Agelaius tricolor (tricolored blackbird): 139599792
Help
Entry
139599792 CDS
T10815
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03020
RNA polymerase
Brite
Enzymes [BR:
atrc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
139599792 (POLR1A)
Transcription machinery [BR:
atrc03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
139599792 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139599792
NCBI-ProteinID:
XP_071303502
LinkDB
All DBs
Position
Unknown
AA seq
1708 aa
AA seq
DB search
MKPPKVVPWRRLVGVSFGMYTAEEIRKLSVKPITNPQYLDNVGNPAMNGLYDLALGPPDS
REVCATCMQNFSNCPGHFGHIELPLPVYNPLFFDKLYLLIRGSCLNCHMLTCPRAVVHLL
LSQMKVLQKGLLHAVHDLEIILNRFIEQCADATGSEIEEELNRHVQEMLQSSQTRDRCSN
VKNVCECRNKLVSQFWKAHMASKKCPNCKSRRSLVRKEHNSKLTVTYPSTMYHKSGQEGI
LDETAGIDESQLGKRGYLTPMTAKEYILALWKNEGFFLRYLFPGMDPHGSSEFSPDMFFL
DLLVVPPSRYRPVNRLGDRLFTNGQTVNLQAVMKDAQLIRKLLVFMAKEQCQPIKITEEF
QTETGEDSEPLDRSVLTTIPGQSIADKLYNAWIRLQSHVNIVFDSDMDKLITDKYPGIRQ
LLEKKEGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKE
LRQAVINGPKVHPGASMVINEDGSRTVLSATSLTQREAIAKQLLTPSSGAPQTGLKIVCR
HIRNGDVLLLNRQPTLHRPSIQAHRARILPAEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYTLAITDKQYLVPKDGKPLPGLIQDHMVSGVSMTLRGCFFTREQYMELVYRG
LTDKKGRIKTFPPAIMKPQRLWTGKQVVSTLLINIIPDNHAPLNLTGKAKIGGRAWVKGP
AKGCVNLDSMCESQVIIRDGELLCGVLDKAHFGSSAYGLVHCCYEIYGGETSGKVLTCLG
RLFTAYLQLYRGFTMGIEDILVKRDADHKRKKIIERSRQSGIEAVRAALNLPETASCEEV
QGKWQDAHLSKDQRDFNMVDMKFKEEVNNYNNEVNKVCMPLGLHRSFPENNLQLMVQSGA
KGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIKPS
EFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGED
GLDIPKTQFLQPEQFPFIAENYEVIQKTNHLDEALARMESHQANQQFKAIKKWRARHQNS
VQREGGFLLFSQKKLASLKAQLPGGEIKNGRDPATLQLLKMWYELDEKKQRKYLKKTNKC
PDPSLGVWRPDTYFASVSETFEKGVEGYINKWESENRRSYMHTALSSDRLKDLLYLKWQR
SLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIKTP
MMSVPVLNTKKALKKVKQLKKLLTRVCLAEVLEKVDIEESLHVKHKLNKHRLYKIRFHFL
PHEYYREEKCVKPRQILHFMETRFFKVLLEAIKRKTTKMASFNEVSTRKTTRKDLDDDQD
KTLNNLEAVAEEEENIVDAEADEGDGDATETKRRKNQEEEVDYESEEENGEENINENPED
EEAESEKEEGTPGAEEDQNRAEGEDSQHLSFVSQTKKGKDQLLKSAEVRVSAVVESHPSI
QDYTFDTENELWCEVSLALPLTKVYFDLSSLLASLARSTVIHEVKGITRCLLNESTSKEG
EKESVLQTEGINLAELFKYSDILDLNRLYCNDIHSMAKNYGIESALRVIIKEIKDVFAVY
GIAVDPRHLSLVADYMCFEGIYKPLNRIGIQSNSSPLQQMTFETSYKFLKDATMMGAHDE
LRSPSACLVVGKVVKGGTGLFDLKQPLT
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgcccaaagtggtgccgtggcggcggctggttggggtgtccttcgggatgtac
acggccgaggagatcaggaagctgagtgtgaagcccatcaccaaccctcagtacctggac
aatgtgggcaatccggccatgaatgggctctacgacctggccctgggacccccggactcc
agggaggtgtgtgcaacctgcatgcagaacttcagcaactgccctggacactttggccac
