Agelaius tricolor (tricolored blackbird): 139600343
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Entry
139600343 CDS
T10815
Symbol
ZC3H13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atrc03019
]
139600343 (ZC3H13)
Messenger RNA biogenesis [BR:
atrc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
139600343 (ZC3H13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
zf-CCCH_4
zf-CCCH_PAN3
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
139600343
NCBI-ProteinID:
XP_071304584
LinkDB
All DBs
Position
Unknown
AA seq
1646 aa
AA seq
DB search
MSKIRRKVTVENTKTISDSTSRRPSVFERLGPSTGSTAETQCRNWLKTGNCLYGNTCRFV
HGPSPRGKGYSSSYRRSPERPTGDLRERMKNKRQDVEAEPQKRSTEESSSPVRKESSRGR
HREKEDIKITKERTPESEEENGDWETNREDSDNGDVNYDYDHELSLEMKRQKIQRELMKL
EQENMEKREEIVIKKEISPEVVRSKLSPSPSPRKSSKSPKRRSSPKSSSSASKKDKKAST
VSSPLLEQQRSSKSTQSKKKGPRTPSPPPPVQEETPLGKKHKEKHKAKERSEEKARDVKE
RGRDFERHKEKKEKQRDPSESSRRQKRSPSPADHSGSNSSPSREYSPPAARRKQTSRAPA
KSTTHKHNFSPSRRSASPSGQHHSPISSRHHSSSSQSGSSVQRHSPSPHRKRTPSPSYQR
TASPPARRSSSPYPPHSSSPPQRKRSPSRHRSPARDKGRHDRDRTSQSHDRRHERRDETR
GKREKERETRDDRDYDQEQSTSRDHRDDRESRDGRDRRDTRDTRDRREPRESRDTRDSRD
TRDYSRDTKDSRDQRDSRSTRDSHDYRDRESRDAHKKDDQYQDDLRSYGRSHGREESSRA
ETRNDSRSDSRNESRSDRIGRSRGRGPELSDKGSRGTRGSQADGHSSSGNYHDSWESRSS
YADRDRYDSRDQARDSSFERRHSERDRRDNRERDQRASSPVRHQGRSDDLERDERREERR
VDRSDDRRDERARERERERERDRERERERDREREREKERELERDRARERERDRERDKDRE
RERDRDRDHDREREREREREKEREREREERERERERERDRERERERERGRDRDKERDRQR
DWDDKEKGREERRDKREDIREERGSRDVHEERKSKKRHRNESSPSPRQSPKRRRDHSPDS
DAYNSGDDKNEKHRLLSQVVRPQESRSLSPSHVTEERQSRWKEEERKSDRKESSRRYEEP
EFKDRVSSADKQREQPDASEGSRSRVQENLGHRPSEERDASDRMHDDSKKKSKIQKKATK
KKKDDDSGVERYTNEPATEESQVFSPKKGQKRKNVEKKRKRSKGDSEVSDEEIVPHHKKK
KGPRTPPVTKEELVEAPPEKAVAEAPTKREDTTFSDWSDEDVPERGDIVVPERTTDDSHR
KSHRTRVEKVEAPHVTIEDGPHRKPVDQKRSSSLGSNRSHASSRLRSPSNESAHRSGDDQ
AARKRILHSSSRDRDRDREKKSLEITERKSRIDQLKRGEPSRSTSSDRQDSRSHSSRRSS
PESDRQVHSRSGSFDSRERLQERDRHDHDRERERDRREGRQRDWDRDVDKDWPRSRERDR
LRERERDREKRRELERERDRQLPDPAERERERTLDISSQKESTKHSETKLDRDHEKEFDG
ACRDSAASEKEKTDKDLGPSQGFEDGNEAEKVESLEGGEDEAKTNDVQSLGSGAGEYEPI
SDDELDEILAGDAEKREDQQEDEKMPGKNPVDVIDVDWSSLMPKQPKEPREPGAALLKFT
PGAVMLRVGISKRLAGPELFTKIKETCQRVLEKPKDAENLFEHELGALNMAALRRKEERA
GLLSNLGPCCKALCFRRDSAIRKQLMKNEKGATKQTYTNSAAMDSDLLRLSLRLFKRKTV
CQVPGQEKTEDSKIPQPALQQEVCVT
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaattagaaggaaggtcacagtggaaaataccaagaccatatccgatagcaca
tcccgaagacccagtgtgtttgaaaggcttggacccagcactggaagtactgcagagaca
cagtgccgtaactggctgaagactggcaactgcctctatgggaacacatgtagattcgta
