Agelaius tricolor (tricolored blackbird): 139601418
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Entry
139601418 CDS
T10815
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139601418 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
atrc04515
]
139601418 (NFASC)
Cell adhesion molecules [BR:
atrc04515
]
Immunoglobulin superfamily
L1 family
139601418 (NFASC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_5
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
139601418
NCBI-ProteinID:
XP_071306574
LinkDB
All DBs
Position
Unknown
AA seq
1368 aa
AA seq
DB search
MIPRRAQATCAGIAFALCLQHLVSAIEVPLDPNIQSELPQPPTITKQSIKDYIVDPRDNI
FIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHSGGRPDDYEGEYQCF
ARNDYGTALSSKIHLQVSKSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPEPVIFWMSSS
MEPIPQDKRVSQGHNGDLYFSNVLAQDALTDYSCNARFHFTHTIQQKNPYTLKVKTKKSH
NETSLGNSPAMYRARGISETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYK
KGGELPVGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDE
PENLILAPGEDGRLVCRANGNPKPSIQWLVNGEPIESSPPNPSREVAGDTIVFRDTQIGS
SAVYQCNASNEHGYLLANAFVSVLDVPPRILGPRNQLIRVIQNNRTRLDCPFFGSPIPTL
RWFKNGQGSTLYGDNYKTHENGSLEMFMARKEDQGIYTCVATNILGKAEAQVRLEVKDPT
RIVRGPEDQVVKRGTMPRLHCRVRHDPTLRLMVTWLKDDAPLYLGNRMKKEEDGLTIYGV
TEKDQGDYTCVASTELDKDLAKAYLTVLAIPANRLRDLPKARPDQPRDLELTDLAERSVR
LTWIPGDDNNSPITDYIVQFEEDRFQPGVWHDHSRYPGSVNSAVLSLSPYVNYQFRVIAV
NDVGSSVPSAPSERYQTNGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIV
RWRRRDPRGSWYNETVRGARHVVWNTPIFVPYEIKVQAENDFGRAPEPDTYIGYSGEDYP
KAAPTDVRIRVLNSTAIALTWTRVHLDTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQFVS
FPGDRNRGIVSRLFPYSNYKLEMVVTNGRGDGPRSEMKEFPTPEGVPSAPRYLRIRQPNL
EIINLEWDHPEHPNGIITGYTLQYTPFNGSRMGRTVVENLSPNQTRFTLQRSDPISRYRF
RLRARTQVGEGEILMEDSPALLDEATPSPEATGPPPTAVEETSPETSPETTPETSPTTSP
TTSPTTTPTTTDTTTTTTTTTATTTTTSTAASTAASTSAAAERAPAATTRHELAANGSSI
WDIRAMANSNWANITWSHNFSAGTDFVVKYITSNKTEKSIPVKAQGPSSVQLADLTPGMM
YKLWVFPIWSHPSEHSYITFTTSSAYTKNQVDIATQGWFIGLMCAIALLVLILLIVCFIK
RSRGGKYPVRDNKDEHLNPEDKNVEDGSFDYSDEDNKPLPNSQTSLDGTIKQQESDDSLV
DYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgatcccaaggagagcccaggccacctgcgccggaattgccttcgccctctgcctccag
cacctcgtcagcgccatcgaggtccccctggacccaaatatccagagtgaattgccgcag
ccccccacgatcaccaagcaatccatcaaggattacatcgtggatcccagggacaacatc
ttcatcgaatgcgaagccaaaggcaaccccgttcccaccttttcctggacgcggaatggg
aagttcttcaacgtggccaaggatcccaaggtgtccatgagaaggagatcggggactttg
gtcatcgacttccacagcgggggccggcccgacgactacgagggcgagtaccagtgcttc
gccaggaacgactacggcacggccctttccagcaaaatccacctccaggtttccaaatct
cctctgtggcccaaggagaaggtggatgtgatcgaggtggatgagggggccccgctgagc
ctgcagtgcaatcccccgcccggcctccccgagcccgtcatcttctggatgagcagctcc
atggagccgatcccgcaggacaagcgcgtgtcccaaggccacaacggggacctttacttc
tccaacgtgctggcgcaggacgcgctgaccgactacagctgcaacgcccgcttccacttc
acccacaccatccagcagaagaacccctacaccctcaaggtcaaaaccaagaagtcccat
aacgaaacgtccttaggaaattcccccgccatgtaccgcgcccgagggatctcagaaacc
actcccagcttcatgtatccctacggaacttccagcagccagatggtgctccgaggggtg
gatctcctgctggaatgcatcgcctctggagtaccagcgccggacatcatgtggtacaag
aaaggcggggagctcccggtgggtaaaaccaagctggagaacttcaacaaggccctgcgc
atctccaacgtgtccgaggaggactccggggagtatttctgcctggcctccaacaagatg
ggcagcatccgccacacgatctcggtgagagtgaaggctgctccctactggctggatgag
