KEGG   Agelaius tricolor (tricolored blackbird): 139601463
Entry
139601463         CDS       T10815                                 
Symbol
RAB5C
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
atrc  Agelaius tricolor (tricolored blackbird)
Pathway
atrc04137  Mitophagy - animal
atrc04144  Endocytosis
atrc04145  Phagosome
atrc04148  Efferocytosis
atrc05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:atrc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    139601463 (RAB5C)
   04145 Phagosome
    139601463 (RAB5C)
   04137 Mitophagy - animal
    139601463 (RAB5C)
   04148 Efferocytosis
    139601463 (RAB5C)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    139601463 (RAB5C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:atrc04131]
    139601463 (RAB5C)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:atrc04147]
    139601463 (RAB5C)
   04031 GTP-binding proteins [BR:atrc04031]
    139601463 (RAB5C)
Membrane trafficking [BR:atrc04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    139601463 (RAB5C)
 Endosome - Lysosome transport
    139601463 (RAB5C)
Exosome [BR:atrc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   139601463 (RAB5C)
  Exosomal proteins of other body fluids (saliva and urine)
   139601463 (RAB5C)
  Exosomal proteins of colorectal cancer cells
   139601463 (RAB5C)
  Exosomal proteins of bladder cancer cells
   139601463 (RAB5C)
GTP-binding proteins [BR:atrc04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    139601463 (RAB5C)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16
Other DBs
NCBI-GeneID: 139601463
NCBI-ProteinID: XP_071306669
LinkDB
Position
Unknown
AA seq 216 aa
MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQNAPGGPGRNRVVDLQESSQPSRSQCCSN
NT seq 651 nt   +upstreamnt  +downstreamnt
atggcaggtcgaggtggagctgcccgaccgaatggaccagctgctgggaacaaaatctgc
cagttcaaacttgttctcctgggagagtcagcggtggggaagtccagcctggtcctgcgc
ttcgtcaaggggcagttccacgagtaccaggagagcacaattggagctgccttcctcaca
cagacagtgtgtctggatgacacaacggtgaagtttgagatctgggacacggcggggcag
gagcgataccacagcctggcccccatgtactaccggggggcccaggctgccatcgtggtc
tacgacatcaccaacacagacacatttgtacgagccaagaactgggtgaaagagttgcag
aggcaggctagccccaatattgtaattgcactagcaggaaacaaggcagatcttgctaac
aagagagctgtggacttccaggatgcacagacatatgcagatgacaacagcttgctgttc
atggagacgtcagcgaagacagcgatgaatgtgaatgaaatcttcatggcaatagccaag
aaactgccaaaaaacgaaccccagaacgctcctggtggcccgggcaggaatcgggtggtg
gaccttcaggagagcagccagcccagcagaagccagtgctgcagcaactga

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