Agelaius tricolor (tricolored blackbird): 139600015
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Entry
139600015 CDS
T10815
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
139600015 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atrc04121
]
139600015 (RNF43)
Enzymes [BR:
atrc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139600015 (RNF43)
Ubiquitin system [BR:
atrc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139600015 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
DUF2254
KIAA1549
Motif
Other DBs
NCBI-GeneID:
139600015
NCBI-ProteinID:
XP_071303952
LinkDB
All DBs
Position
Unknown
AA seq
826 aa
AA seq
DB search
MSAGPQVQLAVLWPWLLMATLQAGLGHTGLALAAAVESERAAAQKAIIRVIPLKVEPIIL
EGEFASVAEVTPAEGKLLQSHPLSLCNTSEDEHTESGFITIVKLEQPDRDPNPCLSLANK
AKLAGERGARAILFDITDDESAADQLRKPRGLSQPVVLIRGHDAELLMGVVNKNREAHVK
IEVKEPPAWPDYDVWILLTVVSTVVVIILIFVVRTKCQLNRTQDSVQQQTLQAIGQLATR
RYQPRARPAPRWDSASSCSSAPVCAICLEEFSEGQELRIISCSHEFHRECVDPWLQQHHT
CPLCMFNILARDSGDQAMAASSRLVPQDMEPGRRLHLFRQHPGHALYHLPQAYPQRNLRS
FPPESAHGNPFFHSPELSQLDFGTIHYMPYRPATSLLACGHVAPLTPGLLGQQHPNPSAC
RQVLAPHRTCPLQPQPPCVAPKAVVAQKQHRVPTLRRGLGHGLQHNSSGSGESYLTEHSG
YLADGPGSDSSSGPCHGSSSDSMLNCTDVSLQGIHGSCSTFRSSLSSDYDPFVYCSSEGP
ATDHGQEQLRLPRERRPRSLDLMVPQGAALAKPRVLSHIHYHHHQHHHYRQDAECPPGRA
GQGPGPRKSRYSGAKVAFHSARTQKRTEKSHHSQQPLESSAVLQEAAPAGQPACPQEGQE
PPHTPSTSSNRLDFSVDANRQLGAVPLSPRHSLQSRHHRRKRKCPLELDPALLAKDSAEP
GACNTHLPPGHPTGYRCSPEAQPLIPSAPLPSSSQPLWKCLVPQSSSELRKQEEGLSGQE
RNHSVPADFSGTCTPRHSLSVRLHCPSQQGGQESEEEVQDVHEHSV
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctggcccccaggtgcagctggctgtcctctggccttggctgctcatggcgacc
ctgcaggcaggactgggccacaccgggctggcgctggcggcggccgtggagtcggagcgg
gcggcggcgcagaaagccatcatcagggtcatcccgctcaaagtggagcccatcatcctg
gaaggggagttcgccagcgtcgccgaggtgactccggccgaagggaaactgctccagtcc
cacccactatccctgtgcaacaccagcgaggatgaacacacggaatcgggattcatcacc
atcgtcaagctggaacagccggatcgggatcccaacccctgcctgtccctggccaacaag
gcaaagctggcaggggagcgtggagcccgtgcgatcctttttgacatcaccgatgatgaa
agtgctgctgatcagctgaggaagcccagaggcctgagccagcctgtggtcctaatcagg
ggccatgatgctgagctcctcatgggcgttgtgaacaagaacagagaggcccacgtgaag
atagaggtcaaggagccaccagcttggccagactacgatgtgtggattcttctcacagtg
gtcagcactgtggtcgtcatcattttgatttttgttgtccgcacaaagtgccagctgaac
aggactcaggactcggtgcagcagcagaccctgcaggccatcgggcagctggccacacgc
cgctaccagccccgggcacggccggccccgcgctgggactcggccagcagctgcagctcc
gccccggtctgtgccatctgcctcgaggagttcagcgaggggcaggaactgcggatcatc
tcgtgctcccacgagttccatcgggagtgtgttgacccttggctgcagcaacaccacacg
tgtccactttgcatgttcaatattcttgccagagactcgggggaccaggccatggctgcc
agctccaggctggtccctcaggacatggagccggggcggcgactccaccttttccgccag
catccaggacatgccctttaccacctcccacaagcatatcctcagaggaacctcaggagc
tttcccccagagtcagcccatggcaaccccttcttccactctccagagctctcccagttg
gattttggcaccatccactacatgccctacagaccagccacctccctactggcctgtggc
cacgtggccccactcaccccaggcttgctggggcagcagcaccccaacccctctgcatgc
aggcaggtgctggcaccacacaggacgtgtccccttcagcctcagcccccctgtgtggca
cccaaggcagtcgtggcacagaagcagcaccgtgtgcccaccctgcgccgagggcttggc
cacgggctccagcacaacagcagtggctctggggagagctatctcacggagcatagcggg
tacctggctgacgggcccggcagcgactccagctcagggccctgccatggctcctccagt
gactccatgttgaactgcacggacgtcagcctgcagggcatccatggcagctgctccacg
ttccgcagctccctcagcagcgactatgatccctttgtgtactgcagctccgagggcccc
gccacggaccatggtcaggagcagctgcggctgcccagggagaggcggcctcggtccttg
gacctgatggtgccccagggggctgctctggccaagccccgggtgctcagccacatccac
taccaccaccaccagcaccaccactacaggcaggacgcggaatgtccccctgggcgagcc
gggcaggggcctgggccacgcaaatcccggtattccggggccaaggttgccttccacagt
gctcggacacaaaagagaactgagaaaagccatcactctcagcagcctctggaaagcagt
gccgtgctgcaggaggcagctccagcaggccagccagcctgtccccaggaaggccaggag
ccccctcacaccccctccacttcttcaaacaggctggacttcagtgtagatgccaacaga
caactgggagctgtcccgctgtcccccagacacagcttacagagcaggcatcaccgaagg
aaaagaaagtgtcccctggagctcgaccctgctctcctggccaaggactcagccgagcct
ggagcctgcaacactcaccttcctcctggccatcccactggctaccgctgctctcctgaa
gcccagcccctgatcccaagcgctcccctgcccagcagctcccagccgctctggaaatgt
ttagtgccacagtccagctccgagctgaggaagcaggaggaggggttgtcaggacaggag
agaaaccactcagttcctgcggatttctcagggacgtgcacccccaggcacagtctgagt
gtccgccttcactgcccatctcagcagggtggtcaggaatctgaagaggaggtccaggat
gtccatgaacactcagtttaa
DBGET
integrated database retrieval system
