Agelaius tricolor (tricolored blackbird): 139599401
Help
Entry
139599401 CDS
T10815
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139599401 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atrc03021
]
139599401 (TAF4)
03036 Chromosome and associated proteins [BR:
atrc03036
]
139599401 (TAF4)
Transcription machinery [BR:
atrc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
139599401 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
139599401 (TAF4)
Chromosome and associated proteins [BR:
atrc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
139599401 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
139599401
NCBI-ProteinID:
XP_071302775
LinkDB
All DBs
Position
Unknown
AA seq
1103 aa
AA seq
DB search
MAAGSDLLDEVFLNTEVDEKVVSDLVGSLESQLAASGHHHQHHKAQEPLRAAGGLLGNHV
VSSSSSSSSPSPSPGGVVVGGNANAQTESSSGSKMGLSAPEITKAGAGGVQGGVINHNTR
SQTSALDGATTTSTSTTTAAAGGSEVTAAPGTLSQGKSVVISTMATALSTRNGKIGTTTV
QTLNGSNVVMNSHHTGSAAFSGTPVTANPAPAPAVAPLVNNGPGSVGKGNAVNAVLPSAS
NTVIQTSFLNTAVSSASSSSPTVISSQPPASVGTGAPTVTLVRPPIHTAGPTVAAAAAAT
QNGSNTVINSTISVGSFPAVATATVGSGVSLQTSLVNSQSGSSVPAAPATQVIKSESPKT
IVQAVSQQQTLATAGQPSTTGGNMIIGQTMQAGLSNVAPNPGGIPPAAPGTPTGMAKGTA
NTVAQSLPRTPTPTTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQL
LMIPQQALAQMQAQAHAQSQPQNTLTPRPATPTSAPPVQISTVQAPGTPIIARQVTPTTI
IKQVSQAQTTVQPTTTLQRPPVVQPQIVLGGTAQTTTLGTATAVQTGTPQRTVQGTTATS
TAATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQSLLDGKIEPEDFTSRLYR
ELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQATIATIPSVTSVLLSSS
VQRTAGKATATVTSTLQQPVISLTQPTQVGVSKQGQSTPLVIQQSQKAGALIRPPQVTLT
QTPMVALRQPHSRIMLTTPQIQLNQLQTVPVVKPAVLPGNKAIATVSTQVAAAQKNKLKE
PGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETFLFPAPLQRRI
LEIGKKHGITEIHPDVVSYVSHATQQRLQNLVEKLSETAQQRNISYKDDERYEQASDVRA
QLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQR
DANLTALAAIGPRKKRKVDSPGSGSGTEGSGSSAAVPGSSGVGTTRQFTRQRITRVNLRD
LIFCLENERETSHSLLLYKAFLK
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggatgaggttttcctgaacacggaggtggatgagaag
gtggtgagcgacctggtgggctccctggagtcccagctggcggcctccggccaccaccac
cagcaccacaaggcgcaggagcccctgagggccgctggggggctgctggggaaccatgtt
gtgagcagcagcagtagcagcagcagccctagccccagccctggaggagtagtagtagga
ggcaatgctaatgcccaaacagagagcagcagcggcagcaagatgggactgagtgcccca
gagatcacaaaagcaggggcaggaggagtgcaggggggtgttattaatcataacacccgg
tcccagacttcagctctggatggagccaccacaacgagcaccagcaccaccactgcagca
gcaggaggctctgaagtcactgctgctccagggaccctcagtcagggcaaatcggtggtt
atcagcaccatggcaactgccttgtccaccaggaatggcaagattgggaccacgacggtg
cagactttgaatgggagtaacgtggtgatgaactctcaccacacaggaagtgctgctttc
tctgggactcctgtgactgccaaccccgctcctgcacctgctgttgcccctctcgttaac
aatggacccggatccgtggggaaaggaaacgctgttaatgctgttttaccctcagcttct
