Agelaius tricolor (tricolored blackbird): 139600370
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Entry
139600370 CDS
T10815
Symbol
PCDH17
Name
(RefSeq) protocadherin-17 isoform X1
KO
K16499
protocadherin delta 2
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
atrc04515
]
139600370 (PCDH17)
Cell adhesion molecules [BR:
atrc04515
]
Cadherins
Protocadherins
139600370 (PCDH17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
139600370
NCBI-ProteinID:
XP_071304634
LinkDB
All DBs
Position
Unknown
AA seq
1205 aa
AA seq
DB search
MYLSICCFFFCWAPALSLKNLNYSVPEEQGAGTVIGNIGRDARLAAGAPGGGMLPAERGV
PGGGPGGGRGPKSTFRVLENSAPHLLDVDGESGLLYTKQRIDREALCRRSAKCQLSLEVF
ANDQEICMIKVEIQDLNDNAPSFPSDQVDMDISENAAPGTRFPLTSAHDPDAGDNGLRTY
LLTRDDYGLFSLDVKSRGDGTKFPELVIQKPLDREEQSHHTLVLTALDGGDPPRSGTVQI
NVRLIDSNDNSPIFEAASYVVELPENAPLGTAVIDLNATDADEGTNGEVLYSFSGYAPER
VRDLFSIDPQSGLIRVKGNLDYEESGLIEIDVQARDLGPNPIPAHCKVTVRLIDRNDNAP
TIGFVSVRQGALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGGPGAVPFTLEENY
DNFYTVVTDRPLDRETQDEYNVTIVARDGGNPPLNSTKSFSVRILDENDNPPRFSKNLYV
LQVPENNIPGEYLGSVLAQDPDLGQNGTVSYSILPGHVGDVSIYTYVSVNPTNGAIYALR
SFNYEQTKHFEFRVLAKDSGSPHRESNATVRVTVLDVNDNAPLIVLPALINDTAELQVPR
NAGVGYPVGTVRALDSDFGESGRLTYEIVEGNEEHLFEMDPTSGEIRTLHPYWEELSPVA
ELVVKVSDHGKPSLSAVAKLIVRALAGPLPEAGEPQVNGEQHRRPHWDLSLPLIVTLSTV
SIILLAAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGGGSGGGGGGSGSGGGKGKKK
KISKNDIMLVPSEGEDSRGPLNVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPA
SNNLTVPQGHVGCHTSFTGQGTNASEAPPSRMSIIQTDNFPAEPNYMGSRQQFVQSSSTF
KDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSVREALKMKTTSTKSQPLEQEQQGRGQ
RPIVGICGPARCEDGKFSEQEECVNCTDECRVLGHSDRCWMPQFPAASQAENADYRTNLF
VPTVEANVETETYETVNPTGKKTFCTFGKDKREHTILIANVKPYLKAKRALSPLLQEVPS
ASSSPTKTCIEPCTSTKGPLDGCEVKSGALAEPSSQYLSTDSQYLSPSKQSKDSSFIASD
QMARAFADVHSRVSRDSSEMDSVLEQLDRSARDLGRESVDAEEVVREIDKLLQDCRGSDP
VAIRK
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttccatttgttgcttcttcttctgctgggctcccgccctatcgctgaagaac
ctgaattactcggtgccggaggagcagggagcgggcacggtcatcgggaacatcgggcgc
gatgcgcggctggcggcaggcgcgccgggaggcgggatgctgcccgcggagcgtggcgtt
cccggcggcggccccgggggcggccgcggccccaagtccaccttccgggtgctggagaat
tcagccccgcacctcctggacgtggacggggagagcgggctgctctacaccaagcagcgc
attgaccgtgaggcgctgtgccggcgcagtgccaagtgccagctgtccctcgaggtgttc
gctaatgaccaggagatctgcatgatcaaagtggagattcaggacctgaatgacaacgca
ccatcattcccctctgaccaagtggacatggacatctctgaaaatgctgcaccaggcacc
cgcttccccctcaccagcgcccacgacccagacgctggggacaatggtctgcgcacctac
cttctcactcgtgacgactacggcctcttctccctcgatgtgaagtcccgtggtgatggc
acaaagtttccagagctggtcatccagaagccattagaccgtgaggagcagagtcaccac
accctggtgctgacggcattggatggtggtgacccaccacgctcaggcacggtgcagatc
aatgtgcgcctcattgactccaatgacaacagccccatctttgaggcagcctcctatgtg
gtagagctgccagagaacgcgccactaggcacggcagtcatcgacctcaacgccactgat
gccgatgagggtaccaatggagaggtgctctactccttcagtggctacgcacctgagcgc
