Agelaius tricolor (tricolored blackbird): 139601928
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Entry
139601928 CDS
T10815
Symbol
CPSF4L
Name
(RefSeq) putative cleavage and polyadenylation specificity factor subunit 4-like protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03015
mRNA surveillance pathway
atrc05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139601928 (CPSF4L)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
139601928 (CPSF4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atrc03021
]
139601928 (CPSF4L)
03019 Messenger RNA biogenesis [BR:
atrc03019
]
139601928 (CPSF4L)
Transcription machinery [BR:
atrc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
139601928 (CPSF4L)
Messenger RNA biogenesis [BR:
atrc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
139601928 (CPSF4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_12
zf-CCCH_4
zf-CCCH_2
zf-CCCH_RBM22
zf-CCCH_3
zf-CCCH_DUS3L
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
139601928
NCBI-ProteinID:
XP_071307432
LinkDB
All DBs
Position
Unknown
AA seq
147 aa
AA seq
DB search
MGQAGSDRAVPGVQGHPRPGRAKPAVCKHWLRGLCKRGDGCDFLHDYDATRVPECYFYSR
FGECSSKDCPFLHGGASTGGCPWYDRGFCWHGPLCKYKHTRRVMCANYLVGFCPEGPKCK
FVHLKAGLMTSSTDPSKVKLLSLCPRG
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgggacaggctggcagtgacagagctgtcccaggtgtccagggccacccccggcccggc
agagccaagcccgccgtgtgcaagcattggctgcgagggctctgcaagaggggcgacggc
tgcgacttcctgcacgactacgatgccaccagggtgcccgagtgctatttctactccagg
ttcggggagtgcagcagcaaggactgtcccttcctgcacgggggtgccagcaccggcggc
tgtccctggtacgaccggggcttctgctggcacggtcccctgtgcaagtacaagcacacg
aggagggttatgtgtgccaactacctggtgggcttctgccccgagggacccaagtgcaaa
ttcgtgcacctcaaggccgggctgatgacgagcagcacagacccatccaaggtgaagctg
ctgtccctgtgcccacgggggtga
DBGET
integrated database retrieval system