catggcccttcaccacgaggtaaaggctatagcagcagttatagaaggtcaccagaaaga
cccactggagatcttcgggaaagaatgaagaacaaacgtcaagatgttgaggcagagccc
cagaaacgaagtacagaggaatcatcctctcctgttaggaaagagtcctcacgaggaaga
catagagaaaaggaggatatcaaaattacaaaggagcgaacaccagaaagcgaagaggaa
aatggggattgggaaacaaatagagaagactctgataatggagatgttaattatgattat
gatcatgagctgtctttggaaatgaagcgccaaaagattcagagagaactcatgaaattg
gaacaggaaaacatggagaaacgagaggaaatagtaattaaaaaagagatttctccagag
gtggttagatctaaattatcaccatcaccatcaccacgaaagtccagcaaatctccaaaa
cgaagatccagtcccaaatcatcatcttcagctagtaagaaagacaagaaagcatctact
gtctcttcaccacttttggagcagcagaggagttctaaaagtactcagagtaaaaagaaa
ggtcctcgtacccctagccctcctcctccagtacaagaggaaactcccctggggaaaaaa
cacaaggaaaaacataaagcaaaagaacgttcagaagaaaaggcaagggacgtgaaagag
agagggcgtgactttgaaaggcacaaggagaaaaaagagaagcagagggatccgtctgaa
agctcccgtagacagaaacgttctcctagtcctgcagatcactctggcagtaattcttcc
ccttccagggagtactcaccacctgctgcaaggcgaaagcaaacctcccgagctccagcc
aagtcaaccactcacaaacataacttctctccctcgcgcaggtctgcttctccatcaggt
cagcatcattctcccatatcctcgagacatcactcctcgtcctcacagtcaggctcctct
gttcaaagacattctccttccccacaccgcaaaaggactccttctccatcctatcaaagg
acagcctccccgcctgcaaggcggtcatcttccccctatcccccacactcttcctctcca
cctcagaggaagcgaagtccttcgagacaccgctctcctgcaagagacaagggaaggcac
gatcgcgatcggacttcacagtctcatgaccggcgccacgaaaggcgggacgaaacgaga
gggaaaagagaaaaagaaagagaaacaagagatgatcgtgactatgaccaagagcagagt
acctccagggaccacagggatgacagagagtctcgtgatggaagagaccggagggacacg
agagacaccagagatcggcgggagccgcgggaatccagagatactcgagactccagagac
acgcgggattatagcagggacaccaaggacagtcgtgaccagagggactcacgctccaca
cgagactcccatgactacagggacagagagagtcgagatgcccataaaaaggatgaccag
tatcaggatgacttgcgtagctatgggaggtcccatggcagagaggagagctctcgtgct
gaaacgaggaatgactccagaagtgactccagaaatgagagcagaagtgatagaattggc
agaagtcgaggccgaggtccagaattatctgacaaaggaagtcgggggactagaggatcc
caggctgatggtcacagcagtagtgggaactaccacgacagctgggaatcgaggagtagc
tacgctgatcgggatcgctatgacagtcgggatcaagcaagggactcctcctttgagaga
agacacagtgaacgggataggcgtgacaacagagaaagagatcagagagcaagctcacca
gtacggcaccaaggacggagtgatgatctcgagcgggatgagaggagagaggagcgaagg
gttgatcggtctgatgacaggagagatgaaagggcccgggagagagagcgggaaagggag
agggaccgagagagagaaagagaaagagaccgggaaagagagagggagaaagagagagag
ttggaacgagatcgtgctcgggaacgggagagggacagagagcgggacaaagacagggag
cgtgagcgggaccgagacagagaccacgacagggaaagggaacgagagagggagagggag
aaggagcgggagcgagagcgggaggaacgagaaagggagcgagaacgagagagagatcgg
gagcgggagcgcgaaagggagagaggtcgagacagagacaaagagagagaccgccagaga
gactgggacgacaaagaaaaaggaagggaagaacgcagggataagagagaagatattcga
