Agelaius tricolor (tricolored blackbird): 139602102
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Entry
139602102 CDS
T10815
Name
(RefSeq) scaffold attachment factor B1-like isoform X1
KO
K25092
scaffold attachment factor B
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atrc03041
]
139602102
Spliceosome [BR:
atrc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
139602102
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SAP
RRM_5
Motif
Other DBs
NCBI-GeneID:
139602102
NCBI-ProteinID:
XP_071307724
LinkDB
All DBs
Position
Unknown
AA seq
915 aa
AA seq
DB search
MAESQSAAGLGDFTSLGGAAAFGSEPETRRLSELRVIDLRAELKRRNLDSGGNKSVLMER
LRKAIEEEGGDPDEIPVASELTTKRMPKRTSKGRKPEEEGVEDNGLEENSRDGQEDLEAN
LDTLQDIDMMDISVLDEAEIDNSSAVDCGEDYSPDNILDSLSDNKDNVEAEMKELPDQLT
ENEEDYDEIENNLEASSDLIEMKKMEKLHLEPENEKILDILGETCKSELLNEEPPEAERP
RAQEASNAGPGKRLAEEEDALAAAQLEEDALALDSKSAQALARKEAKRLVVAKGETSEQS
PEEEAPDSEGVVVETLSDQSSKRSQGPQASSGETAEKGAGAEARDSKEDGKRAEDKANSE
ESSPATKESSASEGADQKKSPGEEDRDTKIISKDEKGRSAGSSGRNFWVSGLASTTRATD
LKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTAEEATKCITHLHKTELHGKIISVEK
AKNEPAGKKTSEKKESEAKRETVSERPGGAKRDEKSDQKDDAKKTEDKDEKEKKDKDDQK
SGSSDQSKTIKSGSKGTERTVVMDKSKGEPVISVKTSTTSKDRSVKSQDRKSESRERQGI
VPFDKIKAQRKMREAEQRRTRERRERQQHLQTIREREERERLEIARERLEIERQRLERER
MERERLERERMHIEHERRREQDRIQREREELRRQHEQLRYEQERRSAMRRPYDIDGRRDD
PYWPEAKRMAMNDRYHSDFSRQDRFHDFDHRDRGRYQEHSIDRRDGSRTIMGDRDGQHYP
DERHGGPDRHSRDSRESWGSYGSDRRMSESRGIPPQSRDGRDWGDHSRKFEGHQDRSWQS
SVDGGMIGRDHERWQGGGRGRPGHVMHRGGMSGRGSFMQGGNQSQIMHGGGMQGEGFAGQ
DRANRPNDPRFNRRY
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagtcaatcagcggccggactgggggatttcacatcccttggtggggccgcg
gcttttggttcggaacctgaaacccggcggctgagcgagctgcgagtcatcgacctgcgg
gctgagctcaagcggcgtaacctggacagcggcggcaacaagagcgtcctcatggagcgg
ctgaggaaggccattgaggaggaaggaggagatcctgatgaaattccagtggcctcagag
ctgaccacaaagagaatgccaaaaagaactagcaaagggagaaagccagaagaagaaggt
gtggaagacaatggtctggaagaaaactctagagatgggcaggaggatcttgaagcaaac
ctggacaccctgcaggacattgacatgatggatatcagtgtgttagatgaagctgagatt
gataacagcagtgctgtggactgtggggaggattacagtcctgacaacatcctcgactct
ctgtctgataataaagataatgttgaagcagaaatgaaagagcttcctgatcagctaaca
gaaaatgaggaagattatgatgagattgaaaacaatttagaagcctcttcagatttaatt
gaaatgaagaaaatggagaagctacacttggagccagaaaatgagaaaatactcgacatt
ttgggggaaacttgtaaatctgagctacttaacgaagaacctcccgaagcggagcggccg
cgtgcgcaggaagccagtaacgcggggccaggcaagaggctggctgaggaagaggacgct
ctcgctgccgctcagctggaggaagatgctttagctttggacagcaaatcggcccaagct
ttggcaaggaaggaagcaaagcgtttagtggtagcaaaaggggagacaagtgaacagagc
cccgaggaagaggccccggactctgaaggtgtagtggtagagaccctaagcgatcagagt
agcaaacgctcccaaggcccgcaagcctctagtggggagacagcggagaaaggcgcaggt
gccgaagccagagatagcaaagaagatggcaagagagcagaagacaaagctaattctgag
gaatcttcccctgccactaaagagtcctcagccagtgagggcgctgatcagaaaaagagc
cctggtgaggaggacagagatacaaagataatctcaaaagatgagaaaggtcgcagtgct
ggcagttctggtaggaacttttgggtgagtggattggcttccaccaccagagctacagat
ctgaagaatctgttcagcaaatatggcaaggtggtgggggccaaggtggtgaccaacgct
cgcagtcctggcgctcgctgctacggctttgtcaccatgtccacagctgaggaggccacc
aagtgcatcacccacctgcacaagacagagctgcatggcaaaatcatttctgtggaaaaa
gcaaaaaatgaacctgctgggaagaagacaagtgaaaaaaaagagagtgaagcaaagaga
gaaacagtcagtgagagacctggtggtgctaaaagggatgagaaatctgaccaaaaagat
gatgctaaaaagacagaagataaagatgaaaaggaaaaaaaagataaagatgaccagaag
tctggttcatcagatcagtctaaaactattaaatcaggaagtaaaggaacagagagaaca
gtggtcatggataaatccaaaggagaacctgttatcagtgtgaaaacatccactacatca
aaggacagaagtgttaagagccaggaccgcaaatcagagagcagagagagacaagggatt
gtcccctttgacaaaatcaaagcacagaggaaaatgagggaggcagagcagcgccgcacg
cgggagcggcgggagcggcagcagcacctccagaccatccgcgagcgggaggagagggag
aggctggagatcgctcgggagaggctggagatagaacggcagcgcctggagcgggagcgg
atggagagggagaggctggagagggagcggatgcacatcgagcacgagaggaggcgggag
caggaccggatccagcgcgagagggaggagctgcggcggcagcacgagcagctgcgctac
gagcaggagaggagatctgccatgaggagaccctatgacatcgatggcaggagggatgat
ccctactggccagaggcaaagcgaatggccatgaacgaccggtaccactcagacttcagc
cgccaggatcgcttccacgacttcgaccaccgggaccgcggccgctaccaggagcattcc
atagacaggagagatggatccagaacaattatgggagatcgggatggacaacactaccca
gacgagcgccacggaggccccgaccggcactcgagggactcgcgggagagctggggcagc
tacggctccgacaggaggatgagtgagagcagagggatcccccctcagtcacgggatgga
cgtgactggggagatcacagccgcaagtttgaggggcaccaagatcgctcctggcagagc
agcgtggatggagggatgataggacgggatcatgagaggtggcaaggtggcggtagaggc
agacctggccatgtgatgcatcgtggaggcatgtcagggcgtggcagtttcatgcagggt
ggcaatcagagtcagatcatgcacggaggaggaatgcaaggggaaggatttgctggccag
gacagggcaaacagacccaacgatcctcggttcaaccggcgctactga
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