Agelaius tricolor (tricolored blackbird): 139602445
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Entry
139602445 CDS
T10815
Symbol
SYNPO2
Name
(RefSeq) synaptopodin-2
KO
K24066
synaptopodin-2
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139602445 (SYNPO2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
atrc04990
]
139602445 (SYNPO2)
Domain-containing proteins not elsewhere classified [BR:
atrc04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
139602445 (SYNPO2)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
Calsarcin
PDZ_2
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
139602445
NCBI-ProteinID:
XP_071308405
LinkDB
All DBs
Position
Unknown
AA seq
1273 aa
AA seq
DB search
MLPNCAGKMGTGDYLCIAMSGGAPWGFRLQGGKEQKQPLQIAKVRSKSKAAKAGLCEGDE
VVSINGKPCGDLTYAEVIVLMESLTDVLQMLIKRSSSGINETLNAERENGKHENIKIEDY
GENTTLQMNTEQEIPHGDLCITEIYSGTHHGAQESNTHFAETKQETTQSHRIPPKVIATP
KVIVTDEAGVRGVAEEGPGAMVELQVSLSNDAHKATSAPAVTLLGAEKFPPSSRGPSAQQ
GGSSPLIAVPLAVKEGNIQWSNKVVHFSSSKEVKRIQGAAPSIPRVEVILDCSDREQEAP
RSPSERGCVDSQVEGGQSEAPPSLLSFAISAEGTVQGEDSKHSEKEHRPLKHRARHARLR
RSESLSEKQVKEAKSKCKSIALLLTAAPNPNSKGVLMFKKRRQRARKYTLVSYGTGELER
DEDEEEEGEGEEGDKENTFEVSLLATSESEIDEDFFSDIDKDGKIVTFDWDSGLLEVEKK
TKSGEEMQTLADSTGKGALMFAKRRQRMDQITAEQEELKASTVQTEEHRESTVTENFQKV
SSSVYQSKEEEMSRQQSCVSKSYTDVSQNHSKVVQQNGFGLAPGTNLSFQSSGTQKAASL
NKTAKPFPSGVQNRAAAPFSPVRNVTSPLSDAAAPPPYCSVSPPAEAFYRPVSAPVASKA
APPAWAATEPTEHIASRDERIAVPAKRTGILQEAKRRSTSKPMFNFKDAPKVSPNPALLS
LVHNAEGKKGTGAGFESGPEEDYLSLGAEACNFMQTQASKQKAPPPVAPKPSLKVSPSAS
SPVSPVWSPSAAASNKPPSFPAPASPQAAYPAPPKSPQYPHSPIHPPSTLDLAGPFKGPQ
ASLASPNLAPKATPVTPSSGETKPPFEMPPAMSGKGAQLFARRHSRMEKYVVDSETVQAN
MARAASPTPSLPASWKYSSNVRAPPPVAYNPIHCPSYPPAATKPSSKAPAATKNTKRKPK
KGLNALDIMKHQPYQLDPSLFTFQPPKESLALKQTSKLSPSKQTLPLPSYLPPGAGSPTR
ARPSSVYSVPAYGSQPSFPSNASLPGNESFSPTGYSVFSKPETTTSSLFTAPRPKFSAKK
AGVTAQGRSTGRSLSLPGRPSSFIPRAMSPTSPLVFQPAPDYFSKPDTAADKPGKRLTPW
EAAARSPLGLVDEAFGPQSMQESVAANVVLAARRKTLPEPPDEWKLKVSYEPPAPSGSVA
SLGGKQSGVLSPQKSSLSAPSAPQAGPKLQYPYCTQRSTTDPDIMSMDSRSDYCLSTADS
NYNPQPRGWRRPT
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccaactgcgccgggaaaatgggcacaggggattatctctgcattgctatgagc
ggaggggcgccgtggggcttcaggctgcaagggggcaaggagcagaagcagcctttgcaa
atcgccaaggttcgcagcaaaagcaaagcagccaaggctggactgtgtgagggggatgag
gtggtgtctatcaatggcaagccttgtggagacctgacctatgctgaagtcattgttctg
atggaaagcctgactgacgtcctgcagatgcttatcaagagatcctccagtggaataaat
gaaaccttgaacgctgaaagagaaaatgggaagcacgagaacataaaaattgaggactat
ggggagaacaccacactgcaaatgaacacagagcaagagataccccacggagatttatgc
atcacagagatttacagtgggactcaccacggagcacaagaaagcaacacacactttgct
gaaacaaaacaagagaccacacaaagccacagaattcctcctaaagtgatagccacccct
aaagtgatcgtgacagatgaggctggtgtcagaggggtggcagaagaagggccaggtgcc
atggttgagctgcaggtgtccctctcaaatgacgcccacaaggccaccagtgctcctgct
gtgactctcctgggggcagagaagttccccccttcaagcagaggccccagtgcacagcag
ggtgggagcagccccctcatcgcagttcccctggctgtgaaggagggcaacatccagtgg
tcaaacaaagtagtccacttttctagcagcaaggaggtcaagaggatccaaggtgcagct
ccatctatccccagggtggaggtgatcctggactgctcagacagggagcaggaagcgccc
