Agelaius tricolor (tricolored blackbird): 139600024
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Entry
139600024 CDS
T10815
Symbol
UBC
Name
(RefSeq) polyubiquitin-C isoform X1
KO
K08770
ubiquitin C
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03320
PPAR signaling pathway
atrc04120
Ubiquitin mediated proteolysis
atrc04137
Mitophagy - animal
atrc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139600024 (UBC)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139600024 (UBC)
04137 Mitophagy - animal
139600024 (UBC)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
139600024 (UBC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atrc04121
]
139600024 (UBC)
Ubiquitin system [BR:
atrc04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
139600024 (UBC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
139600024
NCBI-ProteinID:
XP_071303976
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MARAGPSVPEGGCESLPGRGSGGAAAGRVRGAGPALPRCRSAGGRGSAAAALPSGGPWGC
GAALPGVNMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS
DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
STLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK
QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD
KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Y
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgggccgggccgtccgtgccggaaggcggctgtgagtcactaccggggcggggg
agcggcggcgctgccgcagggcgggtccgcggggcgggcccggccctccctcggtgccgc
agtgcgggcggtcgcggctccgctgccgcagcgctgccctcgggcgggccctgggggtgc
ggtgctgccctgccgggggtcaacatgcagatctttgtgaagaccctgactggcaagacc
atcacccttgaggtggagcccagtgacaccatcgagaacgtgaaggccaagatccaggat
aaggaagggatccctcctgaccagcagaggctgatctttgcagggaagcagctggaagac
gggcgcaccctgtccgactacaacatccagaaagagtcaactctgcaccttgtgctgcgc
ctcagaggtggcatgcagatctttgtcaagaccctgactggcaagaccatcactctcgag
gtggaacccagtgacaccatcgagaatgtgaaggccaagatccaggacaaggagggcatt
ccccctgaccagcagaggctgatcttcgctggcaagcagctggaggatgggcgcaccctg
tccgactacaacatccagaaggaatccaccctgcaccttgtcctgcgcctcaggggtggc
atgcagatctttgtcaagaccctgactggcaagaccatcaccctggaagtcgagcccagt
gacaccattgaaaatgtcaaagccaagatccaggataaggaagggatccctcctgaccag
cagaggctgatcttcgctggcaagcagctggaggatgggcgcaccctgtccgactacaac
atccagaaggaatccaccctgcacctggtgctgcgcctcagaggtgggatgcagatcttt
gtcaagaccctgactggcaagaccatcacccttgaggtggagcccagtgacaccatcgag
aatgtgaaggccaagatccaggataaggaagggatccctcctgaccagcagaggctgatc
tttgcagggaagcagctggaagacgggcgcaccctgtccgactacaacatccagaaggaa
tccaccctgcacctggtgctgcgcctcaggggtggcatgcagatcttcgtgaagaccctg
actggcaagaccatcaccctggaagtcgagcccagtgacaccatcgagaatgtgaaggcc
aagatccaggacaaggagggcattccccctgaccagcagaggctgatcttcgctggcaag
cagctggaggatgggcgcaccctgtccgactacaacatccagaaagagtcaaccctgcac
ctggtgctgcgcctcaggggtgggatgcagatcttcgtgaagaccctgactggcaagacc
atcaccctggaagttgagcccagtgacaccattgagaatgtgaaggccaagatccaggat
aaggaagggatccctcctgaccagcagaggctgatctttgcagggaagcagctggaggat
gggcgcaccctgtccgactacaacatccagaaagagtcaaccctgcacctggtgctgcgc
ctcaggggtgggatgcagatctttgtcaagaccctgactggcaagaccatcacccttgag
gtggagcccagtgacaccatcgagaatgtgaaggccaagatccaggataaggaagggatc
cccccagaccagcagaggctgatcttcgctggcaagcagctggaggatgggcgcaccctg
tccgactacaacatccagaaggaatccaccctgcacctggtgctgcgcctcagggggggc
tattaa
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