atagagctgcctctgcctgtctacaaccccctgttcttcgataaattgtaccttctgatc
agagggtcctgtttgaattgccacatgctgacgtgtccccgagccgtggttcacctgctg
ctgagccagatgaaggtgctgcagaaagggctgctccatgctgtccatgacctcgaaatc
attctcaacaggtttatagagcagtgtgcagatgcaacaggctcagaaatcgaggaggag
ctgaatcgccacgtgcaggaaatgttacagagctctcaaacaagagatcggtgctcaaat
gtcaaaaatgtttgtgagtgtagaaataaactggtatcccagttctggaaagcacacatg
gcttcaaagaaatgcccaaactgcaaatccaggagatcactggtacgaaaggagcacaac
agcaagctgacagtcacctatccttctacaatgtaccataaatcaggacaggaaggcatt
ctggatgaaacagcaggtattgatgaaagccagttagggaagagaggatacctgacacca
atgactgccaaggaatacatcctggctctgtggaagaatgaaggtttctttctgcgttat
ctcttccctggcatggatccccatgggagttcagaattcagtccagatatgttttttcta
gatctgcttgtggttccaccttcaaggtaccgtcctgtaaatcgcctcggagatcgcctg
ttcacaaacgggcagactgtgaacctgcaggctgtgatgaaagatgctcagctgataagg
aagctcttggttttcatggccaaagaacagtgtcagccaataaagattacagaagaattt
caaacagagacaggagaggatagtgaacctctggaccgttctgtgctgacaacaattcca
ggacagagcattgcagacaagctgtacaacgcctggatacgcctccagagccatgtcaac
attgtgtttgatagtgacatggacaagctgataacagacaaataccctggtattcgtcag
ctgttggagaagaaggaagggctgttccgcaagcacatgatggggaagcgcgtggatttc
gctgctcgctccgtcatttgtcccgacatgtacattgggaccaacgagattggcatcccc
atggtatttgccaccaaactgacctaccctcagccagtcactccctggaatgtcaaagag
ctgaggcaggctgtcatcaatggccccaaggtgcaccccggggcctccatggtcatcaac
gaggacgggtctcgcacggtgctgagcgccaccagcctgacccagcgcgaggccatcgcc
aagcagctcctcaccccctcctcaggggcaccccagacaggcctgaagatcgtgtgtcgg
cacatcaggaacggcgacgtgctgctgctgaaccggcagcccacgctgcaccggccgtcc
atccaggcgcaccgcgcccgcatcctgcccgctgagaaggtgctcaggctgcactacgcc
aactgcaaggcttacaacgctgacttcgacggcgatgaaatgaatgcccacttcccacag
agtgagctgggcagggcagaggcctacaccttggccatcactgataaacagtacctggtg
ccaaaggatggaaagccacttcctggcttgatccaggaccacatggtttctggagtcagc
atgacgctgcggggctgctttttcaccagagagcagtacatggagctggtgtaccgaggg
ctcacagacaaaaaagggagaattaaaacctttcctccagccattatgaagccacaacga
ttatggacaggaaagcaggttgtttccacattgttaataaacatcattccagacaaccat
gctccactgaatttgactgggaaagcaaaaattggtgggagagcctgggtaaagggacct
gcaaaaggatgtgtgaatcttgattcaatgtgtgaatctcaggttattatcagagatggg
gagttactgtgtggagtcctggacaaagctcactttggcagctctgcctatgggctggtg
cactgctgctatgagatctatgggggtgaaaccagtggcaaggtgctgacgtgcctgggg
cgcctcttcactgcttacctgcagctctacaggggcttcaccatggggattgaagatatt
ttggttaaacgtgatgcagaccacaaaagaaaaaaaatcattgaaaggtcaaggcagagt
ggtattgaagctgttagagctgctcttaatttgccagaaacagcatcatgtgaggaggtc
caagggaagtggcaggatgcccatctctccaaagaccagagggattttaacatggttgat
atgaaatttaaggaggaagtgaacaattacaacaatgaagtcaacaaggtttgcatgccc
cttggtctccacaggagctttccagagaacaatttgcagttgatggtacagtcaggagcc
