Agelaius tricolor (tricolored blackbird): 139602185
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Entry
139602185 CDS
T10815
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atrc03000
]
139602185
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
atrc03310
]
139602185
Transcription factors [BR:
atrc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
139602185
Nuclear receptors [BR:
atrc03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
139602185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
139602185
NCBI-ProteinID:
XP_071307884
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQEQSGGAKDEPEPLSRV
YTTSVSSGLSDLDDISTLSDGLLFDFPLTPDGSSTYYNLDLLASAQPSPDQSSLDVADAT
LIKQESLYELMLEPALLAHGALEGAQLPPDISVLEIDRVAQNVVKSHLETCQYTTEELKR
LAWSLYSPEEVRALQSKSCEAMWQQCSLQISNAIQYVVEFAKRIDGFMELCQNDQIILLK
AGCLEVLLIRMIRAFNPLNNTILFEGKFGGMQMFKSLGCDDLIGAVFELGRTLCRLQLSD
EELALFTAAVLLSPDRPWLTESKKVQKLQDKIYVALQHEIQKKHSAEDKLSKMVSKLPLM
KTICNLHLDKLEFFRLLHPETAMNFPPLYKEVFNSELQYSDPRES
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcccaaatcgaagtgatcccgtgcaagatctgcggagacaaatcctcagggatc
cactacggtgtcatcacctgcgaaggctgcaagggtttctttcggaggagccagcagaac
aatgccagctactcgtgctcccggcaaaggaactgcctgatcgaccgcaccaaccgcaac
cgctgccagcactgccgcctgcagaaatgcctggcactgggcatgtcccgcgacgcggtg
aagttcggccgcatgtccaagaagcagcgggacagcctctacgccgaggtgcagaagcac
cagcagagccaggagcagagcggcggcgccaaggacgagcccgagcccctgagccgcgtc
tacaccacgagcgtcagcagcggcctctcggacctggacgacatctccacgctgtccgac
gggctcctcttcgacttccccctgacccctgatggcagcagcacctactacaacctggac
ctgctggcctcggcacagccctcgcccgaccagtccagcctggacgtggctgatgccacg
ctcatcaagcaggaatctctctacgagctgatgctggagccggcgctgttggcacacggg
gcgctggagggtgcccagctgccccctgacatctctgtcctggagattgaccgggtggcc
cagaacgtggtgaagtcccacctggagacgtgccagtacacaacggaggagctgaagcgc
ctggcgtggagcctctactcccccgaggaggtccgtgccctgcagagcaagagctgcgag
gccatgtggcagcagtgctcgctgcagatctccaacgccatccagtacgtggtggagttt
gccaagcgcatcgacggcttcatggagctctgccagaacgaccagatcatcctcctgaaa
gccggttgcctcgaggtgctcctgatccgcatgatccgcgccttcaaccccctgaacaac
accatcctcttcgagggcaagttcggtggcatgcagatgttcaaatctctcggctgtgac
gacctcatcggtgccgtcttcgagctgggcaggaccctgtgccgcctgcagctgtcggac
gaggagctcgccctcttcactgctgctgtcctgctctccccagaccgcccatggctgacc
gagtccaagaaggtgcagaagctccaggacaagatctatgtggccctgcagcacgagatc
cagaagaaacactccgctgaggacaagctctcgaagatggtttccaagctgcccttgatg
aagaccatttgcaacctgcacttggacaagctggaatttttccgtctcctgcacccggag
actgccatgaacttcccccccctctacaaggaggttttcaactctgagcttcagtacagc
gacccccgggagagctaa
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