Agelaius tricolor (tricolored blackbird): 139600866
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Entry
139600866 CDS
T10815
Symbol
DDX6
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03018
RNA degradation
Brite
Enzymes [BR:
atrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139600866 (DDX6)
Messenger RNA biogenesis [BR:
atrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
139600866 (DDX6)
mRNA degradation factors
5'-3' decay
Decapping complex
139600866 (DDX6)
Chromosome and associated proteins [BR:
atrc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
139600866 (DDX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139600866
NCBI-ProteinID:
XP_071305523
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MSTARTENPVIMGLSSQNGQLRGPVKPSGGPGGGGTQTQQQMNQLKNASTINNGTQQQAQ
SMTTAIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPS
PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQV
SQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVEHV
QMIVLDEANKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL
MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYS
CFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLH
RIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVED
EKQ
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggccagaacagagaaccctgttataatgggtctatccagtcagaatgggcag
ttgagaggccctgtaaaacccagcgggggcccaggaggtggaggcacacaaactcagcaa
cagatgaaccagctgaaaaatgccagcacaatcaataatggcactcaacagcaagcacag
agtatgaccaccgctattaaacctggtgatgactggaagaagactttaaaactccctcca
aaggatttgagaatcaaaacttcggacgtgacctccacaaaaggaaatgagtttgaagat
tactgtttgaaacgggagttgctgatgggaatttttgaaatgggctgggaaaaaccatct
cctattcaggaggagagcatccccattgctttatctggtagggatatcttggctagagca
aaaaatggaacaggcaagagtggagcctacctcattcctttacttgaacggctagactta
aagaaggacaatatacaagcaatggtgattgttcccacccgtgaactagccctgcaggtc
agtcaaatctgtatccaagtcagcaagcacatgggaggtgccaaagtgatggcaacaacg
ggaggaaccaatttgcgagatgacataatgagacttgatgatacagtgcatgtggtgata
gctacccctgggagaattctcgatctcatcaagaaaggagtagcaaaagttgagcatgtc
cagatgatagtattggatgaggcaaataagttgctgtctcaagattttgttcaaataatg
gaagacataatcctcacgctacctaaaaacagacagattttgctctactcagccactttt
cctttgagtgtgcagaagttcatgaattcccatttgcagaaaccctatgagataaatttg
atggaggagctgaccttgaagggagttactcagtactatgcctatgtcactgagcgtcag
aaagtgcactgcctcaatacactcttttccaggctccagattaaccagtcgatcattttc
tgcaactcctctcaacgggttgaattgctagccaaaaagatctcccaactgggctattcc
tgcttttatatccatgctaaaatgaggcaggagcaccgcaatcgtgtattccatgatttc
cgaaatggcttgtgccgcaatctcgtttgcactgatctgtttacccgaggtattgatatc
caggctgtgaatgtggtgataaattttgatttcccaaagctggcagaaacttatcttcat
cgcattggcagatcaggtcgctttggtcatcttggcctggccatcaacttaatcacctat
gatgatcgattcaacctgaaaagtattgaggagcagttgggaactgaaattaaacccata
ccaagcaacatcgacaagagcttgtatgtggcagaataccacagtgaacctgtagaagat
gagaaacagtaa
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