Agelaius tricolor (tricolored blackbird): 139601494
Help
Entry
139601494 CDS
T10815
Symbol
CTDP1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atrc01009
]
139601494 (CTDP1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atrc03021
]
139601494 (CTDP1)
Enzymes [BR:
atrc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
139601494 (CTDP1)
Protein phosphatases and associated proteins [BR:
atrc01009
]
HAD phosphatases
Fcp/Scp phosphatases
139601494 (CTDP1)
Transcription machinery [BR:
atrc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
139601494 (CTDP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
PTCB-BRCT
BRCT
RTT107_BRCT_5
LIG3_BRCT
BSH_CusB
Motif
Other DBs
NCBI-GeneID:
139601494
NCBI-ProteinID:
XP_071306711
LinkDB
All DBs
Position
Unknown
AA seq
999 aa
AA seq
DB search
MEERPERGSGPGAEGPASVAEIRAPGPRPLRLLEWKVSVGAAVQIGSVLALCAPLPPPPA
PRPAGPAAAPLPPAASGASARPQRGGPERRLRAERPGVVRELCARPGQVIAPGAVLVRLE
GCSHPVVMKGLCAECGQDLTQIRSKNGKQCAPLSTATVSMVHSVPELKVSSEQAEQLGRE
DQQRLHRNRKLVLMVDLDQTLIHTTEQHCQQMSNKGIFHFQLGRGEPMLHTRLRPHCKEF
LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRDLFP
CGDSMVCIIDDREDVWKFAPNLITVKKYVYFQGIGDINAPPGSREMQMKKKANHSAKPEA
LDSAVISAKDVEELKDVICVEEHSNGLKKTAKDTCTANGSTSVSSETSDGDVNSHNKVNA
QDSLNDNTGHKMDNEVTDDLANTKESQIFSEQVDTTVIEKQQTQEKITNDLDFELSSDSE
SDDGLDTKKSSTSVSDSENEEKRSWKKSEQPLQDENLQQKGCTDVSGKKDDLVNHSGETQ
SLPSEIIQDKIDHEAQEESEQESLCDLGNGSGDKKEAETESQISEQSGITMGESLDQSME
EEEEEDDTDDDDHLIYLEEILVRVHTDYYTKYDKYLKKEIEEIPDIRKIVPELKSKVLAD
VTIIFSGLYPTNFPIEKTREHYHATALGAKIVKNLVLSADDPDKATHLIAARTGTEKVRQ
AQDCKDLHVVNPDWLWSCLERWDKVEEQLFPLKDDYIKTHRENSPATFPDTPSTFQTALF
HPTPIHPKSQPGPEVRIYDPNTGKLIRKGTQTSGQSVYIQSPAPPITLPVHGEHSSFRVV
QPHQQQIFEEDDLPASESEEQPGPSKRKRQPSMSETMPLYTLCKEDLESMDKEVDDILGE
GSDESDTEKKKPEEEGEKPQTSTTETLGRKADQRPGSSSSSSSERSLTGSVPRGHKRKLD
EDDAASESSKESSNEDEEGSSSEADEMAAALEAELNDFM
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcggccggagcggggcagcgggcccggcgcggaaggcccggcgtcggtggcg
gagattcgcgctcccggtccgcggccgctgcgtctgctggagtggaaggtgtcggtgggg
gcggcggtgcagatcgggtcggtgctggcgctctgcgccccgctgccgccgccgcccgcc
ccgcgccccgccggccccgccgccgccccgctgccgcccgccgccagcggcgcctccgcc
cgcccgcagcgcggcggccccgagcgcaggctgcgcgcggagcggcccggcgtggtgcgc
gagctgtgcgcgcggcccggccaggtgatcgcgcccggggctgtcttggtgagactggaa
ggttgcagccatcctgttgttatgaaaggcttgtgtgcagaatgtggccaggatttaact
cagatacgaagcaagaatggaaaacagtgtgcgccattatccacagcaactgtatcaatg
gttcacagtgtcccagaactgaaagttagctctgagcaagctgagcagctgggaagagaa
gatcaacagcgactacatcgaaatagaaaactggtgctcatggtagatttggaccagaca
