KEGG   Agelaius tricolor (tricolored blackbird): 139601328
Entry
139601328         CDS       T10815                                 
Symbol
RAB7B
Name
(RefSeq) ras-related protein Rab-7b isoform X1
  KO
K07898  Ras-related protein Rab-7B
Organism
atrc  Agelaius tricolor (tricolored blackbird)
Pathway
atrc04137  Mitophagy - animal
atrc04140  Autophagy - animal
atrc04145  Phagosome
atrc04148  Efferocytosis
atrc05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:atrc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    139601328 (RAB7B)
   04140 Autophagy - animal
    139601328 (RAB7B)
   04137 Mitophagy - animal
    139601328 (RAB7B)
   04148 Efferocytosis
    139601328 (RAB7B)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    139601328 (RAB7B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:atrc04131]
    139601328 (RAB7B)
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:atrc04031]
    139601328 (RAB7B)
Membrane trafficking [BR:atrc04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    139601328 (RAB7B)
GTP-binding proteins [BR:atrc04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    139601328 (RAB7B)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 RsgA_GTPase SRPRB cobW PduV-EutP ATP_bind_1 VapE-like_dom AAA_14 MMR_HSR1_Xtn AAA_22 GPKOW_C nSTAND3
Other DBs
NCBI-GeneID: 139601328
NCBI-ProteinID: XP_071306383
LinkDB
Position
Unknown
AA seq 218 aa
MDASKKVDLKIIIIGALGVGKTSLLHQYVHKKFYEDYRTTLGASILTKVLPVDSTPLKLQ
IWDTGGQERFRSMVSTFYKGSDGCMLAFDVTDRESFEALDNWRDDFLEKVIPREQDFPMV
VLGNKIDLSDRQVSKEMASAWCKEKDIPYFEVSAKNNINVAEAFETLAKQALSTKGLAVR
HQPQDTRIFQRKRIYCSIIRRNKVLPASKALSGFRGRS
NT seq 657 nt   +upstreamnt  +downstreamnt
atggatgccagcaagaaggtggatctgaagatcatcatcatcggagctctgggtgtgggc
aagacctccctgctgcaccagtacgtgcacaagaagttctacgaggattatcgcaccacg
ctgggcgccagcatcctcaccaaggtcctgcccgtggacagcacccccctgaagctgcag
atctgggacacagggggacaggagcggttccggtccatggtgtcgaccttctacaaaggc
tcagacggctgcatgctggcctttgacgtgacagacagggagtcctttgaggccctggac
aactggagagatgatttcctggagaaggtcattcccagggagcaggatttccccatggtg
gtgctggggaacaagatagacctcagtgaccggcaggtgtccaaggagatggcctcagcc
tggtgcaaggagaaggacatcccctatttcgaggtcagtgccaagaacaacatcaacgtg
gccgaggctttcgagaccctggcgaagcaggcgctgagcacgaaaggactcgcagtgaga
catcagccacaggacacccgaatctttcagagaaagagaatttattgctccattatcaga
agaaacaaagttcttcctgcctcaaaggcgctgtcaggattcagaggaagaagctga

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