KEGG   Agelaius tricolor (tricolored blackbird): 139601586
Entry
139601586         CDS       T10815                                 
Symbol
DHX58
Name
(RefSeq) ATP-dependent RNA helicase DHX58
  KO
K12649  ATP-dependent RNA helicase DHX58 [EC:5.6.2.6]
Organism
atrc  Agelaius tricolor (tricolored blackbird)
Pathway
atrc04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:atrc00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    139601586 (DHX58)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:atrc04054]
    139601586 (DHX58)
Enzymes [BR:atrc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     139601586 (DHX58)
Pattern recognition receptors [BR:atrc04054]
 Cytoplasmic pattern recognition receptors
  RIG-I-like receptors
   139601586 (DHX58)
SSDB
Motif
Pfam: RIG-I_C-RD RIG-I_C ResIII Helicase_C DEAD SWI2_SNF2 AAA_19 AAA_11 AAA_22 cobW TTRAP AlaDh_PNT_C zf-B_box
Other DBs
NCBI-GeneID: 139601586
NCBI-ProteinID: XP_071306816
LinkDB
Position
Unknown
AA seq 674 aa
MELRGYQREAAAPALSGRNSIVWLPTGAGKTRVAVHVCRQHLESRRDGKVAVLVNKVHLV
DQHTEKEFHVLQDTFKVASISGDTSHKTFFADLVKKSDVVICTAQILQNALVSTEEDVHV
ELTDFSLLVIDECHHTHKDAVYNKIMLRYLQRKLRGEQDLPQVLGLTASPGTGGATSFEG
AVEHILQICANLDTEKIALVQDELQHLQSHVPQPKKQYDLCQERSQDPFGEQLKKVMVQI
QQFMEKPDFPRDFGTQVYEQRIVELEKRATEMFCRKTRVCALHLRKYNDALLINDTVRMV
DAFQCLQQFYSSERDEKDPTEQFLSTIFEENRAKLQALAGDHRYENPRLARLEGILREHF
RPLGTSRGIVFTKTRQSAHSLLSWLQSTATLRGQHIRAAVLTGAGYSNQTRHMTQNEQQD
VIKQFRQGALNLLFSTSVAEEGLDIPECNIVVRYGLMTNEIAMMQARGRARAENSVYSVL
AKANTREVTRELLNEDLVELMKRAIQAVQAMPEQEYFQKIQELQRVAVASWLLKESRISE
RRQLHQASAVQLYCINCSRPVCRGSDIRTVEGMHHVNVNPKFGSYYRVSSGKIQFQRTFK
DWEPGCRISCNNCNQDWGMEMLYRQVKLPVLCIKNFVVETPAEKRRYKKWGAVTFPIEAF
DYVEYCSGTYGLSL
NT seq 2025 nt   +upstreamnt  +downstreamnt
atggagctccgggggtaccagcgggaggcggcggccccggccctgagcggccgcaacagc
atcgtctggctgcccacgggggccgggaaaacgcgcgtggccgtgcacgtctgccggcag
cacctggagagccgcagggacggcaaggtggccgtgcttgtcaacaaggtgcacctggtg
gaccagcacaccgagaaggagttccacgtgctgcaggacaccttcaaggtggcgtccatc
agtggggacaccagccacaaaaccttctttgctgacctggtgaagaagagcgacgttgtc
atctgcacagcgcagatcctgcagaatgccctggtgagcacggaggaggacgtgcacgtg
gagctgacagatttctcactgctggtgatagatgagtgccaccacacccacaaggacgct
gtctacaacaagatcatgctgagatacctccagcgcaagctccgtggggagcaggacctg
ccacaggtcctggggctgacggcatcccctggcactgggggggcaacatcctttgagggg
gccgtagagcacatcctgcagatctgtgccaacctggacactgagaagatcgcattggtg
caggacgagttgcagcacctgcagagccacgtcccccaacccaagaagcagtatgacctg
tgccaggagagatcacaggacccctttggcgagcagctgaagaaggtgatggtgcagatc
cagcagttcatggagaagccggatttcccacgggactttggcacacaggtttacgagcag
cgcattgtggagctggagaagagagctacagagatgttttgtcgcaagacgcgggtgtgc
gccctgcacctgcgcaagtacaatgacgctctgctgatcaacgacaccgtgaggatggtg
gacgccttccagtgcctccagcagttctacagctctgagagggatgagaaggaccccacc
gaacagtttctcagcaccatatttgaggagaacagggcgaagctgcaggcgcttgctggg
gatcaccgctatgagaaccccaggctggccaggctggaggggatcctgcgtgagcacttt
cggcccctgggcacttctcgtggcattgtgttcaccaagacaaggcagagtgcccacagc
ctgctgagctggctgcagagcacggccacgctccgtgggcagcacatcagggccgccgtc
ctcaccggcgccggctacagcaaccagaccaggcacatgacacagaatgagcagcaggat
gtgatcaagcagttccgtcagggagccctcaacctgctcttctccaccagtgtggctgag
gagggcctggacatccccgagtgcaacatcgtggtgcgctatgggctgatgaccaacgag
attgccatgatgcaggcccggggccgtgcccgtgctgagaacagcgtctactctgtcctt
gccaaagccaacaccagagaggtgacccgagagctgctcaatgaggacctggtggagctc
atgaagagggcgattcaggcagtgcaagccatgcctgagcaggagtacttccaaaagatc
caggagctgcagagggtggccgtggccagctggctgctgaaggagtccaggatcagcgag
cggaggcagctgcaccaggcgtctgctgttcagctgtactgcatcaactgcagcaggccc
gtgtgccggggcagcgacatccgcaccgtggagggcatgcaccacgtcaatgtcaacccc
aaattcgggtcatattacagagtttcctctgggaaaatacagttccagaggactttcaag
gactgggagcccggctgccgcatttcctgcaacaactgcaaccaggactggggcatggag
atgctgtaccgccaggtgaagctgcctgtcctctgcatcaaaaactttgtggtggagaca
ccagcagagaagaggaggtacaagaagtggggggctgtgacattccccatcgaggccttt
gactacgtggagtactgctctggcacctacggcctgtccttgtag

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