Agelaius tricolor (tricolored blackbird): 139599960
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Entry
139599960 CDS
T10815
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03440
Homologous recombination
atrc03460
Fanconi anemia pathway
Brite
Enzymes [BR:
atrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
139599960 (BRIP1)
DNA repair and recombination proteins [BR:
atrc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
139599960 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
139599960 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139599960
NCBI-ProteinID:
XP_071303819
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Position
Unknown
AA seq
1238 aa
AA seq
DB search
MPSDGAEYTIGGVKILFPCKAYPSQLAMMNAIVKGLNSRQHCLLESPTGSGKSLALLCSA
LSWQQALYEKSVPTSSCAKEDRKAEPSPPCHCRCHSQPRSSEAATSGTPSAPCSAHYPDP
GTSRKPGSPLTNTECKENETLASKLSAKKKLSLCASENEDFQVDRKRIRPLETEQQVRKR
HCFAKGVQVVDALQVYHQRKNGELIVHSEKSMKTTTCSPQTPPGPCTECSCASGKDPGKD
PSHTKKKENGDRLCVPKIYFGTRTHKQISQISRELKRTAYSCVPMTILSSRDYTCIHPVV
SHSSNRSEMCVELLEGKHGKSCSFYHGVHKLSEQPALQPAPGLAQAWDIEDLLRLGRKLR
ACPYFAARELLVGADIVFCPYNYLLDPQIRDSMDINLKDQVVILDEAHNIEDCARESVSY
GVSERQLRAAREELDFMVSNSIRQRHHEPLRAVCCSLINWLQESSGQLVERAYESACKVW
SGKEMLNFLYQMGITGITFPILQKHLVAVLEKEEKVSMHGREEIIEVPVVSPAAQIMLKG
LFMVLSCLFKENSRFADDYRVALQQTYTWMTEDQCDDADESSFFPRPKHKKSSRQKTLVH
MLNFWCLNPAVAFSDLNEVRTIVLTSGTLSPMDSFSSELGVKFSIQLEANHVIRNSQVWV
GTVGSGPSGRELCATFQHSETFEFQDEVGALLLSVCQTLGQGILCFLPSYKMLDKLKERW
MHTGLWRNLEDVKTVIAEPQGGAKSDFDELLKTYYDAIKCKGEKDGALLMAVCRGKVSEG
LDFCDENARAVVTIGIPFPNVKDLQVELKRKYNDQHKSTRGLLSGSQWYEIQAYRALNQA
LGRCIRHRNDWGALILVDDRFRKNPNKYITGLSKWIRQQVQHHGSFGSALRSLRAFALRN
QSGAEPSPGPGSELPAQPRHLPQGSPQENSAPLSPGAPDTRQEQNLDSGVDFAASISSVP
PTAWDQPSGSTAAVKQSDQKVDVESHSHHVKQRRKDMDCTPKMAAIKIEREEMNGWGNAD
VVEEKFCSEALTSTPAAQNCRATESSRQQHGNGPRDLVDHCNQCQSALIAEHKASGAESC
LETSHVSLGSAEAPGAEGHPGAEPCRELPSALDEDEDESIYFTPELYDDAEPEEQRTEPP
VPACSTSGLWGECGNSTVPAAPFATSTSGAQNGPGKAEAGRSPHGTMEDVRSRDSTAGAA
GAEQGGAQEMSTPKRKISLSRSRNKGVSSSLLGSGGTW
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagatggggcagaatacaccatagggggggtgaagatcctgttcccctgcaag
gcttacccctcccagctggccatgatgaacgctattgttaaaggcttgaatagcaggcag
cactgtttgctggagagccccacaggaagtggcaaaagcttggcattactgtgttctgca
ttatcatggcagcaggctctgtatgagaagtcagtgccaacctcgtcgtgtgccaaggag
gacaggaaggcagagccatccccaccctgtcactgcaggtgtcactcccagcccaggagc
agcgaggctgcaaccagtgggactcccagtgctccttgttctgcccattaccctgaccca
ggaacctccaggaaacctgggagccctctgacaaacacagaatgtaaggaaaatgaaaca
ttagcttcaaagctgtctgccaaaaagaagttatctctttgtgccagtgagaacgaggat
ttccaggtagacaggaagaggattcgtcctttggaaacggagcagcaggttagaaaacgc
cactgctttgctaaaggagtgcaggtggttgatgctctgcaagtttatcatcagaggaaa
aatggagagctgattgttcactctgaaaaaagcatgaaaaccaccacttgttctccccaa
acacctcctggcccttgcactgagtgttcctgtgcttctgggaaagaccctggtaaagat
cccagtcacacaaagaagaaagaaaatggagatcggttgtgtgttcccaaaatttatttt
gggacacgaacacacaagcaaatcagccagatcagcagggagctgaagaggacagcgtat
tcctgtgtgcccatgacaatcctttccagcagggactacacctgcattcaccctgtggtg