aaaggatccactgtaaacacaatgcagatttcttgtttgctgggccagattgagctggaa
ggccgaagacccccactgatggcatctggcaaatcactgccatgtttccagccttatgac
ttttcccctagctcaggaggatttgtgactggcagatttctcactgggatcaaaccttct
gagttcttctttcactgcatggctggcagggaaggtcttgtggatacagctgtcaaaacc
agccgttctgggtacctgcaaaggtgtatcataaaacatttggaaggactggtggttcag
tatgacctgactgtacgagacagcgatggcagcgtggtgcagtttctgtatggagaagat
ggacttgatatccctaaaactcagttcttacaacctgagcagtttcctttcattgcagaa
aactatgaggtaatccagaagacaaaccatctggatgaagctttagcaaggatggagtct
caccaagctaaccagcagttcaaagccatcaaaaagtggcgagccagacaccaaaactct
gtgcaaagagaaggaggatttctgttgttttcccaaaagaaattggcaagtttgaaagca
cagcttccaggaggtgaaataaagaatggaagagatcctgctactttacagttgttgaag
atgtggtatgagcttgatgagaagaaacaaaggaagtacctgaagaagacaaataagtgt
cctgacccaagcctcggcgtttggcgtccagatacttattttgcatcagtttcagaaaca
tttgaaaagggagttgaaggctatatcaataaatgggaatctgagaacagacggagttac
atgcacacagcactttcttctgatagattaaaggatctgttgtatttaaagtggcagcgt
tctctctgtgacccaggagaagctgtggggcttcttgctgctcagagcattggggaacct
tcaacacagatgactctgaacacctttcactttgctggcagaggtgaaatgaatgtcaca
ctgggtattccaaggttgagggaaatactgatggtggccagctcaaacattaaaacacca
atgatgagtgttcctgtgctcaataccaagaaagctctcaaaaaggtgaaacagcttaag
aaacttctcacaagagtgtgcttggctgaggtcttggagaaagtggacattgaggagtcc
ctgcacgtgaagcacaagctgaacaagcatcgcctctacaaaatcagattccatttcttg
ccccatgaatattaccgagaggagaagtgtgtgaagcccaggcagatcttgcacttcatg
gaaacgaggttctttaaagttcttctggaagcaattaaaaggaagactacaaagatggca
tcttttaatgaagtcagcactcggaagacaactcggaaggatttagatgatgaccaagac
aagacactgaacaatctggaagctgtagcagaggaagaagagaacattgttgatgcagaa
gctgatgaaggggatggtgatgctacagaaacaaaacggaggaagaaccaggaggaagag
gttgattatgagagtgaagaagagaatggggaagaaaacattaatgagaatccagaagat
gaagaggctgaatctgaaaaagaagaagggactcctggtgctgaagaggatcagaacaga
gcagagggtgaagattctcagcatctttcttttgtgtctcagactaaaaaagggaaagat
caattgcttaagtcagcagaggtgcgagtgagcgctgttgtggagagccacccatccata
caggattacacctttgacactgaaaatgagctttggtgtgaggtttccttggcactgcca
ctgaccaaggtgtactttgacctgtcctccctgctggcatcgctggcgcgcagcacggtg
atccacgaggtgaagggcatcacgcgctgcctgctcaacgaaagcaccagcaaggaggga
gagaaggaatctgttctccagacagaagggataaacctggcagagctcttcaaatactct
gatattttggacctgaacagactttattgcaatgatatccattccatggctaagaattat
ggaattgaatcagccctgagggtgattataaaggaaataaaagatgtatttgctgtatat
ggaattgcggtagaccctcgacacctttcacttgtggcagattacatgtgttttgaagga
atttacaaaccactgaatcgcattggaattcagtccaactcctcccctctgcagcagatg
acgtttgaaaccagctacaaattcttgaaggatgcaacaatgatgggtgcccacgatgag
ctacgatccccttcggcctgcctggtggttggaaaggttgtcaaaggagggactggcttg
tttgacctcaagcagcccctgacatag
DBGET
integrated database retrieval system