gtccgtgacctgtttagcatcgacccacagagcggcctcatccgtgtcaagggtaacctg
gactatgaggagagtggcctcattgagattgatgtccaagctcgggacctggggccaaat
cccatccctgctcactgcaaggtcactgtccgcctcatcgaccgcaacgacaatgctccc
accattggctttgtctccgttcgccagggagctctgagtgaggctgccccaccaggcact
gtcattgctctggtgcgggtcaccgaccgtgactcaggcaagaacgggcagctccagtgc
cgggtgctgggcggtggcggcgggcctggtgccgttcctttcaccctggaggagaactat
gacaacttctacactgtggtcactgaccgacccctggaccgtgagacgcaggatgagtac
aatgtgaccatcgtggcacgtgatgggggcaatcccccacttaactccaccaagtcattt
tctgtccggatccttgacgagaatgacaacccaccccgcttcagcaagaatctttatgtg
ttgcaggtgcctgagaacaacatccctggagagtacctgggctcagtcttggcccaggat
cctgacttgggccaaaatgggacagtgtcttactccattctgcctgggcatgtgggagat
gtctccatctacacctatgtctctgtcaaccccacaaatggtgctatttacgctctgagg
agcttcaattatgagcagacaaagcactttgagttccgcgtgctggccaaagactcgggt
tcaccccaccgtgaaagcaatgccacagtgcgcgtcaccgtgctcgatgtcaacgataat
gcacccctcatcgtcctgcctgccctcattaatgacactgctgagctgcaggtgccacgc
aatgctggggtgggctaccccgtgggcaccgtccgcgccctggacagtgactttggggag
agtgggcgcctcacgtatgagattgtggaaggcaatgaggagcacctctttgagatggac
cccaccagtggtgagatacgcaccttgcacccctactgggaggagctcagccctgtggct
gaactggtggtaaaagtcagtgaccatggcaagcccagcctctccgctgtggccaagctc
atagtcagggccttggcggggcccctgcccgaggctggcgagccgcaggtgaacggcgag
cagcatcggcggccgcactgggacttgtcgctgccgctgattgtgacactgagcactgtc
tccatcatcttgctggctgccatgatcactattgctgtgaagtgcaagcgagagaacaag
gagatccgcacctataattgtcgcattgccgagtatagccaccctcagctgggaggaggg
ggaggcagtggcgggggaggaggaggcagtggcagtggagggggcaagggcaagaagaag
aagatcagcaagaatgacattatgctggtgcccagtgagggcgaggacagccggggtccc
ctcaatgtcatgaacgtggtgagcagcccatccctggccacctcacccatgtactttgac
taccagacccgcctgcccctcagctctcccaggtctgaggtgatgtacctgaagcccgcc
tccaacaacctgactgtaccccagggacatgtgggctgccacaccagcttcacagggcaa
gggactaacgccagcgaggctcccccgagccggatgtccataattcagacagacaatttt
cccgcagagcccaattacatgggcagcaggcagcagtttgttcaaagtagctccacgttc
aaggatccagaaagagccagcttgagggacagcgggcatggggacagtgatcaggctgac
agtgaccaagacactaacaaaggctcctgctgtgacatgtctgttagggaggcactcaag
atgaaaactacttcaactaaaagccagccacttgaacaagaacagcaaggcagaggccaa
agacccattgttgggatctgtggaccagcccgctgtgaggatggaaaattttcagaacaa
gaagaatgtgttaactgcacagatgaatgcagagtgcttggtcattctgacaggtgttgg
atgccacagttccctgcagccagtcaggctgagaatgcagattatcgcacaaatctcttt
gtacccacagttgaagctaacgttgagactgagacatatgaaactgtgaatcccactggg
aaaaagactttttgtacatttgggaaagacaagagagagcacactattctcattgccaat
gttaaaccttacttaaaagccaaacgtgccctgagtcctctgcttcaggaggttccctca
gcatcgagcagcccaaccaagacatgcattgagccttgcacctcaacaaaaggaccactg
gatggttgtgaagtgaaatcaggagccttggctgaaccaagcagccagtacttgtcaact
gacagtcagtatctatcgcccagtaaacagtcaaaggactcttccttcattgcatcagat
cagatggctagggcctttgcagacgtgcactcccgagtgagccgagactccagtgagatg
gactctgttctggagcagttagaccgttcagcccgggatctaggcagggagtcggtggat
gccgaggaagttgtgagagaaatagacaagctcttgcaggactgtcggggaagtgaccct
gtggccatcagaaagtga
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