ttgatccatactacagaacagcactgccagcaaatgtccaataagggaatatttcatttc
cagttagggcgaggtgagcctatgttgcacacacgtttgcgtcctcattgtaaggaattc
ctggaaaaaattgccaagctctatgaattgcatgtttttacttttggcagcagactgtat
gcacatacaattgctggatttttggaccctgaaaagaagcttttttcccatcggatattg
tcaagggatgaatgtattgatccattttctaaaactgggaacctaagagatctctttcct
tgtggagattccatggtttgcatcattgatgatagagaggatgtttggaagtttgcaccc
aatttgataactgtgaagaaatatgtatactttcaggggataggagatattaatgcacct
cctggatcaagagaaatgcaaatgaagaagaaagcaaaccactctgcaaaacctgaggca
ttggattcagcagtgatttcagcaaaagatgttgaagaactaaaggatgttatatgtgta
gaagagcacagtaatggcctcaagaaaactgcaaaggacacttgcactgcaaatgggagt
acttctgtaagcagtgaaacatctgatggggatgtaaactctcataataaagttaatgcc
caggactccttaaatgataacactggtcacaaaatggacaatgaggtcactgatgatttg
gcaaatacaaaagaatctcagattttttcggaacaagttgatacaacagttatagagaag
cagcaaacccaagagaagataacaaatgacttggactttgaactgtctagtgacagtgaa
agtgacgatggattggataccaaaaagtcatccacttctgtatcagatagtgagaatgag
gaaaagagaagttggaagaagtccgaacaacctctgcaggatgaaaatttgcagcaaaag
ggttgcactgatgtgagtgggaaaaaggatgatctggtgaaccattctggggaaacacag
tctttacctagtgaaattattcaggacaaaattgatcatgaagcacaagaggaaagtgaa
caggaaagcctttgtgatttaggaaatgggtctggagacaagaaagaagctgaaacagaa
tctcagattagtgagcagtctggaattacaatgggtgagtccttagaccagagcatggag
gaggaagaggaggaagatgatacagatgacgacgaccatttgatataccttgaggagatc
cttgtgcgagttcacactgattattacacaaagtatgataaatatctgaaaaaagagatt
gaggaaattccagacatcagaaaaatagtaccagaactgaaaagtaaagtcttggcagac
gtaaccatcatatttagcggactttacccgacaaacttccctattgaaaagacacgggaa
cactatcatgccacagcacttggagctaaaattgtgaagaatcttgtacttagtgctgat
gatcctgataaagcaacacatctcatcgcagcaaggacaggcacagagaaagtacggcaa
gctcaggactgcaaggatctccatgttgtaaaccctgattggctgtggagctgtctggag
cgctgggacaaggttgaggaacagctctttcccttaaaggatgactacatcaaaacacac
agagaaaatagccctgccacgtttccagatacacccagcacatttcagactgcattgttt
cacccaacgcccatccatccaaagtctcaacctggtcctgaagttcgaatttatgatcct
aacactggaaagctgatcaggaaaggcacacagacatctgggcagtcagtgtatatccag
tctccagctcctcccatcactttgccagtccacggtgaacactcatccttcagagttgtt
cagccacatcaacagcagatcttcgaagaagatgacctaccagcaagtgaaagtgaagaa
cagcctggtccatctaagaggaaacgccagccaagtatgtctgaaacaatgcccctgtac
acgctatgtaaagaggatttagagagtatggataaagaggtagatgacatcttaggagaa
ggcagtgatgaaagtgatactgaaaaaaaaaagccagaagaggaaggtgaaaaacctcag
actagcacaacagagactctagggaggaaggcagatcagagacctggatcatcatcatcg
tcatcaagtgaaagaagtttaacaggcagcgtacccaggggtcacaagcgcaaactggat
gaagatgatgctgccagtgaatccagtaaagaatccagcaatgaagatgaggaaggaagc
agctctgaagcagatgaaatggcagcagcacttgaagctgaactgaatgacttcatgtga
DBGET
integrated database retrieval system
