ggctcttccacgccgggtgtgggcgagcggacggagcacacaccccgctacaccctgggg
cttctgcagacgccgcacagctcggagagcaccggaggcgcctccagcggcgggacgcgg
ccgggcggctccagcggggaaggcctcgcagcccgccgggctgcctggaacagcgccgtg
aagccgtcggtgtccgaaaggggagaatcatattttggggacaagagttcttgtgtagaa
aatgctaacacattgaatctcacgagttcttcttctgtgcgaggcctgaatagcacatgt
ataggaaaaacacctctatcttctggtagatctggttgcagaagccataccccacttatg
ggatattcggttacatcctcatctgcagtttctgctcatactgttgcatcagttattgta
gctgtagtagaaggaagaggccttgccagaggtgaagtaggaatggccagtatagattta
aaaaatcctgagatgatattatcacaatttgcagacaatacaacttatgccaaggttatt
actaaactcaagattttaacaccactagaaataataatgtcaaacactgcctgtgatgca
gggaatacaacaaaattgtttagtctgataacggagcatttcaagaatgtgacttttaca
actgttcagagaaaatacttcaatgaaacaaagggtttggagtacatagaacaattgtgt
gcatctgaatttagcaccattttcatggaagtccaatcaaagtattactgtcttgcagct
gcagcagctttgctaaaatatgttgaatttatccaaaacgccgtctatgctcctaaatca
ctaaaggttcgtttccaggggagtgagaaaacagctatgatagattcatcatcagcacaa
aatcttgaactagtgattaataacagagattctcggaatggtcacacacttcttggtgtt
ctaaattacactaaaactcctggtggaagtcggagacttagatccaatatcctggaacct
ctagttgatgctgaaacaattaacacaagactggactgcgttcaggaattactccaggat
gaggagctcttttttggtcttcaaggagttatctcaaaattcctggatacagaacaacta
ctttcagttttggtacagattccaaagcaggatacagttaaaactgctgaatcaaaaata
actaatttaatctacctgaagcataccttagaacttgtggaacctctgaaagctgcttta
agaagctgtaacacacagctgctaaaggcttattataattctcttgaagatacaagattt
ggaattatacttgaaaagattacaagtgtaattaatgatgatacaagatacacaaaagga
tgtctgagtatgaggacccagaagtgctatgctattaagcctaacatcaatgaattcctt
gacatagctcgtagaacatacacagaaattgttgatgacatagcaggtatgataacgcaa
ctggcggaaaagtacagcctgcccatgaaaacaagtttcagctctgctcgtggatttttt
atccagatgaatgctgattgttcaacattacctaatggccagcttccttcagaatttaca
aagatcacgaaaatgaaaaacacatacagcttcacttcagcagatttaataaaaatgaat
gaaagatgtcaggagtccctgagagaaatatatcacatgacctacttaatagtgtgtaaa
ctactgaatgagatctatgaacacattcattgcttatacaagctgtccgacattgtgtct
atgctggatatgctgctttcatttgcccacgcctgcactctttccgattatgttcgtcca
gaatttactgatactttagcaatcaagcaaggatggcatcccattcttgaaaagatagct
atggaaaaacctgtgtctaacaacacgtacctgacagagggcaacaattttgtcattatt
acaggaccaaatatgagtggaaaatcaacatacctgaaacagattgctctctgtcaaatt
atggcacagattggttcttatgtcccagcagagtatggttcttttcgaatcgcagagcag
atttttaccagaataggtatggatgatgatattgaaacaaatgcatcaacattcatgaag
gaaatgaatgaggtaacatacattatacaaaatgctaatgataagtcactcatcattatt
gatgaacttggcagaggtaccagtgctgaagaaggtattggaatttgttatgctgcttgt
gaatatctgttgaacttaaaggcatttacactgtttgctacgcatttcctggaactatgt
catatagacgctttatatcccaatgtggaaaactaccattttgaagtgcagcatgtgaga
agcagtgctggaagtaaggagaaaattgcttacacttacacactttctaaaggatacaca
gaggaaaagaactacggactaaaagctgcagaagtgtcctccctaccatcatccataatt
ttggatgcaaaggaaatcacaagtcacattgcaaaacaaattttgcacagacagaagagc
actcctgagatgatgaaacagagagctgcataccagttagcaatgagattggttcagact
gccagaaattctcgactggaccctgacagtttgcgtgtatatttgaaagccctgaagaaa
aagtatgaagccagttgtcccacacccagagaaaatgatgagcaacagtaa
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