Agelaius tricolor (tricolored blackbird): 139600916
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Entry
139600916 CDS
T10815
Symbol
DSCAML1
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
atrc04515
]
139600916 (DSCAML1)
Cell adhesion molecules [BR:
atrc04515
]
Immunoglobulin superfamily
Other
139600916 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
V-set_CD47
Receptor_2B4
Interfer-bind
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
139600916
NCBI-ProteinID:
XP_071305595
LinkDB
All DBs
Position
Unknown
AA seq
2046 aa
AA seq
DB search
MWLVTFLLLYSLPKARAEDVGTSLYFVNDSLQQVTFSSTVGVVIPCPAAGSPSAVLRWYL
ATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENSAGKIRSPNIRVKA
VFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPENRFFITSYGG
LYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVSDPAESIPTMLDSFQSREVKAGR
LVELPCIASGYPNPAVRWIKDGRPLPADSRWSKRITGLTISDLRVEDSGTYICEVTNTFG
SAEVTGTLTVIDPLRVTLTPKKLKTGIGSTVILSCALSGSPEYVIRWYRNTDLVAVDDYI
SIRGISNETLLITAAQKSHSGAYQCFATRKSQTAQDFSIITLEDGTPRIVSSFSEKVVNP
GEQFSLMCAAKGAPPPTVTWALDDEPIPRDSGHRSNQYTMSDGTTVSHMNVSSPQIKDGG
VYRCTARNSVGSAEYQARINVRGPPSIRAMKNITAVAGRDTFINCRVIGYPYYSIKWYKD
SLLLPDNHRQVVFENGTLKLMDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVKVPPLIQP
FEFPPASIGQLLYIPCVVSSGDMPIHITWRKDGHVILSGSGVTIESKEFMSSLQISSVSL
KHNGNYTCIASNDAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKV
MWKHAKGSGNPQQYHPIPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSM
FLTVKIPAMITSHPNTTIAIKGQTKELNCTARGERPIIIRWEKGDTVIDPDRNMRYAITT
KDNGDEVISTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKAR
SMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIR
MYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPITSQSIQVTWKAPKKELQNGVIRG
YQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEI
NATTLEDVPSQPPENVRAISITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYMDGEWGE
MQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDIPGPPAGIKAVP
SSASSVVVSWLPPAKPNGIIRKYTIFCSSPGSGQPAPSEYETSPDQLFYRIAHLNRGQQY
LLWVAAVTSAGRGNISEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGEPVPAI
KWTKDSEDSAIPVTVDGHRLIQANGTLVLRSVKAEDSGYYTCTATNTWGFDTIIINLLVQ
VPPDQPRLTVSKTSASSITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFK
LESLKCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQ
GWSSGGCPITAIVLEYRPKGNWVWQSLRTNSSSEVFLTELREATWYELRMKACNSAGCGN
ETAQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIACPVILATLGVALLFIIRKKRKEKRL
KRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKAT
IPVTDTEFSQAVNPQSFCTGVSLHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSAHSTR
NRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVST
ESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTTDNADSMTSMSTP
SEPGICRFTASPPKPQDSERGKGVAVPIPHRASKSDYCNLPLYVKSEAFFRKPDAHEPCP
VVPPREASIRNLARAYHAQARHMTLEPGAKPLGLPPPASAATTLPQRTLPMPGPAGPAPA
PAASAAPAPPVPAEPPVPAGAAAEARVPTHSKVGGSRDSLLEMSTSGVGRSQKQGAGAYS
KSYTLV
NT seq
6141 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggtaacttttctcctgctgtactctttgccgaaagcacgcgctgaagatgtt
ggaaccagcctctactttgtgaacgactccctgcagcaggtgaccttctccagcacagtg