gaagaaagaggctcaagagatgtccatgaggaaagaaaatccaagaagcgtcacagaaat
gaaagcagtccaagtccccgtcaatcacccaaacgtcgtcgtgatcattctcctgatagt
gatgcctacaacagtggagatgataaaaatgaaaagcacagactcctgagccaggttgtg
cggccgcaggaatcccggtcactgagcccctctcacgtcacggaggagcggcagagtcgc
tggaaagaagaagagcgaaaatcggacagaaaggaaagttcccgacgctatgaagaacca
gagtttaaagacagggtttcttcagcagataagcaaagagagcagccagatgcttcagaa
ggttcccggtccagggttcaggaaaatcttggacaccgtccttctgaagaaagggatgct
tctgatagaatgcatgatgacagcaagaagaaatctaagatacagaaaaaggccacaaag
aagaagaaagatgatgacagtggggtggaaaggtacactaatgaaccagcaactgaggaa
agccaggtcttttcccctaagaaaggtcaaaaaaggaaaaatgtggagaaaaagcggaag
agatctaagggtgattctgaagtttccgatgaagaaattgttccacatcataaaaagaaa
aaaggcccaagaacccctcctgtaactaaagaagaactggttgaagcaccacctgagaaa
gcagtggcagaagcccccacgaagagagaagatacaacatttagtgactggtcagatgaa
gatgttcctgaacgtggtgacattgttgttccagaaagaaccactgacgattcccacaga
aaaagtcacaggacgagggtagaaaaggtggaagcccctcatgttactatagaggatgga
ccacaccgtaagcctgtggaccagaagcgcagcagcagcctcggcagcaatcggagccat
gcctccagtaggctcagatccccctccaatgagtcagcgcatcgcagtggagacgatcag
gctgcacggaagaggatcctgcacagtagctctagggatagggatagggacagggagaag
aagagcttagaaatcactgaaaggaagtcccgaattgatcagctgaaacgaggggaaccc
agtcgcagcacatcttcagatcgtcaagattcaagaagccacagctcaagaagaagttcc
cctgagtcagatcgtcaggttcattccagatccgggtcctttgatagcagggaaaggctc
caggagcgagatcgacatgaccacgatcgagaacgagagagagacaggagagaggggaga
caaagggactgggaccgagatgtggacaaggactggccaaggagccgggagcgagacaga
ctcagggagcgagagagggatagggagaaaagacgggagctggagagagagagggaccga
cagctgcctgatcctgctgaaagggagagagagagaactcttgacatctcctctcaaaag
gaatcaacaaagcacagtgaaacaaaactggacagggatcacgaaaaggagtttgatggt
gcttgccgggactcagcagcttcagagaaggagaaaacagacaaagatttaggaccttca
caaggctttgaagatggaaatgaggccgaaaaggtagagagtctagaaggaggagaggat
gaggcaaagactaatgatgtgcagtcactggggtctggtgctggagaatacgagcctatc
agtgatgatgaactggatgaaattctggcaggtgatgctgaaaagcgtgaggatcaacag
gaggatgagaagatgcctggtaaaaatccagtggatgttatagatgtagactggtccagt
cttatgccaaagcagccaaaagaaccacgtgagcctggggctgcgctcttaaaattcaca
ccaggtgctgttatgttgagagttggcatttccaagcgattggctggaccagaactcttc
accaaaataaaagagacgtgccagagagtgttggaaaaacctaaagatgcagaaaacctt
tttgagcacgaactgggagcactgaacatggctgcacttcggcggaaagaagagagagca
ggtcttctcagcaatctgggtccttgctgcaaagcgctctgcttccgccgggactctgca
attcggaagcagctcatgaagaatgaaaagggtgcaacaaaacaaacttacacaaattct
gcagcaatggacagcgacttgttacggttgagtctacggttattcaaacgaaagactgtg
tgccaggttcctgggcaggaaaagacagaggacagcaaaattccacagccagctctccag
caggaagtgtgtgtgacttga
DBGET
integrated database retrieval system
