Agelaius tricolor (tricolored blackbird): 139600238
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Entry
139600238 CDS
T10815
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
atrc04040
]
139600238 (TRPC4)
Ion channels [BR:
atrc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
139600238 (TRPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
139600238
NCBI-ProteinID:
XP_071304371
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MAQFYYKRSVNAPYRDRIPLRIVRAESELSHSEKAYLNAVEKGDYASVKKALEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPVLLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMLTCVVIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLSMQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFSKYSGLVPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETNEPGNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKARHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIKWLWRHLCKKKIRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYVAA
MIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLKGSKLSNLQTGKMSKDTASLSENEEN
SESEGNKKGKKKPFSLFDITTMIHPRSASIASEGHNVSNGSAMMVSESTQEKQKRVNFVT
DIKNFGLFHRRSKTNSVEQSKNKIYTVSEEVSRQQAEEQCEKTDELEEGELIMNCELNFQ
NPGKKCVLAESQNTSESLDSHEEGSICPSETEKMELQSSEPATPQDQLGKALDISIDSDG
KQETIVQGDYVITRL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcccagttctactacaaaagaagcgtcaatgctccctacagagaccgaatccctctt
cgcattgtgcgggcagaatctgaactgtctcattcagagaaggcctacctgaatgctgtg
gagaaaggagattatgccagtgtaaagaaagccttggaggaggcagaaatttatttcaag
atcaatattaactgcattgatcccctgggcagaactgcactcctaattgcaattgaaaat
gagaaccttgagctcattgagctgctcttaagttttaacgtgtatgtgggagatgctctg
ttgcatgccatacggaaggaggtggttggagctgtggagctgctgttaaatcacaagaaa
cccagtggagagaagcaggtgccaccagtgcttctggacaagcagttttcagaatttaca
ccggatatcacacctattattctggctgcccacaccaacaattatgaaatcataaagctc
ctggtgcagaagggggtgtctgtgcccaggccacacgaggtgcgctgtaactgtgtcgaa
tgtgtctcaagctcagatgtggacagcctccgccactctcgctccagactcaatatctac
aaggctctggcgagcccatcattgattgctttatccagtgaggatcctttccttactgct
tttcaactgagctgggagctgcaggaactgagtaaagtcgaaaatgagtttaagtcagag
tatgaggaactgtcacggcaatgcaagcaatttgcaaaagatctcctggatcagacacgg
agttccagggaattggaaattattcttaattacagagatgataatagcttgatagaagaa
caaagtggtaatgatcttgcaagattgaaactggcaattaagtaccgtcaaaaagagttt
gttgctcagcccaactgccagcagctgctcgcatcccgctggtacgacgagttccctgga
tggcggaggcgacactgggcagtgaagatgttgacatgtgttgtgataggactccttttc
ccagtcttctctgtgtgctacctgatagctcccaaaagcccattggggctgttcatcaga
aagccatttatcaaatttatctgccatacagcatcatacttgacttttctgttcctgctg
ctgcttgcctctcagcacatcgacaggtcagacctcagcatgcagggaccccctccaacc
atcgtcgagtggatgattttaccgtgggtcctgggttttatctggggtgaaattaaacag
atgtgggatggtggactacaggactacattcatgattggtggaacctcatggattttgta
atgaactccttgtacttggcaacaatctccttgaaaatcgttgcattttcaaagtacagt
gggttagttccacgggagagctgggacatgtggcatccaaccctggtggctgaggccctg
tttgcaatcgcaaacatcttcagctccctgcgcttgatctcattattcactgcaaattct
cacctgggacctctgcagatatctctaggaagaatgttgctggacattttgaagtttctc
ttcatatactgccttgtgctgcttgcttttgcaaatggattgaaccagctgtacttctac
tatgagacaaatgaacctggcaactgcaaaggaatacgatgtgaaaagcagaataatgca
ttttcaacgttatttgaaacgctgcagtcattattctggtctatatttggactcatcaat
ctctatgtgaccaatgtgaaagcaaggcatgaattcactgaatttgttggggccaccatg
tttggtacctataatgtaatatctctggttgttctactcaacatgctaatagccatgatg
aataactcttaccaactcattgctgatcatgcagacattgagtggaagtttgctcgaaca
aaactctggatgagttactttgaagaaggaggaactttgcccactccttttaatgtcata
ccaagcccaaagtctttgtggtatctgatcaaatggttatggagacacctttgcaagaaa
aaaattagaagaaagcctgaaagttttggaacaatagggagacgtgcagctgacaatttg
cggagacatcatcaataccaggaagttatgagaaatctggttaaaaggtatgttgcagca
atgataagagatgccaaaactgaggaaggattgacagaagaaaattttaaggagttaaaa
caagatatttccagctttcgctttgaagtcctgggtttattaaaaggaagcaagctgtct
aatttgcagactggaaagatgagcaaagacactgcctctctgtcagaaaatgaagaaaat
agtgagagtgaaggaaacaagaaaggaaagaagaaacccttcagcctttttgacataaca
acgatgattcacccacgatcagccagtatcgcctctgaaggacataatgtaagcaatggc
tcagcaatgatggtgtcagagtccactcaggagaaacaaaagcgtgtgaattttgtaaca
gacataaaaaattttgggttgtttcacagacgatcaaaaacaaactctgtggagcagagt
aaaaataaaatatacaccgtttctgaagaagtttcccgccaacaggcagaagaacaatgt
gagaaaactgatgaactggaagagggagaattgatcatgaactgtgaattaaacttccaa
aatcctggcaaaaaatgtgtgttagctgagtcacaaaataccagcgagtctttggattca
cacgaagaggggagtatttgtccttcagaaacagagaaaatggagttacagagctcagaa
cctgccactccacaggatcagctgggcaaggctttggacattagcattgactctgatggg
aaacaggaaacaattgttcagggggactatgtgataacgaggttgtga
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