ggggtggtgatcccctgcccggcagcagggtcacccagcgccgtcctccgctggtacctg
gccacaggtgacgacatctatgatgtgccccacatccggcacgtccatgccaatgggact
ttgcagctctaccccttctcgccatcagccttcaacagcttcatccacgacaacgattac
ttctgcaccgcagagaactcggctggcaaaatcaggagccccaacatccgtgttaaagca
gttttcagggagccgtacaccgttcgggtggaggaccaaaggtcgatgcgtggaaacgtg
gctgttttcaagtgcctcatcccctcctcagtgcaggaatacgttagcgttgtgtcctgg
gagaaagacaccgtttctatcatcccagaaaataggttttttattacttcttatggaggt
ttgtacatatcggacgtgcagaaggaagatgccttgtccacctacaggtgtatcaccaag
cacaagtacagcggggagacgcggcagagcaacggcgcccgcctctccgtctcagacccg
gcggagtccatccccaccatgttagacagcttccagtcccgggaggtgaaggcgggccgg
ctggtggagctgccctgcatcgcctcgggctaccccaacccggccgtgcggtggatcaag
gacgggcggccgctccccgccgacagccgctggagcaagcgcatcacggggctgaccatc
agcgacctgcgcgtggaggacagcggcacctacatctgcgaggtgaccaacaccttcggc
tccgcagaggtcacggggaccctcacggtcatagaccctctgcgtgtgaccctcacacca
aagaagctcaaaacgggcatcggcagcaccgtcatcctctcttgtgccctcagcgggtcc
cccgagtacgtcatccgctggtaccgcaacacggacctggtggcggtggatgactacatc
tccatccggggcatcagcaacgagaccctcctcatcacggccgcccagaagagccactcc
ggcgcctaccagtgctttgccacccgcaagtcccagacggcacaggacttctccatcatc
acgctggaggatgggaccccccgcatcgtctcctccttcagcgagaaggtggtcaacccc
ggggagcagttctccctgatgtgtgccgccaagggggccccgccacccaccgtcacctgg
gcgctggacgacgagcccatcccgcgggacagcgggcaccgctccaaccagtacaccatg
tctgatggcaccaccgtcagccacatgaacgtcagcagcccgcagatcaaggacggcggc
gtgtaccggtgcaccgcgcggaactcggtgggcagcgccgaataccaagcgcgaataaac
gtaagaggtcccccgagcatccgtgccatgaagaacataacagcggtcgcgggtagggac
actttcatcaactgcagggtcatcgggtacccctattactccatcaagtggtacaaggac
tccctgctgctgcccgataaccaccgccaagtggtctttgagaacggcacgctgaagctg
atggatgtgcagaaaggcatggatgaaggagagtatctgtgcagcgtgctgatccagccc
cagctctccatcagccagagcgtccacgtcaccgtcaaagtccctcctctgatccagccc
ttcgagttcccgccagcctccatcggacagctcctctacatcccctgcgtggtgtcctcc
ggggacatgcccatccacatcacctggaggaaggacgggcacgtcatcctctctggctct
ggggtcaccatcgagagcaaggagttcatgagctccctgcagatctccagcgtgtccctc
aagcacaacgggaactacacctgcatcgccagcaacgacgctgccaccgtcagccgggag
cggcagctgatcgtgagggtgcctcctcgctttgtggtccaacccaacaaccaagatggc
atctatggaaaagctggggtgctgaactgctccgttgatgggtacccccctcccaaagtc
atgtggaagcacgctaaaggaagtggcaacccccagcagtaccaccccatccccctgacg
ggccgcatccagatcctgcccaacagctccctgctcatccgccacgtgctggaggaggac
atcggctactacctctgccaggccagcaacggcgtgggcacagacatcagcaagtccatg
ttcctcaccgtcaagatcccagccatgatcacctcccaccccaacaccaccatcgccatc
aagggccagaccaaggagctgaactgcacagcgcggggcgagcggcccatcatcatccgc
tgggagaagggggacaccgtcatcgaccccgaccgcaacatgcgctacgccatcaccacc
aaggacaacggcgacgaggtcatctccaccctcaagctgaaaccagccgaccgtggggac
tccgtcttcttctcttgtcatgccatcaactcctacggcgaggacagaggcctgatccag
ctcactgtccaagagccccctgacccgccggagctggagatccgtgaggtgaaagcccgg
agtatgaatttgcggtggacgcagcggttcgatggcaacagcatcatcactggctttgat
atcgagtacaagaacaagtcagattcctgggatttcaagcagtctacacgcaacatctcc
ccgaccatcaaccaggcgaacatcgtggacctgcaccccgcctcggtgtacagcatccgc
atgtactccttcaacaagatcgggcgcagtgagcccagcaaggagctcaccatcagcacc
gaggaagcagctcccgatggccctccaatggatgtcaccttgcagcccatcacatcccag
agcatccaggtcacctggaaggccccgaagaaggagctgcagaacggggtgatccgtggc
taccagatcggctaccgggagaacagcccgggcagcaacgggcagtacagcatcgtggag
atgaaggccacgggggacagcgaggtctacacgctggacaacctcaagaagtttgcgcag
