Agelaius tricolor (tricolored blackbird): 139602231
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Entry
139602231 CDS
T10815
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M-like isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139602231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atrc03041
]
139602231
Spliceosome [BR:
atrc03041
]
Common components
Common spliceosomal components
hnRNP proteins
139602231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_MARF1
RRM_5
RRM_3
Motif
Other DBs
NCBI-GeneID:
139602231
NCBI-ProteinID:
XP_071307980
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MEESMKKAAEVLNKHSLGGRPLKVKEDPDGEHARRAMQKVMAAGGMGIGPGPGGPGMINI
PPSILNNPNIPNEIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK
DGKSRGIGTVTFEQAIEAVQAISMFNGQLLFDRPMHVKMDERAFPKGDFFPPERPQQLPH
GLGGIGMGLGPGGQPIDANHLNKGMGMGNMGPGGMGMEGMGFGMNKMGGMEGPFGGMENI
GRFPGGMNMGRMSGRRGLEMDRAMGGGFEREFGRNEMGMSRSFGETLERGIGGGNASIPG
IERMAPGIERMGSGIERLPAGMGHGMERVGSDIDRMGLVLDRMGSNVERMGSGMERMAPL
GIDHLAPNLERMGPGMERMGPGMERMGSGIGFGIERMGAAIERVGGAMDRMGSGVERMGA
GMDRMGIGLERMVPAGMGTGMGQVIERMPAGLERIGGPPMDRIGIERMGAAPMDRMGLER
IGATNMERMGPPMGQGMGAGMERMGLPMGSNFERPMDMERGNFAGNFAGSLGGAGGPAPG
VARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVRFESPEVAER
ACRMMNGLQLRGREIDVRIDRNA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagcatgaagaaggctgctgaagttctgaacaaacacagtcttggtgggaga
cccctgaaagtgaaagaagaccccgacggggagcacgccaggagggccatgcagaaggtg
atggcagcaggagggatgggcatcgggcccggccctggcggccctggcatgatcaacatc
ccccccagcatcctgaacaaccccaacatccccaacgagatcatccacgccctgcaggcc
ggccgcctcggcagcaccgtcttcgtggccaacctggactacaaggtgggctggaagaag
ctgaaggaggtgttcagcatggctggggtggtggtgagggcagacatcctggaggacaag
gacggcaagagccgcggcatcggcaccgtcaccttcgagcaggccatcgaggccgtgcag
gccatctccatgttcaatgggcagctgctctttgacagacccatgcacgtcaaaatggat
gaacgagccttccccaagggagatttcttccctccagagcgaccccaacaactccctcat
ggtcttggtggtattggcatgggattaggacctggaggtcaacctattgatgcaaatcat
ttaaacaaaggcatgggaatgggcaacatgggacctggaggaatgggaatggaaggcatg
ggctttggaatgaataaaatgggaggcatggaaggtccctttggtggcatggagaacatc
ggccgcttccccggcgggatgaacatgggcaggatgagcggtaggcgcggcctcgagatg
gatcgagccatgggagggggatttgagagggagtttggaagaaatgagatgggaatgtcc
cggagttttggagagaccctggagaggggaataggtggtggcaacgccagcattcccggc
atcgagaggatggcccccggcatcgagcgcatgggctcgggcatcgagcggctcccggcc
gggatggggcacggcatggagcgggtgggctcggacatagacaggatggggctggtgctg
gaccgcatgggctccaacgtggagcgcatgggctcgggcatggagcgcatggcgccgctg
ggcatcgaccacctggcgcccaacctggagcgcatggggccgggcatggagcgcatgggg
ccgggcatggagcgcatgggctccggcatcggcttcggcatcgagcgcatgggcgccgcc
atcgagcgcgtgggcggcgccatggacaggatgggctcgggcgtggagcgcatgggggcg
ggcatggataggatgggcatcggcctggagcgcatggtgcccgccggcatgggcacgggc
atggggcaggtgatagagaggatgcccgcggggctggagcgcatcgggggcccgcccatg
gacaggatcgggatagagaggatgggagccgcccccatggacaggatgggcctggagcgc
atcggggccaccaacatggagaggatggggccgcccatggggcagggcatgggggcaggc
atggagcgcatggggctgcccatgggcagcaacttcgagcggcccatggacatggagcgg
ggcaacttcgcagggaattttgcagggtccctgggaggagccggaggccccgcgcccggc
gtggcccggaaagcctgtcagatatttgtgagaaatctaccttttgattttacatggaaa
atgctgaaagataaattcaatgaatgtggccacgtgctctatgctgacatcaagatggag
aacggcaagtccaagggctgcggcgtggtgcgcttcgagtcgcccgaggtggcggagcgc
gcgtgccgcatgatgaacgggctgcagctgcgcggccgtgagatcgacgtgcggatcgac
cgcaacgcctag
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