aggtctccatctgaaagggggtgtgttgattctcaagtggaaggagggcagtcagaagca
cctccttccctcctctcctttgcaatctcagcagaaggcacagtgcagggagaagacagc
aagcactcagaaaaggagcacagacctctcaagcacagggcaaggcacgcaaggctccga
cgaagcgagagcctgtcggagaagcaggtgaaagaggccaaatctaaatgtaaaagcatt
gcactgctgctgacagcagctcccaaccccaattccaagggggtgttgatgttcaagaag
cgccgccaaagggcgaggaaatacactttagtcagctacgggactggggagttggaacgt
gacgaggacgaggaggaagagggtgaaggtgaagagggggacaaggaaaacacttttgag
gtgagtttgcttgcaacaagtgagtcagaaatagatgaagattttttctctgacattgac
aaggacggcaagatcgtgacatttgactgggacagtggtctgctcgaggtggaaaagaag
acaaaaagtggagaggagatgcagacacttgcagacagcacagggaaaggggccctcatg
tttgccaagaggcggcagaggatggatcagattacggcagagcaagaggagctgaaggca
agcacagtgcagacagaggagcacagggaaagcaccgtgacagagaacttccagaaagtg
agctcttccgtctatcagtcaaaagaggaggaaatgtcaagacagcagagttgtgtgagc
aaaagttacacagacgtgagccagaatcacagcaaagtggtacaacaaaatggctttggc
ttagcacctggcacaaacctctcttttcagtcctctggaactcaaaaggcagcatctttg
aataaaacagcaaaacccttcccttctggagttcaaaaccgagcagctgcaccattttca
cctgtaagaaatgtcaccagtcccctttcagatgcagcagcaccacctccttactgctct
gtcagcccaccagctgaggctttctacagacctgtctcagctcctgtggccagcaaggct
gccccgcccgcatgggcagccacggagcccacggaacacatcgcgtccagggatgaaagg
attgccgtgccagccaaaagaactgggatattgcaggaggcaaagagaagaagcacttcc
aaacccatgttcaatttcaaggacgcacccaaagtaagtcctaatcctgccctgttgtcc
cttgtacacaatgcagaaggcaaaaaagggaccggagctggtttcgagtcaggacccgaa
gaagactacctcagtttgggagcagaagcttgcaatttcatgcagactcaagcatctaaa
caaaaggcccctcctcctgttgctccaaagccttcactcaaggtgtctccttctgctagt
tctccagtttcaccggtttggtcaccttcagctgcggcttccaacaagcctccctctttc
ccggcaccagcctcacctcaggcagcgtatcctgcaccacccaaatctccacagtatcct
cattctcccatccatcccccaagcactctcgaccttgctggtcctttcaaagggcctcag
gccagcctggcgagtccaaaccttgcccccaaggcaacaccagtcaccccaagctctgga
gaaacaaagcctccctttgagatgccaccagctatgagtgggaaaggagcacagctgttt
gccaggaggcattcccgaatggagaagtatgtggtggattcagagactgtgcaggcaaac
atggcacgagcagcatctccaactccatctttaccagcttcttggaaatactcatctaac
gtccgagcacctccacccgtcgcttataatcccatccactgcccatcttaccctcctgct
gctaccaagccttcctctaaagcccctgctgctaccaaaaatacaaaaagaaaacctaag
aaaggtctcaatgctttggatatcatgaaacatcaaccttatcaactcgatccatcttta
tttactttccagcctcctaaggaaagccttgccctgaagcagacatcgaagctgtcccct
tcaaagcaaacactgcctttacccagctaccttccacctggtgctggctctcccacgagg
gcccgaccctcctcggtgtactccgtgccagcctatgggtcccagccttcgttcccgtcc
aacgcctctctcccagggaatgaatcattttcacccacgggctactctgtcttttctaag
ccagaaaccaccacatcctctttgtttactgctccgaggccaaaattttcagccaagaaa
gctggtgtcactgcacagggaaggagcactggccgctcactatcgcttcctgggagacct
tcttcattcatccctcgagccatgtctcctacttctcctcttgtatttcagcctgcccct
gactacttcagcaagccagacacagcagctgacaagcctggcaagagactgactccctgg
gaagcagcagccagatctccccttggcctagtggatgaagcttttggcccccaaagcatg
caggaatccgttgctgctaacgtggtgttggctgctcgcaggaaaacacttcctgagcca
ccagatgaatggaaacttaaagtttcttatgagcccccagccccgagtggtagcgtagcc
tcactgggagggaagcaatcaggggttctgtcaccccaaaaaagctccctgtctgcccca
agtgccccccaggctggccctaagctgcagtatccctactgcactcagcgctccacaacg
gatcccgatataatgtccatggattccaggtctgactattgcttgtcaacagctgattca
aactacaatccacagccaaggggatggaggcgtccaacatga
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