Agelaius tricolor (tricolored blackbird): 139599828
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Entry
139599828 CDS
T10815
Symbol
RNF4
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF4
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atrc04121
]
139599828 (RNF4)
Enzymes [BR:
atrc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139599828 (RNF4)
Ubiquitin system [BR:
atrc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139599828 (RNF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf-rbx1
zf_RING_Vps8
zf-UDP
zf-C3HC4_4
Prok-RING_4
zf-RING_16
Rtf2
zf-RING_10
zf-RING_6
Sina_RING
zf-RING_Vps41
zf-RING_11
TerY_C
TRAF3_RING
zf-P11
DZR
Motif
Other DBs
NCBI-GeneID:
139599828
NCBI-ProteinID:
XP_071303597
LinkDB
All DBs
Position
Unknown
AA seq
300 aa
AA seq
DB search
MKLSLCPPILCDSRSAGNVPRLLSPHLHFITGCGKTQLFFFXFFFLYSVFGIIESLEEHH
PLIFRNLEFLSVSYLKESKEIIAIASLPLLFWCLYLFFCGFRSRSTMSTTQRKRRGGTVN
SRQARKRSRLMASTAEMASEAEPIELEESAGEEVVDLTCESSDPVVVDLTHNDSIVIVEE
NQRQRRNLRLRSQRQADSCVLSSDDEDETRDNDVYVADKAARELGPLEEETASSKPSGTV
SCPICMDVYSEIVQSGRLIVSTKCGHVFCSQCLRDSLRNANSCPTCRKKLTHRQYHPIYI
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtcgctctgccctcccattttgtgtgacagcaggagtgcggggaatgttcct
cgcctgctcagcccgcacctgcacttcattacaggatgtggaaagactcaactatttttt
ttttaatttttttttctgtattctgtttttgggattattgaaagtttggaagaacatcat
cctctaatcttcagaaacctggagtttttatcagtgagctacctaaaggaatctaaggaa
attatagctatagcttccttgccattacttttttggtgtttgtacctctttttctgtggt
tttagatcaagaagcactatgagcacaactcaacggaagcgccgtggaggaacagttaat
tctaggcaagctcgaaaaagaagcaggctcatggcttctactgctgaaatggcttcagaa
gcagagcctatagaacttgaagaaagtgctggtgaagaagtagtagatctcacatgtgaa
tcttctgatcctgtagttgttgatctaactcacaatgattccattgtgattgttgaagag
aaccaacgacagaggagaaatctgagactaagaagccagagacaggcagacagctgtgtg
ctgagcagtgatgatgaagatgaaaccagagataacgacgtgtacgtggctgataaagca
gctcgagaactgggaccgctggaagaggaaactgcaagttcaaagccatctggtactgtt
agctgtccaatttgcatggatgtctactcagagattgtgcaaagtggacgactgattgtg
tcaacaaaatgtggccatgttttctgcagtcagtgcctccgtgattcccttaggaatgcc
aactcttgcccaacttgcaggaagaaactcactcacagacagtatcatcccatctatata
tga
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