KEGG   Agelaius tricolor (tricolored blackbird): 139600117
Entry
139600117         CDS       T10815                                 
Symbol
NUP88
Name
(RefSeq) nuclear pore complex protein Nup88
  KO
K14318  nuclear pore complex protein Nup88
Organism
atrc  Agelaius tricolor (tricolored blackbird)
Pathway
atrc03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:atrc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    139600117 (NUP88)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atrc03019]
    139600117 (NUP88)
Messenger RNA biogenesis [BR:atrc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     139600117 (NUP88)
SSDB
Motif
Pfam: Nup88 STX6_10_61_N
Other DBs
NCBI-GeneID: 139600117
NCBI-ProteinID: XP_071304115
LinkDB
Position
Unknown
AA seq 721 aa
MAAECGPAEQWRAALPQHALFGRLRERAPAAPRPPRLRDLLCGLGSDLLLWDGPAAALLA
IGLRRLGTGTDPAALGRYQTLLCINPPLFDVHQTLLSPAQHHVALIGTKGLMVLELPKRW
GKNSEFEGGKSTVNCSTIPIAERFFTSSTSLTLKHAAWYPCDTMEPHIVLLTSDNTIRFY
SLKVPHTPIKVIVLSDTEEETLTIKTGRAYTASLGETAVAFDFGPQVPVPKHVLGQRGSE
EVLGYPLYILYENGETFLTYVSLLQSTGSPGKLLGPLPMHPAAEDNYGYDACAVLCLPCV
PNILVIATEAGMLYHCVVLDGEEDDEQSEKSWDPRSDLIPSLYVFECVELELALKLATGD
EEDPLESDFSCPIKLHRDPKCPSRYHCTHEAGVHSVGLTWINKLHKFLGSDEEDKDSLQE
LGAEQKCFVEHILCTKPLPCRQPAPIRGFWIVSDVLGPTMICITNSYECITRPLLSTVHP
ASPPLLCTREDKELAVSPLRIVAEAEHSFEKHIQGILQRSSANPLHLKSADKDAAPPPEE
CLQLLSRATQVFREEYILKQDLAKEEIQQRVKLLWGQKKKQLEDLNYCREERKSLREMAE
RLADKYEEAKEKQEDIMNRMKKVLRSFHSQLPVLSDTEKDMKKELQTIHDQLQHLSNAIR
QVKMKKEYQQKQMEKGRSPRKPSISLSAYQSKCIQAVLREEGEHIREMVKQINDIRSHVN
F
NT seq 2166 nt   +upstreamnt  +downstreamnt
atggcggccgagtgcggcccggcggagcagtggcgcgcggcgctgccgcagcacgcgctg
ttcggccgcctccgcgagcgcgcgcccgccgccccccgcccgccgcggctccgcgacctc
ctgtgcgggctgggctccgacctgctgctctgggacgggcccgccgccgccctgctcgcc
atcggcctgcgccgcctcggcaccggcaccgaccccgccgcgctcggccgctaccagact
cttctgtgcataaacccgccccttttcgacgtgcaccagacgctgctgagccctgcccag
caccatgtggcgctcattggtaccaaggggctcatggtgctggagctgcccaagcgctgg
ggcaagaattccgagtttgaaggtgggaaatccacggtgaactgcagcaccattcctata
gcggagcggttcttcaccagctcaacctccctgaccctcaagcatgcagcctggtacccc
tgtgacaccatggagccccacattgtgctcctgacatcagataacaccatcaggttctac
agtctgaaggtgcctcacacacccatcaaagtgattgtgctttcagacactgaggaggag
actcttaccatcaaaacagggagagcctacaccgcgtccctgggcgagacggccgtggcc
ttcgacttcgggccgcaggtgccggtgccgaagcacgtcctgggccagcgcggcagcgag
gaggtgctgggctaccccctgtacatcctctatgagaatggagagaccttcctcacctat
gtcagcctgctccagagcacgggcagcccggggaagctgctggggcccctgcccatgcac
ccggctgccgaggacaactacggctacgacgcctgcgccgtgctgtgcctgccctgcgtg
cccaacatcctggtcatcgccaccgaggcgggcatgctctaccactgcgtggtgctggat
ggagaggaggatgatgagcagtcagagaagtcctgggaccccagatccgatcttattcct
tccctgtacgtgtttgaatgtgttgagctggaacttgcactgaaactggcaacaggagat
gaggaagatcctttggagtctgacttctcttgcccaatcaagctgcaccgagatcccaaa
tgtccctctagataccactgcacacacgaagctggtgtccacagtgtgggcttgacatgg
atcaataaactgcacaaattccttggttcagatgaggaagacaaagacagtttacaagag
ctgggagcagaacagaaatgctttgttgaacatattctttgtacaaaaccactgccatgc
aggcagcctgctccaattagaggattttggatcgtttctgatgtcctggggcccaccatg
atttgcatcaccaacagctatgagtgcattacaaggcctctcttgagcaccgtgcaccct
gcctcccctcccctgctgtgcaccagggaggacaaggagctggccgtgtccccgctgcgc
atcgtggccgaggcagagcattccttcgagaagcacatccagggcatcctgcagcgcagc
tctgccaaccccctgcacctcaaatctgcagataaagatgctgctcctccccctgaagaa
tgccttcagctcctcagcagagccacccaggtgttcagagaggaatatatactgaaacag
gacctggcaaaggaggagattcagcaaagagtgaagctgctgtggggacagaaaaagaaa
caactggaggatctgaattactgtcgagaggagaggaaaagcttgcgggaaatggccgag
cgcttggctgacaagtatgaggaagccaaggagaagcaagaagacatcatgaacaggatg
aagaaagtccttcggagtttccactctcagcttcctgttctatctgacactgaaaaagat
atgaagaaggaactgcagacaatccatgaccagctgcagcacctgagcaatgccatcaga
caggtgaaaatgaaaaaggaataccaacagaaacagatggagaagggccgcagcccccgc
aagcccagcatcagtctcagtgcctaccagagcaagtgcatccaggctgtcctgagagag
gagggagaacacatccgggagatggtgaaacagatcaacgacatcaggagccacgtgaac
ttctga

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