ccggagaacctgatcctggcgcccggtgaggatggcaggctcgtgtgccgggccaacggc
aaccccaaaccctccatccagtggctggtgaacggagagcccatcgaatcgtctccgccc
aacccgagccgggaggtggccggggacaccatcgtgttccgggacacgcagatcggcagc
agcgccgtgtaccagtgcaacgcgtccaacgagcacggctacctgctggccaacgccttc
gtcagcgtgctggatgttcccccccggatcctgggcccccggaaccagctgatcagggtg
atccagaacaacaggacgcgcctggattgtcccttttttgggtcccccatccccaccctg
cgctggtttaagaacggccaggggagcacgctgtatggagacaactacaaaacccacgag
aacgggagcttggagatgttcatggctcggaaggaggaccagggaatctacacctgcgtg
gccaccaacatcctgggcaaagctgaggcccaggtccgcctggaggtcaaagaccccacc
aggatcgtgaggggccccgaggaccaggtggtgaagaggggcaccatgccccggctccac
tgccgcgtcaggcacgaccccacgctgcgcctcatggtgacctggctcaaggacgatgcc
cccctgtacctggggaacaggatgaagaaggaggaggatggtctgacgatctatggagtg
actgagaaggaccagggggattacacgtgtgtggccagcacggagctggacaaggacttg
gccaaggcctatctcaccgtgctggccatccctgctaatcggttgagagatttacccaaa
gcacgacctgaccagccccgggacttggagctgacggatctggccgagaggagcgtgcgg
ctgacgtggatccctggggatgacaacaacagccccatcacagactacattgtgcagttt
gaggaggatcgcttccagcccggagtgtggcacgaccactccaggtaccccgggagcgtc
aactcggccgtgctgagcctgtccccgtacgtgaattaccaattccgggtgattgccgtc
aacgacgtgggcagcagcgtgcccagcgcgccctccgagcgctaccagaccaacggggca
cgtcctgaaataaatccaacaggagttcaaggggcagggacccaaaaaaacaacatggag
ataacgtggacccctctgaacgcaacgcaggcttacgggcccaacctgaggtacatcgtg
cggtggcggcggcgggacccgcgcgggagctggtacaacgagaccgtgcggggcgcgcgg
cacgtggtgtggaacacgcccatcttcgtcccctacgagatcaaggtgcaggccgagaac
gacttcggcagagcccccgagcccgacacctacatcgggtactccggggaggattatccc
aaggctgcgcccacggatgtcaggatcagagtgttaaacagcactgccatagctctgacc
tggacacgggtgcacctggacaccatccagggacagctcaaggagtaccgagcctatttc
tggagagacagcagcttgctgaagaacctgtgggtctccaaaaaacggcagtttgtgagt
tttcctggagaccgcaaccggggcatcgtgtcccggctgttcccttacagcaactacaag
ttggagatggtggtcaccaacggccgaggggacgggccccgcagcgaaatgaaggaattc
cccacccctgaaggagtgcccagcgcccccaggtacctgcggatccgacagcccaacctg
gaaatcatcaacctggagtgggatcaccccgagcaccccaacgggatcatcacgggatac
accctccagtacacgccctttaacgggtcccggatgggcaggacggtggtggagaacctg
tcccccaaccagacgaggttcaccctgcagaggtcagaccccatctcccgctaccgcttc
aggctccgcgcccgcacccaggtgggagagggagagatcctgatggaggattcaccagcg
ctgctggatgaagccacgccaagcccagaggcaactgggccgcctccaaccgcagtggag
gaaaccagtccagaaaccagtccagaaaccactcctgaaaccagtcctacaaccagtcct
acaaccagtcctacaaccaccccaaccaccaccgacaccacaaccacaacaaccaccacc
acagccaccacaaccaccaccagcaccgccgccagcaccgccgccagcaccagcgccgct
gccgagagggctccggcagccaccaccaggcacgagttggccgccaatggatcgtccata
tgggacatcagagccatggcaaacagtaactgggcaaacatcacctggagccacaatttc
tcggcaggaactgactttgtggttaagtatatcaccagtaacaagacagagaaatcaatc
cccgttaaggctcagggcccgtcctcggtgcagctggcggatctgacgccggggatgatg
tacaagctgtgggtgttccccatatggtcccaccccagcgagcactcgtacattaccttt
accaccagctcagcctacaccaagaaccaggtggacatcgccacgcagggctggttcatc
ggcctcatgtgcgccatcgccctcctggtgctcatcctcctcatcgtctgcttcatcaag
aggagccgcggcgggaagtacccagtgcgggacaacaaggacgagcacctcaatcccgag
gacaagaacgtggaggacggatccttcgactacagcgatgaagacaacaaacctcttccc
aacagccagacctcgctggacgggacgataaagcagcaggagagcgacgacagcttggtg
gactacggagaagggggcgagggccagttcaacgaggacggctccttcatcggccagtac
acggtcaagaaggacaaagaggagaccgagggcaacgagagctccgaggccacgtccccc
gtcaatgccatttattccttggcatag
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