tacggggtggtggtgcaggcgttcaaccgcgcgggcacggggccctcgtccagcgagatc
aacgccaccacgctggaggacgttcccagccagccccccgagaacgtgcgagccatctcc
atcacctcggacgtggccgtgatctcctggtcggagcccccgcgcagcaccctcaacggg
gtgctcaagggctaccgcgtcatcttctggtccctctacatggacggagagtggggtgag
atgcagaacatcacgaccacgcgggagcgagtggagctgcggggcatggagaaattcacc
aactacagcgtgcaggtgctggcctacacccaggcaggtgatggcgtccgcagcagcgtg
ctctacatccagaccaaggaggacattccaggtcccccggctgggatcaaggctgtgccg
tcctctgccagcagcgtggtggtgtcctggctgccgccggccaagcccaacggcatcatt
cggaagtacaccatcttctgctccagccccggctcggggcagccggctcccagcgagtac
gagaccagcccggaccagctcttttaccgcatcgcccacctgaaccggggccagcagtac
ctgctctgggtggccgccgtcacctccgccggccgcggcaacatcagcgagaaggtcacc
atcgagcctgcgggcaaagcccctgccaagatcatctccttcggaggcaccgtcaccacg
ccgtggatgaaggacgtgaggctgccgtgcaactccgtcggggagcctgtgcccgccatc
aagtggaccaaggacagcgaggactctgccatcccggtgacggtggacgggcaccgcctg
atccaggccaacgggacgctggtgctgcgctcggtgaaggccgaggactccggctactac
acctgcactgccaccaacacctggggcttcgacaccatcatcatcaacctgctggtgcaa
gtgcccccagaccagccccgcctgaccgtctccaagacctcggcatcgtccatcacgctg
gcctggatccccggggacaatgggggcagctccatccgaggctttgtgctccagtactcg
gtggacaacagcgaggagtggaaggacgtgttcatcagctcctcggagcgctccttcaag
ctggagagcctcaagtgtggcacgtggtacaaggtgaagctggcggccaagaacagcgtt
ggcgccggccgcatcagcgagatcatcgaggccaagacccacggcagagagccctccttc
agcaaggaccagcacctcttcacccacatcaactccacgcacgccaggctgaacctgcag
ggctggagcagcgggggctgccccatcaccgccatcgtcctggagtaccggcccaagggc
aactgggtgtggcagagcctccgcaccaacagctccagcgaggtgttcctgaccgagctg
cgcgaggccacctggtacgagctgcgcatgaaggcctgcaacagcgccggctgcggcaac
gagaccgcgcagttcgccacgctggactacgacggcagcaccatccccccgatcaagtct
gcccaaggggaaggggatgatgtgaagaagctcttcaccatcgcctgccccgtgatcctg
gccacgctgggagtggccctgctcttcatcatccgcaagaagaggaaggagaagcggctg
aagaggcttcgagatgcaaagagtttggcagaaatgctgatcagcaagaataaccgcagc
tttgacacgccggtgaaggggcccccgcagggcccccgcctgcacatcgacatcccgcgg
gtgcagctcctcatcgaggacaaggagggcatcaagcagctgggggatgacaaagccaca
atcccggtgaccgacacggagttcagccaggcagtgaacccccagagcttctgcacgggc
gtctctctgcatcacccagccctgatccagaacacagggcccctcatcgacatgtctgac
atccgccctggcaccaaccccgtgtcgaggaagagtgtgaagtctgcgcacagcacccgt
aaccggtactccagccagtggacactcaccaagtgccaggcgtccacccctgcacggacc
ctcacctcggactggaggacagtgggctcccagcatggcatcacggtcactgagagtgac
agctacagtgccagcctctcgcaggacacggacaaggggcggaacagcatggtgtccacg
gagagcgcctcgtccacctacgaggagctggcgcgcgcctacgagcacgccaagctggag
gagcagctgcagcacgccaagttcgagatcaccgagtgcttcatctccgacagctcctcg
gaccagatgaccacgggcaccacagacaacgccgacagcatgacctccatgagcaccccg
tccgagcccggcatctgccgcttcaccgcctccccgcccaagccccaggacagcgagcgg
ggcaagggcgtggccgtgcccatcccgcaccgcgccagcaagagtgactactgcaacctc
ccgctgtacgtcaagtcggaggccttcttccgcaagcccgacgcgcacgagccgtgcccg
gtggtgccgccgcgggaagcctccatccgcaacctggcgcgggcgtaccacgcgcaggcc
cggcacatgacgctggagcccggcgccaagcccctggggctgcctcccccggcctccgcc
gcaaccaccttacctcagaggactctccccatgcccggcccggccggccccgcgcccgcg
cccgctgccagcgccgccccggctccccccgtgcccgccgagccccccgtgcccgccggt
gccgccgccgaggcgcgggtgcccacgcactccaaagtggggggctccagggactcgctg
ctggagatgagcacgtcgggggtaggcaggtctcaaaaacagggcgccggagcctactcc
aagtcctacacgctggtgtag
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