Agelaius tricolor (tricolored blackbird): 139603020
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Entry
139603020 CDS
T10815
Symbol
SFPQ
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atrc01009
]
139603020 (SFPQ)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atrc03021
]
139603020 (SFPQ)
03041 Spliceosome [BR:
atrc03041
]
139603020 (SFPQ)
Protein phosphatases and associated proteins [BR:
atrc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139603020 (SFPQ)
Transcription machinery [BR:
atrc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
139603020 (SFPQ)
Spliceosome [BR:
atrc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
139603020 (SFPQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
139603020
NCBI-ProteinID:
XP_071309501
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MSRDRFRSRGGGGGGFHRRGGGGGRGGPNHDFRSPPPGMGMGQNRGPMAGGPQGPGGPPG
GGPKPEPPKPPTSTSAPPSSSSSASATTAGPTGSQAGAPPSSALPAGQQPQQQPPVSAPS
SSPSGAQPQSKPSPSPTPAGGPKKGQGQSPGGGPKGPGGPQQGPHKGGPGHRGGPGGEPR
GRGQQHQGQQSLGSQQGSGDRSEKLSDEGFKANLSLLRRPGEKTYTQRCRLFVGNLPADI
TDEDFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRGRQLRVRFAT
HAAALSVRNLSPYVSNELLEEAFSQFGPVERAVVIVDDRGRSTGKGIVEFASKPAARKAF
ERCTEGVFLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPRFAQPGSFEF
EYSQRWKSLDEMEKQQREQVAKNMKDAKDKLESEMEDAYHEHQANLLRQDLMRRQEELRR
MEELHNQEMQKRKEIQLRQEEERRRREEEMMIRQREMEEQMRRQREENYSRMGYMDPRER
DMRMGGAATMNMGDPYASAAQKFPPLGGGGGIGYEANPGVGQAAMSGSMMGSDMRPERFG
QGGAGPVGGQGPRGMGPGTPAGYGRGREEYEAPNKKPRF
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgggatcgcttccgtagccgtggcggcggtggcggcggctttcaccggcgtggc
ggcggtggaggacgcggcggtcccaaccacgatttccgctcgccgccgcccggcatgggc
atgggacagaaccgcggcccgatggcgggtggcccgcaaggcccaggcggtccgccggga
ggaggcccgaaacctgaaccgccgaagccacccacgtccacctctgctccgccttcttca
tcctcctcagcctccgctaccacggcgggacccaccggcagccaggcgggagcgcctcca
tcctctgcgcttcccgcggggcagcagccacagcagcagccgccagtttcggctccttcc
tcgtctccttccggtgcacagccgcaatccaagcccagccccagccccacaccggccggc
ggccctaagaaaggacaaggacagtctcccggcggcggccccaaggggccgggcggcccg
cagcaggggccgcacaagggcggcccggggcaccgcggcgggccgggcggggagccgcgg
ggccgcgggcagcagcaccagggccaacagagcctcgggtcacagcagggctcgggagat
aggagcgagaagctgtcggacgaggggtttaaagcgaacctctctctgctgaggcggccc
ggggagaagacgtacacacagcgctgccggttgtttgttgggaatttgcctgctgatatc
acagatgaagactttaaaagactgtttgccaaatacggggagccgggagaggtttttatc
aacaaggggaaaggctttggattcattaaattggaatctagagctcttgcagaaatcgca
aaggcagagttggacgatacccccatgaggggccggcagctccgcgttcgctttgccact
cacgccgctgccctgtcggtgcggaacctctcaccctacgtgtccaacgagttgctcgag
gaggctttttcccagttcggtccggtggaaagagctgttgtgattgtagatgatcgaggt
agatcaacaggaaaaggcattgttgagtttgcatcaaagccagctgcaaggaaagcattt
gaacggtgtactgagggggtgtttttgttgacaaccactcccaggccagttattgtggaa
ccgttggaacagctggatgatgaagatggtcttccagaaaagcttgctcagaagaatccg
atgtatcaaaaggagagagagactcctccccgttttgctcagcctggcagttttgaattt
gagtattctcaaaggtggaaatctttagatgaaatggaaaagcagcagagagagcaagtt
gcaaaaaatatgaaagatgccaaggacaaacttgaaagtgagatggaagatgcttaccat
gagcatcaggcaaacctcctgcgtcaagacctcatgaggcgccaggaggagctgaggcgg
atggaagaacttcataatcaggaaatgcagaaacgcaaggaaattcagctgaggcaggag
gaggagcgccggcggcgggaggaggagatgatgatccgtcagcgggagatggaagagcag
atgagaagacagagggaagagaattatagtagaatgggttacatggatccaagggagcga
gacatgagaatgggtggtgctgccacaatgaacatgggagatccttatgcttcagcagcc
cagaaatttccacctctgggaggtggtggcggcataggttatgaagctaatccaggagtt
ggccaagcagccatgagtggttctatgatgggaagtgacatgcgtcctgaacgctttggg
cagggaggtgcggggcccgtgggtggccagggtcctagaggaatggggcctggaacacca
gcaggatatggtagagggagagaagaatatgaagccccaaacaaaaagccccgattttag
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integrated database retrieval system