tcccacagtagcaacaggagtgaaatgtgtgtagaattgctggaaggaaaacatggcaag
tcctgctctttttaccacggagttcacaagctcagcgagcagccagccctgcagcctgcc
ccggggctggcccaggcctgggacatcgaggacctgctgaggctgggcaggaagctccgg
gcctgtccctactttgcagccagggagctcctggtgggggcagacatcgtcttctgtccc
tacaattacctcctggacccgcagatccgggacagcatggacattaacctaaaagaccaa
gtagtgattttggatgaagcccacaacatcgaggactgcgcccgggagtccgtgagctac
ggcgttagcgagaggcagctgcgagctgcccgcgaggagctcgacttcatggtcagcaac
agcatcaggcagaggcaccacgagcccctccgagctgtgtgctgctccttgatcaactgg
ctgcaggagagctctgggcagctggtggagagagcctatgaaagtgcctgtaaggtgtgg
agtggcaaggaaatgctcaacttcttgtaccaaatgggaataactggcattacttttccc
attttacagaaacatcttgttgctgtcctggaaaaagaagaaaaagtgtctatgcatggg
agagaggaaattattgaggtgccagttgtgagccctgcagctcagatcatgctcaaaggc
ctcttcatggtcctttcctgcctcttcaaagagaacagcaggtttgcagatgattacagg
gttgctctacaacaaacttacacctggatgactgaagaccaatgtgatgatgcagatgaa
agttccttcttcccgaggcccaagcacaaaaagagttcaaggcagaaaacccttgtccac
atgctgaatttctggtgcttgaaccctgctgtggcgttttctgacttaaatgaagttaga
acaattgttctgacatcaggcacactctctcccatggattccttctcctcagagcttggt
gtgaagttttccattcagctggaggcgaatcacgttatccggaattcccaggtgtgggtt
ggcacggtgggcagcggccccagcgggcgggagctgtgcgccaccttccagcacagcgag
accttcgagttccaggatgaggtgggagccctgctgctgtcagtctgtcagacacttggc
caaggaattttgtgctttttgccatcctataagatgctggacaagttaaaggagcgttgg
atgcacacaggcttgtggaggaacctggaggatgttaaaacagtcattgcagagccccag
ggaggggccaagagtgactttgatgagctgctgaaaacctactatgatgcaatcaaatgt
aaaggagaaaaagatggggctctcctgatggctgtgtgcaggggcaaggtcagtgagggg
ctggatttctgtgatgagaacgccagggccgtggtgaccatcgggatccccttccccaac
gtcaaggacctgcaggttgaattaaagaggaagtacaatgaccagcacaaaagcacaaga
ggccttttatcagggagtcagtggtatgaaattcaagcttacagagctctcaaccaagcc
ctgggaaggtgtataaggcacaggaatgactggggggctcttattttagtggatgaccgc
ttcaggaagaaccccaataaatacataactggactgtccaagtggatccggcagcaggtg
cagcaccacggctccttcggcagcgccctgcgctccctgcgcgccttcgctctccgcaac
cagagcggtgcagagccctccccagggcccggctctgagctccctgcacagcccaggcac
ctcccacagggctctcctcaggagaacagcgctcctctgtcccctggtgctcctgacaca
aggcaggagcagaatttggactcaggagttgattttgctgcaagcatcagctcagttcct
cccacagcatgggatcagccaagtggcagcacggcagcagtcaaacaaagtgaccagaaa
gttgatgtggagagccattctcaccatgtaaaacagagaaggaaagacatggactgcacc
cccaaaatggcagcaatcaaaatagagagagaagaaatgaatggttggggcaatgctgat
gttgtggaggagaaattctgctctgaggcactgacttcaactcctgcagcccagaactgc
agggccacagagagcagcaggcagcagcatgggaatgggcccagggaccttgttgatcat
tgcaatcaatgccaatcagcattaattgcagagcacaaagcaagtggagcagaatcatgt
ttggaaacaagtcatgtttcacttgggagtgctgaggccccaggtgctgaaggacatcct
ggagctgagccctgcagggagctcccttcagcattagatgaggatgaggatgagagcatt
tacttcactccagaactgtatgatgatgcagagccagaggagcagagaactgagccccca
gtcccagcctgttccacctctgggctttggggggaatgtgggaactccacagtccctgct
gctccttttgccaccagcacctcaggagctcagaatgggcctgggaaagctgaggctggc
aggagcccccatgggaccatggaggatgtgaggagcagggacagcacagctggggctgca
ggagcagagcagggaggagctcaggagatgagtaccccaaaaaggaaaatcagcctctcc
agatcccgaaataaaggtgtgtcatcctctctgctgggcagtggtggcacctggtga
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integrated database retrieval system