aacactgtcatccagacttctttcctaaacactgctgtgtcctctgcatcctcctcctcg
cccacagtgatctcctcgcagccaccggcgagcgtcggcaccggggcgcccacggtgacg
ctggtgaggccccccatccacactgcaggacccacggtggctgcagctgctgcagccact
cagaacgggagcaatactgtgatcaattcaaccatcagtgtggggagttttcctgctgtt
gccacagccactgtgggatctggagtttccctccagacgtcgcttgtgaacagccagtct
ggttccagcgtgccagcagctcctgccacacaggtcatcaaatctgagtctcctaaaact
atagtccaggcagtatcccaacagcagacgctggctactgctggccagcccagtactaca
gggggtaacatgattattgggcaaactatgcaagctgggctctccaatgttgctcccaat
cctggtgggatacctcctgcagctcctggcacccccacaggaatggctaaaggcactgcc
aatacagtggcacaaagtctgccaaggactccaacaccaactacgagtggaatcagagca
actttgactcctacagttttagcacctcgtttgcctcagccacctcagaatccgactaac
attcagaattttcagttaccaccaggcatggtgctggtgcgcagtgagaacgggcagctg
ctgatgatcccccagcaagccctggcacagatgcaggcccaggcacacgcccagtctcag
cctcagaacactctgactcctcgtcctgctacacctaccagtgcacccccagtgcagata
tccacagtgcaggctccaggaacacccattattgcacgacaggtgacaccaactactatc
atcaagcaagtgtctcaggctcaaacaacagtgcaacccaccacaacgctacagcggccc
ccggttgtgcaacctcagatcgttctgggtggtactgcacaaacaaccacgttggggaca
gcaacagctgtacaaactggaactcctcagagaacagtgcaagggacaacggccacctcc
actgctgccacagaaactatggaaaatgtgaagaaatgcaaaaactttctgtccacatta
ataaaactggcatcatctggaaaacagtccacagagactgcggctaacgtgaaggaatta
gtacagagtctgctggatggaaaaattgaaccagaagattttaccagtaggctctacaga
gaacttaattcttcacctcaaccttaccttgtgcctttcctgaagaggagtttacctgcc
ttgagacagttaacaccagactctgcagctttcattcagcagagccagcagcagcagccc
acgacgcaggcaacgatagccacgatcccgtcggtgacgtccgtgctgctgagctcctcg
gtgcagcgcacggcgggcaaggccactgccactgtcaccagtaccctccagcaacctgtc
atcagcctcactcagcccacacaagttggtgtcagtaaacaagggcagtccacgccactg
gttattcaacagtctcaaaaagcaggggcattgataaggcctccacaagtaacgttgaca
cagacgcccatggtggcattgcggcaaccacacagtcgtatcatgctcaccactcctcaa
atccaactgaatcaactgcagacagtacctgtggtaaaaccagcagtattacctggaaac
aaagctattgccactgtttcgacacaagtagctgctgctcagaagaataaactgaaagaa
cctgggggaggctcttttagggatgatgatgacattaatgatgttgcatcaatggctgga
gtcaacctgtcagaagaaagtgctcggatattggcaacaaactctgagctcgtgggcaca
ttaacacggtcctgtaaagatgaaaccttccttttcccagcacctttacaaagaaggata
ttagaaataggtaaaaaacatggaataacagaaatccatcctgatgtagttagctacgta
tcacatgctacacaacaaagactacaaaacctcgtggaaaaactatcagagactgctcaa
caaaggaatatttcctacaaggatgatgaaagatatgaacaagcaagtgacgttcgggca
cagctcaagttctttgaacaacttgatcaaatagaaaagcagcgtaaagatgaacaagaa
agggaaattttaatgcgcgcagcaaagtctcgatctcgacaagaagatccagaacagctt
aggttgaaacagaaggccaaggagatgcagcagcaggagctagcacagatgagacagagg
gatgccaacctgactgcgttagctgccatcgggcccaggaagaaaaggaaagtcgattcc
ccaggatctggatcagggacagagggatctggttcgagtgcagcagtcccaggcagctct
ggagttggaacaaccagacagtttacgcgacaaaggataacgcgggtgaacctcagggac
ctcatattttgtttagaaaatgagcgagagacaagccattcactattgctatacaaagca
ttccttaagtaa
DBGET
integrated database retrieval system
