Agelaius tricolor (tricolored blackbird): 139602748
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Entry
139602748 CDS
T10815
Symbol
CHAD
Name
(RefSeq) chondroadherin
KO
K06248
chondroadherin
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04510
Focal adhesion
atrc04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139602748 (CHAD)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
139602748 (CHAD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
atrc00535
]
139602748 (CHAD)
Proteoglycans [BR:
atrc00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
139602748 (CHAD)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRRNT
LRR_14
LRR_9
LRR_LRWD1
LRRCT
Motif
Other DBs
NCBI-GeneID:
139602748
NCBI-ProteinID:
XP_071308969
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MLQTRLHSLSLSLPPVTLLLLLLFPPHLIPDLTMKGSGFLLSVLSLLACFVSTMQACPPS
CHCHGGDLQHVICDNAGLKKIPKVPEQTRLLNLQKNNFPILPTNGFRDMKKLVSLHLQSS
RIKEISTGAFRGLKSLVYLYLTDNQISVIKPGAFDDLSDLTYLYLDKNKIPDLSKGLLSP
LVNLFILHLGSNKIQELKPGVFNGAKDLRWLFLSDNALTNLLPGAMEDVENLAVLHLDKN
QLSSYPVNAMSKLRVLEELKLSHNPIEVIPDNAFQSFGRYLQTLHLDNMKLKKFADNAFA
GVTVLKTAHVENNRLTQLPRNFPFDKMETLTISRNPWHCSCQLAPLRKWLKGNRTRAEDT
CSTPAQHRGQPIRDTPALRSCKLPTKRSRKGSRH
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaaacccggttacactctctctctctctctctcccacccgtcactctcctcctc
ctgcttctcttcccaccacacttaattccagatctgaccatgaaggggtcaggcttcctc
ctcagtgtcctcagcctgctggcatgcttcgtctccaccatgcaggcatgtccccccagc
tgccactgccacggcggagacctgcagcacgtcatctgtgacaacgcagggctgaagaag
atccccaaagtgcctgagcagacacggcttctcaacctgcagaagaacaacttccccatc
ctgccgaccaacggcttccgtgacatgaaaaagctggtgtccctgcacctccagagctct
cggatcaaggagatctccaccggagccttccgggggctcaagagcctggtctacctctat
ctcaccgacaaccagatcagtgtcataaagccaggagcctttgatgatctctctgatctc
acctacctgtacctggacaagaacaagatcccagacctatccaaagggctcctctcccct
cttgtcaacctcttcatcctgcacttgggcagcaataaaatccaggagctgaaaccaggg
gtcttcaatggggctaaagatctgcgctggctcttcctctccgacaacgccctcaccaac
ctcctacctggggccatggaggatgtagaaaaccttgctgtcctccacctggacaagaac
cagctgagcagctaccctgtgaatgcaatgagtaagctgagagtgctggaggaactgaaa
ctttctcataacccaattgaggtcatccctgacaacgccttccagtccttcgggcgatac
ctgcagacactccacctggacaacatgaaactgaagaagtttgcagacaacgcatttgct
ggtgtgaccgtgctgaaaaccgcccacgtggagaacaaccggctcacccaactgccccga
aacttcccttttgacaaaatggagacgctgacaatctcccgaaacccctggcactgcagc
tgccagctggcacctctgcgcaagtggctgaaaggcaaccgcacccgtgctgaggacacg
tgctccaccccagcccagcaccggggacagcccatcagggacaccccggccctccgctcc
tgcaagctgcccaccaagagatccaggaaggggagccgccattaa
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