Agelaius tricolor (tricolored blackbird): 139600839
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Entry
139600839 CDS
T10815
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04120
Ubiquitin mediated proteolysis
atrc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139600839 (UBE4B)
04120 Ubiquitin mediated proteolysis
139600839 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atrc04121
]
139600839 (UBE4B)
Enzymes [BR:
atrc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139600839 (UBE4B)
Ubiquitin system [BR:
atrc04121
]
Ubiquitin ligases (E3)
U-box type E3
139600839 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
139600839
NCBI-ProteinID:
XP_071305450
LinkDB
All DBs
Position
Unknown
AA seq
1309 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGSSSQPTTPLTSPQRETPPGPPGAAPAPGPSHSLGLNVHSM
TPATSPIGAAGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLTDKEPLSGSEVSEEQALQLVCKIFRVSWKDRDRDVIFL
NSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQARDENPFASLTATSQPIAAAARSPD
RSLMLNMGSNPGSSPMFCNVGSFGSSSLSSLYGTSPAPPTNFTSYVPMTGSSLTPPASSV
ATPAVAPISVSSQLAAASPSWTQPCSPRYHPYTVAHPGGSAAAAAARSPSVSIPCSSPSP
PALAAGPPAMPVITSRHRPTAMGPPLFTASPGALRRRPSLQSRIPPSVGGSGSSSVSDSC
SDHFTIENCKETEMLNYLIECFDRVGIEERKAPKMCSQPTVSQLLSNIRSQCISHAALVL
QGSLTQPRSLQQQSLLVPYMLCRNLPFGFIQELVRTTYQDEEVFKQIFIPILQGLAVASK
ECSLDSDNFKYPLMALCELCEIKFGKTHPMCSLVVSLPLWLPKSLSPGAGRELQRLSYLG
AFFSLSVFAEDDNKVVEKYFSGPAITLENTRVVSQSLQHYLELARQELFKILHSVLLNGD
TREAALSYMAAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPMYIF
HPRCRIELPTDETRVKATMEEVAAWIAELYRDPSLFSEPKFPTECFFLTLHAHHLSILPS
CRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADA
GLLDENFLRRCLNFYGMVIQLMLRILDPAYPNIKLPLTPEVPKVFASLPEFYVEDVAEFL
FFIVQYAPQVLYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKF
FEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGT
FMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDLLPRDQQQAR
QSQLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPK
CRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRK
AGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTI
MDRSIILRHLLNSSTDPFNRQTLTENMLEPVPELKEQIQAWMRDKQNDH
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgcggacgagatccggcggaggcgcctggcgcggctggcgggcggc
tcctcgtcccagcccaccaccccgctgacgtcccctcagagagagaccccgccggggccg
ccgggcgcagccccagcgccggggccctcgcacagcctgggcctcaacgtgcacagcatg
accccagctacctctcccattggggcggcaggagtagcccaccgaagccagagcagcgaa
ggagtgagttccctcagcagttctccatcaaacagccttgaaacccaatctcagtccctc
tctcggtctcagagcatggacattgatagtgtctcctgtgagaaaagtatgtcccaggta
gatgtggattcaggaattgagaacatggaggtggatgagaacgatcgcagagagaagcgg
agtctgacggacaaggaacctctgtcagggtcagaagtgtcagaggaacaagctctacag
ctggtctgtaagatcttccgagtctcttggaaggacagagacagagatgttattttcctg
aattcactctctgcccagttcaagcagaacccaaaggaagtgttttcagattttaaggac
ttgatcgggcaaattttgatggaagtgctgatgatgtccacccaggcaagggatgagaac
ccctttgccagcctgacagccacctcccagcccattgctgcagctgcccgctctcctgac
agaagcctgatgttaaatatgggctccaaccctggaagcagccccatgttctgtaatgtg
ggctcctttggttccagctcgttgtccagtctctatgggactagtccagctcctcctacc
aatttcacaagctatgtaccaatgactggttcatctcttaccccaccagccagttcagtt
