Agelaius tricolor (tricolored blackbird): 139600168
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Entry
139600168 CDS
T10815
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139600168
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
atrc04040
]
139600168
Ion channels [BR:
atrc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
139600168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_5
Ank_4
PKD_channel
Motif
Other DBs
NCBI-GeneID:
139600168
NCBI-ProteinID:
XP_071304228
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MSSILGKMKKFGSFDMEESEVTDEHTDGEDSVQEAPDNPQGPLSSRVHPPKSNIFARRGR
FVMGDSDKDMAPMDSFCQMDHLMAPSVIKFHVNLERGKLHKLLSTDSITGCSEKAFRFYD
RRRIFDAVAQGNTKDLSDLLLYLNRTFKHLTDEEFKEPETGKTCLLKAMLNLHDGKNDTI
PLLLDIARKTGTLKEFVNAEYTDNYYKGQTALHIAIERRNMYLVKLLVQNGADVHARACG
EFFRKIKGKSGFYFGELPLSLAACTNQLCIVKFLLENPYQAANIAAEDSMGNMVLHTLVE
IADNTKDNTKFVTKMYNNILILGAKINPILKLEELTNKKGLTPLTLAAKTGKIGIFAYIL
RREIKDPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEILAYSSETPNRHEMLL
VEPLNRLLQDKWDRFVKHLFYFNFFVYTMHITILTAAAYYRPVQKNEKPPFTFGYSTGEY
FRVTGEILSVLGGLYFFFRGIQYFVQRRPSLRTLIVDGYSEVLFFVHSLLLLSSVVLYFC
GQELYVASMVFSLALGWANMLYYTRGFQQMGIYSVMIAKMILRDLCRFMFVYLVFLLGFS
TAVVTLIEDDNEGQETNISDYARCCHLRRGRTSYNSLYYTCLELFKFTIGMGDLEFTENY
RFKSVFVILLVLYVILTYILLLNMLIALMGETVNKIAQESKSIWKLQRAITILDIENSYL
NCLRHSFRSGKQVLVGITPDGQDDYRWCFRVDEVNWSTWNTNLGIINEDPGYSGDLRRNL
SFSIKPGRVSGKHWKTLVPLLKDGEKRREEPHKPPEEVKLKPVLEPYFEPEDSEELKESI
PKSA
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccatccttgggaagatgaagaagtttggcagttttgacatggaggaatctgaa
gtgacagatgaacacacagatggggaggactctgtccaggaagcccctgacaacccccag
ggcccactcagctcccgggtgcacccacccaaaagcaacatttttgcaagacggggccgc
tttgtgatgggggacagtgacaaggacatggctcccatggactccttctgccagatggat
cacctgatggcaccttctgtcatcaaattccatgtgaatttggagaggggcaaacttcac
aagctcctatctacagattccatcacaggctgctcagaaaaagctttcagattttatgac
cgcagaaggatctttgatgctgtagcccaaggcaacacaaaggacctcagtgacctgcta
ctctaccttaacagaaccttcaagcatctcacagatgaggagttcaaagagcctgaaact
ggcaaaacctgtttactgaaagccatgctgaatctacatgatgggaaaaatgataccatt
cccttgctgctggatattgcaaggaaaactggaactctgaaagagtttgttaatgcagaa
tatactgacaactactacaagggccagactgctcttcacattgccatcgagaggaggaac
atgtacctggtgaagctcctggtccagaatggagcagatgttcatgccagagcctgtggg
gagttcttcaggaaaatcaaagggaaatctggcttttattttggagagctgcctttgtcc
ctggctgcctgcaccaaccagctctgcattgtgaagttcctcctggagaatccctaccag
gcagccaacattgctgctgaagactccatgggcaacatggtcctgcacacactggtggag
attgcagataacaccaaggataacaccaagtttgtgaccaagatgtataacaacatattg
atccttggtgccaaaattaatcccatcctcaagctggaagaactcaccaacaagaaaggg
ctgactcctttaactctggcagccaaaacagggaagatagggattttcgcttacatcctc
agacgggagatcaaagaccccgagtgcagacacttgtccaggaagttcactgaatgggcc
tatggacctgtccactcctctctttatgacctgtcctgtatagacacctgtgagaaaaat
tcagtgctggagatccttgcctacagcagcgagacaccaaaccgtcacgagatgctgctg
gtggagccccttaacaggctgctgcaggacaagtgggaccgctttgtcaagcatttgttt
tacttcaacttcttcgtctacaccatgcacatcaccatcctcactgcagctgcttactac
agacctgtacagaagaatgaaaagcctccatttacctttggttacagcactggggaatat
tttcgagtaactggagagatcctgagtgtactgggaggcctctatttctttttcagaggg
atccagtatttcgtgcagaggcgcccatcactcaggacactgatagttgatggctacagt
gaggttcttttcttcgtccactccctgctcctgctgagctctgtggtgctctacttctgt
ggccaggagctctacgtggcttccatggtgttctccctggccctgggctgggccaacatg
ctctactacacgcggggcttccagcagatggggatttactcggtcatgatcgccaagatg
atccttagagatttatgtcgcttcatgtttgtctatcttgtattcctcttgggattttcc
acagctgtggtgactttgattgaagatgacaacgaggggcaggaaacaaacatctctgac
tatgccaggtgctgccacttgaggcggggccgcacctcctacaacagcctctactacacc
tgcctggagctcttcaagttcaccattggcatgggggacctggagttcacagagaattac
aggttcaaatctgtgtttgtcatcctgctggtgctctatgtcatcctcacctacatcctc
ctgctcaacatgctcattgcactgatgggagagactgtcaacaaaattgcacaggagagc
aagagcatctggaaactccagagagccatcaccatcctggacattgagaacagctacttg
aactgtctgaggcactcgttccgctctgggaagcaggtcctggtggggatcacccctgat
ggccaagatgattacagatggtgcttcagggttgatgaagtgaactggtccacgtggaac
actaatctgggcatcatcaacgaggaccctgggtactctggggacctcagacgaaatctc
agtttctccattaagcctggcagagtttcagggaagcactggaaaacattggttccactt
ctaaaagatggagagaagaggagagaagagcctcacaagccaccagaagaagtcaaatta
aaacctgttttggaaccttattttgagccagaagattctgaggagttgaaagagtcaatt
ccaaagtcagcctaa
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