Agelaius tricolor (tricolored blackbird): 139600318
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Entry
139600318 CDS
T10815
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139600318 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atrc03019
]
139600318 (EXOSC8)
Messenger RNA biogenesis [BR:
atrc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
139600318 (EXOSC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
139600318
NCBI-ProteinID:
XP_071304534
LinkDB
All DBs
Position
Unknown
AA seq
276 aa
AA seq
DB search
MAAAFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSITTADGSALVKLGNTTVIC
GVKAELAAPAVDSANKGYIVPNVELPSLCAERFRSGPPGEEAQAASQFIADVIENSQMIV
KEDLCIANGKLAWVLYCDIICLDYDGNLLDASVFALLAALKNVQLPLVTINEESGLSEVN
LKQKNPLIIRKHPVATSFAIFDDTLLIVDPTAEEEDLATGTVTIVTDEEGRLCSVHKPGG
SPLTGAKLQDCITRAITRHKEVKKLIDKVIKSITPK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgttcaaaactgtggaaccattggaatattacaggaggtttttgaaagag
aactgtcgacctgatggaagagagttaggtgaatttcggacaaccactgtcaacataggt
tcaattacaactgcagatggttctgccctggtgaagttaggaaataccacagtgatttgc
ggagtaaaagcggaacttgctgcacctgcagtggattctgctaataagggatatattgtt
ccaaatgtggagctgccatccctctgtgcagagaggtttcgctctggaccacctggtgaa
gaagctcaagcagcgagccagttcatcgcagatgtgattgaaaattcacagatgatagtg
aaagaagatctgtgtattgccaatggcaagcttgcgtgggtcttatactgtgatatcata
tgtctggactatgatggaaaccttctggatgccagtgtctttgctttgttggcagcatta
aaaaatgtgcaattgccgttggttacgataaatgaagaaagtggtttatcagaagttaat
ttaaaacagaagaatcctttgattatcagaaagcatccggttgccacatcatttgctata
tttgatgacacattactcattgttgatccaactgctgaagaagaagatttagcaactgga
acagtaaccattgtaactgatgaagaaggcagactgtgttctgtccataaaccaggtgga
agtcctcttacaggagccaagcttcaggactgtatcaccagagcaattacaagacacaaa
gaagtaaagaagctcatagacaaagtaataaaaagtataacacccaagtga
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