gccaccccagcagtggctcccatttctgtcagctctcagctggcagcagccagcccctcg
tggacacagccttgctccccgcggtaccacccctacaccgtggcccatcccggaggctct
gctgccgctgccgccgcgcgctccccgagcgtttccatcccatgtagctctccaagccct
ccagccctggctgctggccctccagccatgccagtcatcacatccaggcacaggcccaca
gccatgggcccacctttgtttactgcttcgcccggtgccttgcgcaggcgtccttcctta
cagagcaggattcctcctagtgtgggaggctctggcagctcgagtgtttccgattcctgc
agcgaccacttcaccattgaaaactgtaaggagacagagatgctgaactacctcattgag
tgttttgacagggttggaatagaggagagaaaagcaccaaagatgtgtagccagccaaca
gttagccagttactgagcaacatcagatcccaatgcatttcacacgctgctttggtgcta
cagggatccttaactcaaccaaggtcattgcagcagcagtctctgctggtaccatatatg
ctgtgtaggaatctcccatttggcttcattcaagaattggtgagaacaacttaccaggat
gaagaggtgttcaaacagatctttattcccatcttacaaggcctggctgtggcttccaaa
gagtgctccctcgatagtgacaatttcaaatatccccttatggcactatgtgaactctgt
gaaatcaagtttgggaaaacgcaccccatgtgcagtttggttgtctctttgcccttgtgg
ttgcctaaatctttaagcccaggtgcaggaagagaactgcaaagactttcctaccttgga
gccttcttcagtctgtctgtctttgctgaggatgataacaaagtagttgaaaagtacttc
tcagggcctgccattactcttgagaacacccgggttgttagccagtccttgcaacattac
ctggaactagcaaggcaagagctgttcaagatcctgcacagtgtcctgctcaacggggac
acccgggaggcagctctcagctacatggcagctgtggtcaatgccaacatgaaaaaggcc
caaatgcagaccgacgatcgcttggtgtccacagacggcttcatgctcaacttcctctgg
gtactgcagcagctgagtacgaagataaagctggaaacggttgatcccatgtacatattc
catcccaggtgtcgaatcgagcttcccacagatgagacaagagtgaaagcaacgatggag
gaggttgcagcctggattgctgaactttacagggacccgtctctgttttctgagccgaaa
ttcccaacggaatgtttcttcctcaccctgcacgcgcaccacctgtccatcctgcccagc
tgccgccgctacatccgcaggctgcgagccatcagggagctcaacaggactgttgaagat
ttgaaaaacaacgaaagtcagtggaaggattctcctctggccaccaggcatcgagagatg
ctcaaacggtgcaagacacagctcaagaaactggtgaggtgtaaggcttgtgcagatgct
ggtttgctggatgaaaacttcctcaggaggtgcctgaatttctatggcatggtgatccag
ctgatgcttcgcattcttgaccctgcctatcccaacataaaattgcctttaactcctgag
gttccgaaagtatttgcatcattgccagagttttacgtggaagatgttgctgaattttta
ttttttattgtacaatatgctcctcaggtgctgtatgagccctgtactcaggacatagtg
atgttcctcgttgtgatgctgtgcaaccagaactacatccgaaatccttatttagtagcc
aagctggtggaagtgatgttcatgacaaatccagctgttcagccccgcacacagaagttc
tttgaaatgattgagaatcaccctctctccactaaattgttagtcccctccttgatgaag
ttttacacagatgtggaacataccggagccactagcgagttctatgacaagtttacaatc
cgctaccacatcagcaccattttcaaaagcctctggcagaatatagctcaccatggtaca
tttatggaagagttcaactctgggaagcagtttgttcgctacatcaacatgctgataaat
gacacaactttcttgctggatgagagtctggagtctctaaaacgtatccatgaagtgcaa
gaggagatgaagaataaagagcaatgggacctgctgcccagggatcagcagcaggcccgg
cagtcgcagctggctcaggatgagcgcgtgtcccgttcatatcttgccctggcaacagaa
actgttgatatgttccatatccttaccaagcaggtccaaaagccttttctcagacctgaa
cttggaccacgactggctgctatgttgaactttaacttacagcaactgtgtggccccaag
tgccgtgacctgaaagttgaaaacccagagaaatacgggtttgaaccaaagaagctgttg
gaccaactgactgacatttatctgcagctggattgtgctcgctttgctaaggcaattgct
gatgatcagaggtcctacagtaaagagctctttgaggaggttatctccaagatgaggaag
gctggcatcaagtctaccatagcaatagagaaattcaaactgctggcagagaaagtggag
gaaattgttgccaagaatgcccgtgcagagattgattacagcgatgctccggatgaattc
agagatcccctgatggacactctgatgaccgaccccgtgaggctgccctcaggaacgatc
atggacaggtcaatcatcctgaggcacctgctcaactcctccactgaccccttcaaccgt
cagacgctgacggagaatatgctggaaccagtgccagaacttaaagagcaaatccaagcc
tggatgagagacaagcagaatgaccattga
DBGET
integrated database retrieval system
